FFCP PHASE1:Hg19::chr11:57194550..57194617,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:57194550..57194617,-
|short_description=p1@SLC43A3
|description=CAGE_peak_1_at_SLC43A3_5end
|association_with_transcript=0bp_to_ENST00000395124,ENST000005...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29015 | |EntrezGene=29015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17466 | |HGNC=17466 | ||
|UniProt=Q8NBI5, | |TSSclassifier=strong | ||
|UniProt=Q8NBI5,E9PPE4,E9PKW3,E9PSH9,E9PJL1,E9PJT6,E9PJL3,E7EQD2 | |||
|association_with_transcript=0bp_to_ENST00000395124,ENST00000524863,ENST00000526125,ENST00000528187,ENST00000529494,ENST00000530316,ENST00000533051,ENST00000533245,ENST00000533524,NM_199329,uc001nkh.2,uc009yme.2,uc009ymg.1,uc010rjr.1_5end | |||
|cluster_id=chr11:57194550..57194617,- | |||
|coexpression_cluster_id=C2137 | |||
|description=CAGE_peak_1_at_SLC43A3_5end | |||
|id=chr11:57194550..57194617,- | |||
|ontology_enrichment_celltype=CL:0000763!4.80e-30!112;CL:0000049!4.80e-30!112;CL:0000839!2.89e-23!70;CL:0000557!1.69e-22!71;CL:0002371!2.34e-21!591;CL:0002057!6.65e-21!42;CL:0000766!1.41e-20!76;CL:0002009!2.91e-20!65;CL:0002194!4.31e-20!63;CL:0000576!4.31e-20!63;CL:0000040!4.31e-20!63;CL:0000559!4.31e-20!63;CL:0000037!9.23e-19!172;CL:0000566!9.23e-19!172;CL:0000723!1.08e-18!436;CL:0000048!1.09e-18!430;CL:0000988!1.51e-18!182;CL:0002032!1.54e-18!165;CL:0000837!1.54e-18!165;CL:0000144!3.24e-18!625;CL:0000034!8.69e-18!444;CL:0000219!1.98e-17!390;CL:0000860!5.55e-17!45;CL:0000134!1.21e-16!358;CL:0002320!1.52e-16!365;CL:0000012!2.13e-16!682;CL:0000548!4.23e-16!679;CL:0000004!4.23e-16!679;CL:0000255!4.23e-16!679;CL:0000063!6.82e-13!578;CL:0002031!1.89e-11!124;CL:0000738!8.58e-10!140;CL:0000003!2.02e-09!722;CL:0002087!3.04e-09!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.21e-18;33!CL:0002057;2.21e-18;33!CL:0000473;4.99e-18;39!CL:0000234;4.99e-18;39!CL:0000576;4.93e-14;48!CL:0000763;4.16e-12;100!CL:0000766;8.15e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.92e-34,108;CL:0000049,4.92e-34,108;CL:0000839,5.92e-28,66;CL:0000557,4.84e-27,67;CL:0002009,9.17e-25,61;CL:0000766,1.13e-24,72;CL:0002194,1.15e-24,59;CL:0000576,1.15e-24,59;CL:0000040,1.15e-24,59;CL:0000559,1.15e-24,59;CL:0000473,4.18e-24,48;CL:0000234,4.18e-24,48;CL:0000037,4.96e-21,168;CL:0000860,6.53e-21,42;CL:0002057,6.53e-21,42;CL:0000988,7.48e-21,177;CL:0002032,7.61e-21,161;CL:0000837,7.61e-21,161;CL:0000723,4.84e-20,433;CL:0000048,4.93e-20,427;CL:0000034,4.25e-19,441;CL:0000219,1.04e-18,386;CL:0000134,6.75e-18,354;CL:0002320,8.74e-18,361;CL:0002031,1.67e-13,120;CL:0000738,1.70e-11,136;CL:0002087,4.43e-11,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.57e-15;42!CL:0000049;3.45e-10;108 | |||
|ontology_enrichment_disease=DOID:2531!2.52e-15!51;DOID:0060083!2.52e-15!51;DOID:1240!6.49e-15!39;DOID:8692!8.09e-13!