FFCP PHASE1:Hg19::chr15:59225758..59225837,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79811 | |EntrezGene=79811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20709 | |HGNC=20709 | ||
|TSSclassifier=strong | |||
|UniProt=C9IZZ3,A8K5V8 | |UniProt=C9IZZ3,A8K5V8 | ||
|association_with_transcript=0bp_to_ENST00000249736,ENST00000474342,ENST00000480144,ENST00000484498,ENST00000492526,ENST00000536328,ENST00000557924,ENST00000558486,ENST00000559261,ENST00000559305,ENST00000559880,ENST00000560012,ENST00000560682_5end | |association_with_transcript=0bp_to_ENST00000249736,ENST00000474342,ENST00000480144,ENST00000484498,ENST00000492526,ENST00000536328,ENST00000557924,ENST00000558486,ENST00000559261,ENST00000559305,ENST00000559880,ENST00000560012,ENST00000560682_5end | ||
|cluster_id=chr15:59225758..59225837,- | |||
|description=CAGE_peak_1_at_SLTM_5end | |description=CAGE_peak_1_at_SLTM_5end | ||
|id=chr15:59225758..59225837,- | |id=chr15:59225758..59225837,- | ||
|ontology_enrichment_celltype=CL:0000037!1.88e-42!172;CL:0000566!1.88e-42!172;CL:0002032!1.01e-38!165;CL:0000837!1.01e-38!165;CL:0000988!1.37e-38!182;CL:0000738!5.98e-36!140;CL:0002031!1.26e-33!124;CL:0002087!6.23e-32!119;CL:0000763!5.92e-22!112;CL:0000049!5.92e-22!112;CL:0000860!1.54e-17!45;CL:0000557!1.97e-17!71;CL:0000839!7.16e-17!70;CL:0002057!9.15e-17!42;CL:0000766!3.20e-16!76;CL:0002009!1.07e-15!65;CL:0000542!1.59e-15!53;CL:0000051!1.59e-15!53;CL:0000838!2.28e-15!52;CL:0002194!9.93e-15!63;CL:0000576!9.93e-15!63;CL:0000040!9.93e-15!63;CL:0000559!9.93e-15!63;CL:0000791!5.28e-10!18;CL:0000789!5.28e-10!18;CL:0002420!5.28e-10!18;CL:0002419!5.28e-10!18;CL:0000790!5.28e-10!18;CL:0000084!5.31e-09!25;CL:0000827!5.31e-09!25;CL:0000625!4.19e-07!11;CL:0000134!8.80e-07!358 | |ontology_enrichment_celltype=CL:0000037!1.88e-42!172;CL:0000566!1.88e-42!172;CL:0002032!1.01e-38!165;CL:0000837!1.01e-38!165;CL:0000988!1.37e-38!182;CL:0000738!5.98e-36!140;CL:0002031!1.26e-33!124;CL:0002087!6.23e-32!119;CL:0000763!5.92e-22!112;CL:0000049!5.92e-22!112;CL:0000860!1.54e-17!45;CL:0000557!1.97e-17!71;CL:0000839!7.16e-17!70;CL:0002057!9.15e-17!42;CL:0000766!3.20e-16!76;CL:0002009!1.07e-15!65;CL:0000542!1.59e-15!53;CL:0000051!1.59e-15!53;CL:0000838!2.28e-15!52;CL:0002194!9.93e-15!63;CL:0000576!9.93e-15!63;CL:0000040!9.93e-15!63;CL:0000559!9.93e-15!63;CL:0000791!5.28e-10!18;CL:0000789!5.28e-10!18;CL:0002420!5.28e-10!18;CL:0002419!5.28e-10!18;CL:0000790!5.28e-10!18;CL:0000084!5.31e-09!25;CL:0000827!5.31e-09!25;CL:0000625!4.19e-07!11;CL:0000134!8.80e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.53e-13;33!CL:0002057;2.53e-13;33!CL:0000576;4.07e-11;48!CL:0002087;1.25e-10;104!CL:0000791;5.21e-10;18!CL:0000789;5.21e-10;18!CL:0002419;5.21e-10;18!CL:0000542;1.92e-09;53!CL:0000473;3.03e-09;39!CL:0000234;3.03e-09;39!CL:0000084;6.01e-09;25!CL:0000766;4.55e-08;69!CL:0000738;6.55e-08;136!CL:0000988