FFCP PHASE1:Hg19::chr11:57194171..57194188,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:57194171..57194188,-
|short_description=p19@SLC43A3
|description=CAGE_peak_19_at_SLC43A3_5end
|association_with_transcript=36bp_to_ENST00000529554_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29015 | |EntrezGene=29015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17466 | |HGNC=17466 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_ENST00000529554_5end | |||
|cluster_id=chr11:57194171..57194188,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_19_at_SLC43A3_5end | |||
|id=chr11:57194171..57194188,- | |||
|ontology_enrichment_celltype=CL:0002057!5.92e-36!42;CL:0000860!8.77e-33!45;CL:0000557!5.22e-31!71;CL:0000766!9.76e-30!76;CL:0002009!1.14e-29!65;CL:0000839!1.29e-29!70;CL:0002194!2.91e-27!63;CL:0000576!2.91e-27!63;CL:0000040!2.91e-27!63;CL:0000559!2.91e-27!63;CL:0000763!3.05e-22!112;CL:0000049!3.05e-22!112;CL:0000738!1.19e-15!140;CL:0002031!1.58e-14!124;CL:0000037!9.21e-13!172;CL:0000566!9.21e-13!172;CL:0002087!5.58e-12!119;CL:0000988!7.08e-12!182;CL:0002032!9.88e-12!165;CL:0000837!9.88e-12!165;CL:0000134!7.66e-11!358;CL:0000219!1.93e-10!390;CL:0002320!3.20e-10!365;CL:0000048!4.98e-09!430;CL:0000723!1.36e-08!436;CL:0002393!1.44e-08!9;CL:0002397!1.44e-08!9;CL:0000034!4.91e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0002393;6.59e-16;6!CL:0002397;6.59e-16;6!CL:0000860;3.31e-14;33!CL:0002057;3.31e-14;33!CL:0000766;2.82e-12;69!CL:0000576;3.23e-12;48!CL:0000473;3.67e-11;39!CL:0000234;3.67e-11;39!CL:0000182;2.63e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.69e-22,42;CL:0002057,2.69e-22,42;CL:0000473,2.44e-19,48;CL:0000234,2.44e-19,48;CL:0000557,3.07e-19,67;CL:0002009,8.17e-18,61;CL:0000839,2.45e-16,66;CL:0002194,3.40e-15,59;CL:0000576,3.40e-15,59;CL:0000040,3.40e-15,59;CL:0000559,3.40e-15,59;CL:0000766,7.30e-15,72;CL:0000763,2.55e-11,108;CL:0000049,2.55e-11,108;CL:0002393,8.72e-11,9;CL:0002397,8.72e-11,9;CL:0002031,5.17e-10,120;CL:0000738,1.26e-08,136;CL:0000182,2.60e-08,12;CL:0002087,3.61e-07,115;CL:0002032,5.25e-07,161;CL:0000837,5.25e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.94e-27!80;UBERON:0002405!1.18e-26!115;UBERON:0001474!1.47e-24!86;UBERON:0002390!1.91e-24!102;UBERON:0003061!1.91e-24!102;UBERON:0002193!5.39e-22!112;UBERON:0004765!5.48e-20!101;UBERON:0001434!5.48e-20!101;UBERON:0003081!4.67e-16!216;UBERON:0002204!3.04e-12!167;UBERON:0002384!2.36e-10!375;UBERON:0000926!5.87e-09!448;UBERON:0004120!5.87e-09!448;UBERON:0006603!5.87e-09!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.26e-09;19!UBERON:0006925;6.26e-09;19!UBERON:0002423;8.13e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.81e-17,76;UBERON:0002405,7.35e-16,93;UBERON:0001474,1.94e-15,82;UBERON:0002390,5.86e-15,98;UBERON:0003061,5.86e-15,98;UBERON:0004765,6.39e-14,90;UBERON:0002193,2.11e-13,108;UBERON:0001434,2.32e-12,100;UBERON:0002107,6.20e-09,19;UBERON:0006925,6.20e-09,19;UBERON:0008836,6.20e-09,19;UBERON:0003081,1.35e-08,203;UBERON:0002204,5.47e-08,167;UBERON:0008835,9.83e-08,22;UBERON:0003894,9.83e-08,22;UBERON:0009854,2.11e-07,23;UBERON:0007499,8.07e-07,25;UBERON:0009497,8.07e-07,25;UBERON:0000015,8.07e-07,25;UBERON:0002423,8.07e-07,25;UBERON:0006235,8.07e-07,25;UBERON:0004161,8.07e-07,25 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.928896739896456,0,0,0,0,0,0,2.21598163412751,2.80762226458198,4.34021741431704,0,0.32389366601898,0,0,0,0.485168122375632,0.464858073811369,0,1.54853185447552,0.863077176966451,0.768482119587302,0.47296445977717,1.72372840368309,1.93645405075148,1.35426486594342,0.188242339542605,0.545812300115692,0.449446968890169,0.612167784741805,0.962787081228281,0.639337125799041,0,1.19678194572979,0,0.870627715885752,1.13477044938228,0.622822248995575,0.502497330513487,0.521482918420201,1.3031330682307,0.605399502633369,0.368277635987565,0.632924774881769,0.211255286311942,0.637812899895131,0.209658645508376,0.112328631146495,0,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0.476981248610684,0.571994910780128,0,0.198762407366705,0,0,1.13061588384802,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0.168584690078102,0.241011029883482,0,0.435758888184812,0.237270619111097,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0,0,8.87285243752816,7.86261773342101,4.72631925345123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0.414656231081544,1.29707958075265,0.12624243342638,0.190493682876507,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0.540911356951966,0,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.449947783103001,1.5476039091159,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,15.3879845361987,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0,0,0.554805861502613,0,0.251567901752575,0,1.14420034198462,0.151230923763239,0,0.147855149989634,0,0.449803112163605,0.155262956876259,0,0,0,0.450772826991655,0,0,0.545545977607678,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.135939465953663,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,1.2217909337381,0.322289439867886,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0.402547587182052,0 