FFCP PHASE1:Hg19::chr1:2487800..2487845,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8764 | |EntrezGene=8764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11912 | |HGNC=11912 | ||
|TSSclassifier=strong | |||
|UniProt=Q92956,B4DU65,F8WAX0 | |UniProt=Q92956,B4DU65,F8WAX0 | ||
|association_with_transcript=0bp_to_ENST00000355716,ENST00000423768,ENST00000442392,ENST00000475523,ENST00000482074,NM_003820,uc001ajr.2,uc001ajs.2,uc001ajt.1,uc009vlf.1,uc010nzc.1_5end | |association_with_transcript=0bp_to_ENST00000355716,ENST00000423768,ENST00000442392,ENST00000475523,ENST00000482074,NM_003820,uc001ajr.2,uc001ajs.2,uc001ajt.1,uc009vlf.1,uc010nzc.1_5end | ||
|cluster_id=chr1:2487800..2487845,+ | |||
|description=CAGE_peak_2_at_TNFRSF14_5end | |description=CAGE_peak_2_at_TNFRSF14_5end | ||
|id=chr1:2487800..2487845,+ | |id=chr1:2487800..2487845,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.88e-19!76;CL:0002057!1.08e-16!42;CL:0000557!2.79e-16!71;CL:0000839!4.49e-16!70;CL:0002009!1.52e-15!65;CL:0002194!4.55e-15!63;CL:0000576!4.55e-15!63;CL:0000040!4.55e-15!63;CL:0000559!4.55e-15!63;CL:0000738!1.23e-13!140;CL:0000860!3.07e-13!45;CL:0002031!1.23e-11!124;CL:0002087!1.01e-10!119;CL:0000763!1.83e-09!112;CL:0000049!1.83e-09!112;CL:0000988!3.30e-08!182;CL:0000115!6.98e-08!35;CL:0002032!7.85e-08!165;CL:0000837!7.85e-08!165;CL:0000037!9.52e-08!172;CL:0000566!9.52e-08!172 | |ontology_enrichment_celltype=CL:0000766!1.88e-19!76;CL:0002057!1.08e-16!42;CL:0000557!2.79e-16!71;CL:0000839!4.49e-16!70;CL:0002009!1.52e-15!65;CL:0002194!4.55e-15!63;CL:0000576!4.55e-15!63;CL:0000040!4.55e-15!63;CL:0000559!4.55e-15!63;CL:0000738!1.23e-13!140;CL:0000860!3.07e-13!45;CL:0002031!1.23e-11!124;CL:0002087!1.01e-10!119;CL:0000763!1.83e-09!112;CL:0000049!1.83e-09!112;CL:0000988!3.30e-08!182;CL:0000115!6.98e-08!35;CL:0002032!7.85e-08!165;CL:0000837!7.85e-08!165;CL:0000037!9.52e-08!172;CL:0000566!9.52e-08!172 | ||
|ontology_enrichment_celltype_v019=CL:0000473;9.00e-14;39!CL:0000234;9.00e-14;39!CL:0000860;1.14e-12;33!CL:0002057;1.14e-12;33!CL:0000576;1.19e-10;48!CL:0000766;1.25e-10;69!CL:0000115;3.23e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.09e-22,72;CL:0000473,2.43e-20,48;CL:0000234,2.43e-20,48;CL:0000557,2.80e-19,67;CL:0000839,4.48e-19,66;CL:0002009,1.25e-18,61;CL:0002194,3.75e-18,59;CL:0000576,3.75e-18,59;CL:0000040,3.75e-18,59;CL:0000559,3.75e-18,59;CL:0000860,1.01e-16,42;CL:0002057,1.01e-16,42;CL:0000738,2.81e-15,136;CL:0002031,3.18e-13,120;CL:0002087,2.91e-12,115;CL:0000763,7.34e-11,108;CL:0000049,7.34e-11,108;CL:0000988,7.26e-09,177;CL:0002032,9.41e-09,161;CL:0000837,9.41e-09,161;CL:0000037,1.21e-08,168;CL:0000115,2.98e-08,36 | |||
|ontology_enrichment_development_v019=CL:0002057;1.86e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.71e-25!112;UBERON:0002390!1.19e-21!102;UBERON:0003061!1.19e-21!102;UBERON:0002405!1.34e-18!115;UBERON:0002371!4.47e-16!80;UBERON:0003081!1.02e-13!216;UBERON:0001474!3.42e-13!86;UBERON:0004765!1.30e-11!101;UBERON:0001434!1.30e-11!101;UBERON:0007023!5.52e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.92e-28,108;UBERON:0002390,1.64e-24,98;UBERON:0003061,1.64e-24,98;UBERON:0002405,1.90e-22,93;UBERON:0002371,8.07e-19,76;UBERON:0003081,1.39e-17,203;UBERON:0001474,1.84e-15,82;UBERON:0004765,4.39e-14,90;UBERON:0001434,1.67e-13,100;UBERON:0000926,4.77e-10,315;UBERON:0004120,4.77e-10,315;UBERON:0006603,4.77e-10,315;UBERON:0002204,2.26e-07,167;UBERON:0007023,6.31e-07,114 | |||
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| ||
|short_description=p2@TNFRSF14 | |short_description=p2@TNFRSF14 | ||
}} | }} |
Latest revision as of 00:59, 17 September 2015
Short description: | p2@TNFRSF14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TNFRSF14_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000355716, ENST00000423768, ENST00000442392, ENST00000475523, ENST00000482074, NM_003820, uc001ajr.2, uc001ajs.2, uc001ajt.1, uc009vlf.1, uc010nzc.1_5end |
EntrezGene: | TNFRSF14 |
HGNC: | 11912 |
UniProt: | Q92956B4DU65F8WAX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.09e-22 | 72 |
defensive cell | 2.43e-20 | 48 |
phagocyte | 2.43e-20 | 48 |
granulocyte monocyte progenitor cell | 2.80e-19 | 67 |
myeloid lineage restricted progenitor cell | 4.48e-19 | 66 |
macrophage dendritic cell progenitor | 1.25e-18 | 61 |
monopoietic cell | 3.75e-18 | 59 |
monocyte | 3.75e-18 | 59 |
monoblast | 3.75e-18 | 59 |
promonocyte | 3.75e-18 | 59 |
classical monocyte | 1.01e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.01e-16 | 42 |
leukocyte | 2.81e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 3.18e-13 | 120 |
nongranular leukocyte | 2.91e-12 | 115 |
myeloid cell | 7.34e-11 | 108 |
common myeloid progenitor | 7.34e-11 | 108 |
hematopoietic cell | 7.26e-09 | 177 |
hematopoietic oligopotent progenitor cell | 9.41e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.41e-09 | 161 |
hematopoietic stem cell | 1.21e-08 | 168 |
endothelial cell | 2.98e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.92e-28 | 108 |
hematopoietic system | 1.64e-24 | 98 |
blood island | 1.64e-24 | 98 |
immune system | 1.90e-22 | 93 |
bone marrow | 8.07e-19 | 76 |
lateral plate mesoderm | 1.39e-17 | 203 |
bone element | 1.84e-15 | 82 |
skeletal element | 4.39e-14 | 90 |
skeletal system | 1.67e-13 | 100 |
mesoderm | 4.77e-10 | 315 |
mesoderm-derived structure | 4.77e-10 | 315 |
presumptive mesoderm | 4.77e-10 | 315 |
musculoskeletal system | 2.26e-07 | 167 |
adult organism | 6.31e-07 | 114 |