;1.33e-07;177!CL:0000625;4.25e-07;11!CL:0000763;8.63e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.86e-42,168;CL:0000988,3.57e-39,177;CL:0002032,2.05e-38,161;CL:0000837,2.05e-38,161;CL:0000738,1.02e-35,136;CL:0002031,1.90e-33,120;CL:0002087,9.30e-32,115;CL:0000763,1.05e-21,108;CL:0000049,1.05e-21,108;CL:0000557,2.65e-17,67;CL:0000860,9.15e-17,42;CL:0002057,9.15e-17,42;CL:0000839,9.75e-17,66;CL:0000766,4.87e-16,72;CL:0002009,1.44e-15,61;CL:0000542,1.59e-15,53;CL:0000051,1.59e-15,53;CL:0000838,2.28e-15,52;CL:0002194,1.36e-14,59;CL:0000576,1.36e-14,59;CL:0000040,1.36e-14,59;CL:0000559,1.36e-14,59;CL:0000473,3.36e-14,48;CL:0000234,3.36e-14,48;CL:0000791,5.28e-10,18;CL:0000789,5.28e-10,18;CL:0002420,5.28e-10,18;CL:0002419,5.28e-10,18;CL:0000790,5.28e-10,18;CL:0000084,5.31e-09,25;CL:0000827,5.31e-09,25;CL:0000625,4.19e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.10e-12;42!CL:0000790;5.21e-10;18!CL:0000051;1.92e-09;53 | |||
|ontology_enrichment_disease=DOID:162!2.39e-07!235;DOID:14566!7.43e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.39e-07,235;DOID:14566,7.43e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.44e-18!102;UBERON:0003061!1.44e-18!102;UBERON:0001474!6.82e-15!86;UBERON:0002371!4.08e-14!80;UBERON:0002193!7.66e-14!112;UBERON:0004765!2.69e-11!101;UBERON:0001434!2.69e-11!101;UBERON:0002405!8.85e-08!115 | |ontology_enrichment_uberon=UBERON:0002390!1.44e-18!102;UBERON:0003061!1.44e-18!102;UBERON:0001474!6.82e-15!86;UBERON:0002371!4.08e-14!80;UBERON:0002193!7.66e-14!112;UBERON:0004765!2.69e-11!101;UBERON:0001434!2.69e-11!101;UBERON:0002405!8.85e-08!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.57e-18,98;UBERON:0003061,2.57e-18,98;UBERON:0001474,1.19e-14,82;UBERON:0002371,6.97e-14,76;UBERON:0002193,1.54e-13,108;UBERON:0004765,5.81e-11,90;UBERON:0002405,1.63e-10,93;UBERON:0001434,1.57e-09,100 | |||
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| ||
|short_description=p1@SLTM | |short_description=p1@SLTM | ||
}} | }} |
Latest revision as of 08:19, 18 September 2015
Short description: | p1@SLTM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLTM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000249736, ENST00000474342, ENST00000480144, ENST00000484498, ENST00000492526, ENST00000536328, ENST00000557924, ENST00000558486, ENST00000559261, ENST00000559305, ENST00000559880, ENST00000560012, ENST00000560682_5end |
EntrezGene: | SLTM |
HGNC: | 20709 |
UniProt: | C9IZZ3A8K5V8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.57e-18 | 98 |
blood island | 2.57e-18 | 98 |
bone element | 1.19e-14 | 82 |
bone marrow | 6.97e-14 | 76 |
hemolymphoid system | 1.54e-13 | 108 |
skeletal element | 5.81e-11 | 90 |
immune system | 1.63e-10 | 93 |
skeletal system | 1.57e-09 | 100 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.39e-07 | 235 |
disease of cellular proliferation | 7.43e-07 | 239 |