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|phase1_expression=0.726713517082227,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.928896739896456,0,0,0,0,0,0,2.21598163412751,2.80762226458198,4.34021741431704,0,0.32389366601898,0,0,0,0.485168122375632,0.464858073811369,0,1.54853185447552,0.863077176966451,0.768482119587302,0.47296445977717,1.72372840368309,1.93645405075148,1.35426486594342,0.188242339542605,0.545812300115692,0.449446968890169,0.612167784741805,0.962787081228281,0.639337125799041,0,1.19678194572979,0,0.870627715885752,1.13477044938228,0.622822248995575,0.502497330513487,0.521482918420201,1.3031330682307,0.605399502633369,0.368277635987565,0.632924774881769,0.211255286311942,0.637812899895131,0.209658645508376,0.112328631146495,0,0,0,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0.476981248610684,0.571994910780128,0,0.198762407366705,0,0,1.13061588384802,0.419499436209906,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0.168584690078102,0.241011029883482,0,0.435758888184812,0.237270619111097,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0,0,8.87285243752816,7.86261773342101,4.72631925345123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0.414656231081544,1.29707958075265,0.12624243342638,0.190493682876507,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0.540911356951966,0,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.449947783103001,1.5476039091159,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,15.3879845361987,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0,0,0.554805861502613,0,0.251567901752575,0,1.14420034198462,0.151230923763239,0,0.147855149989634,0,0.449803112163605,0.155262956876259,0,0,0,0.450772826991655,0,0,0.545545977607678,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.135939465953663,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,1.2217909337381,0.322289439867886,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p19@SLC43A3 | |||
}} | }} |
Latest revision as of 09:42, 18 September 2015
Short description: | p19@SLC43A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SLC43A3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 36bp_to_ENST00000529554_5end |
EntrezGene: | SLC43A3 |
HGNC: | 17466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.69e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.69e-22 | 42 |
defensive cell | 2.44e-19 | 48 |
phagocyte | 2.44e-19 | 48 |
granulocyte monocyte progenitor cell | 3.07e-19 | 67 |
macrophage dendritic cell progenitor | 8.17e-18 | 61 |
myeloid lineage restricted progenitor cell | 2.45e-16 | 66 |
monopoietic cell | 3.40e-15 | 59 |
monocyte | 3.40e-15 | 59 |
monoblast | 3.40e-15 | 59 |
promonocyte | 3.40e-15 | 59 |
myeloid leukocyte | 7.30e-15 | 72 |
myeloid cell | 2.55e-11 | 108 |
common myeloid progenitor | 2.55e-11 | 108 |
intermediate monocyte | 8.72e-11 | 9 |
CD14-positive, CD16-positive monocyte | 8.72e-11 | 9 |
hematopoietic lineage restricted progenitor cell | 5.17e-10 | 120 |
leukocyte | 1.26e-08 | 136 |
hepatocyte | 2.60e-08 | 12 |
nongranular leukocyte | 3.61e-07 | 115 |
hematopoietic oligopotent progenitor cell | 5.25e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.25e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.81e-17 | 76 |
immune system | 7.35e-16 | 93 |
bone element | 1.94e-15 | 82 |
hematopoietic system | 5.86e-15 | 98 |
blood island | 5.86e-15 | 98 |
skeletal element | 6.39e-14 | 90 |
hemolymphoid system | 2.11e-13 | 108 |
skeletal system | 2.32e-12 | 100 |
liver | 6.20e-09 | 19 |
digestive gland | 6.20e-09 | 19 |
liver bud | 6.20e-09 | 19 |
lateral plate mesoderm | 1.35e-08 | 203 |
musculoskeletal system | 5.47e-08 | 167 |
hepatic diverticulum | 9.83e-08 | 22 |
liver primordium | 9.83e-08 | 22 |
digestive tract diverticulum | 2.11e-07 | 23 |
epithelial sac | 8.07e-07 | 25 |
epithelium of foregut-midgut junction | 8.07e-07 | 25 |
anatomical boundary | 8.07e-07 | 25 |
hepatobiliary system | 8.07e-07 | 25 |
foregut-midgut junction | 8.07e-07 | 25 |
septum transversum | 8.07e-07 | 25 |