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.27e-12;31!DOID:1240;3.97e-12;39!DOID:2531;1.40e-09;51!DOID:0060083;1.40e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.40e-15,51;DOID:0060083,2.40e-15,51;DOID:1240,6.41e-15,39;DOID:8692,8.01e-13,31 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.62e-22!80;UBERON:0002193!1.73e-20!112;UBERON:0002405!2.98e-20!115;UBERON:0001474!1.29e-19!86;UBERON:0002390!2.35e-19!102;UBERON:0003061!2.35e-19!102;UBERON:0002384!3.07e-16!375;UBERON:0004765!4.98e-16!101;UBERON:0001434!4.98e-16!101;UBERON:0003081!1.06e-15!216;UBERON:0002204!3.16e-15!167;UBERON:0000926!2.51e-07!448;UBERON:0004120!2.51e-07!448;UBERON:0006603!2.51e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,6.22e-27,93;UBERON:0002371,9.88e-27,76;UBERON:0002193,1.07e-23,108;UBERON:0001474,2.59e-23,82;UBERON:0002390,1.24e-22,98;UBERON:0003061,1.24e-22,98;UBERON:0004765,5.07e-21,90;UBERON:0001434,7.58e-19,100;UBERON:0002384,1.97e-17,371;UBERON:0002204,2.01e-17,167;UBERON:0003081,3.35e-16,203;UBERON:0000926,4.85e-14,315;UBERON:0004120,4.85e-14,315;UBERON:0006603,4.85e-14,315;UBERON:0000479,7.27e-10,773 | |||
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| ||
|short_description=p1@SLC43A3 | |||
}} | }} |
Latest revision as of 09:48, 18 September 2015
Short description: | p1@SLC43A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC43A3_5end |
Coexpression cluster: | C2137_CD14_mesenchymal_Melanocyte_chronic_acute_anaplastic_bile |
Association with transcript: | 0bp_to_ENST00000395124, ENST00000524863, ENST00000526125, ENST00000528187, ENST00000529494, ENST00000530316, ENST00000533051, ENST00000533245, ENST00000533524, NM_199329, uc001nkh.2, uc009yme.2, uc009ymg.1, uc010rjr.1_5end |
EntrezGene: | SLC43A3 |
HGNC: | 17466 |
UniProt: | Q8NBI5E9PPE4E9PKW3E9PSH9E9PJL1E9PJT6E9PJL3E7EQD2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.92e-34 | 108 |
common myeloid progenitor | 4.92e-34 | 108 |
myeloid lineage restricted progenitor cell | 5.92e-28 | 66 |
granulocyte monocyte progenitor cell | 4.84e-27 | 67 |
macrophage dendritic cell progenitor | 9.17e-25 | 61 |
myeloid leukocyte | 1.13e-24 | 72 |
monopoietic cell | 1.15e-24 | 59 |
monocyte | 1.15e-24 | 59 |
monoblast | 1.15e-24 | 59 |
promonocyte | 1.15e-24 | 59 |
defensive cell | 4.18e-24 | 48 |
phagocyte | 4.18e-24 | 48 |
hematopoietic stem cell | 4.96e-21 | 168 |
classical monocyte | 6.53e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.53e-21 | 42 |
hematopoietic cell | 7.48e-21 | 177 |
hematopoietic oligopotent progenitor cell | 7.61e-21 | 161 |
hematopoietic multipotent progenitor cell | 7.61e-21 | 161 |
somatic stem cell | 4.84e-20 | 433 |
multi fate stem cell | 4.93e-20 | 427 |
stem cell | 4.25e-19 | 441 |
motile cell | 1.04e-18 | 386 |
mesenchymal cell | 6.75e-18 | 354 |
connective tissue cell | 8.74e-18 | 361 |
hematopoietic lineage restricted progenitor cell | 1.67e-13 | 120 |
leukocyte | 1.70e-11 | 136 |
nongranular leukocyte | 4.43e-11 | 115 |
Ontology term | p-value | n |
---|---|---|
immune system | 6.22e-27 | 93 |
bone marrow | 9.88e-27 | 76 |
hemolymphoid system | 1.07e-23 | 108 |
bone element | 2.59e-23 | 82 |
hematopoietic system | 1.24e-22 | 98 |
blood island | 1.24e-22 | 98 |
skeletal element | 5.07e-21 | 90 |
skeletal system | 7.58e-19 | 100 |
connective tissue | 1.97e-17 | 371 |
musculoskeletal system | 2.01e-17 | 167 |
lateral plate mesoderm | 3.35e-16 | 203 |
mesoderm | 4.85e-14 | 315 |
mesoderm-derived structure | 4.85e-14 | 315 |
presumptive mesoderm | 4.85e-14 | 315 |
tissue | 7.27e-10 | 773 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.40e-15 | 51 |
immune system cancer | 2.40e-15 | 51 |
leukemia | 6.41e-15 | 39 |
myeloid leukemia | 8.01e-13 | 31 |