FFCP PHASE1:Hg19::chr16:11650476..11650513,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9516 | |EntrezGene=9516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16841 | |HGNC=16841 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=72bp_to_EU446689,EU831762,EU831840_5end | |association_with_transcript=72bp_to_EU446689,EU831762,EU831840_5end | ||
|cluster_id=chr16:11650476..11650513,- | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_7_at_LITAF_5end | |description=CAGE_peak_7_at_LITAF_5end | ||
|id=chr16:11650476..11650513,- | |id=chr16:11650476..11650513,- | ||
|ontology_enrichment_celltype=CL:0000766!1.15e-24!76;CL:0000557!3.62e-21!71;CL:0002009!3.80e-21!65;CL:0002194!1.85e-20!63;CL:0000576!1.85e-20!63;CL:0000040!1.85e-20!63;CL:0000559!1.85e-20!63;CL:0000839!3.62e-20!70;CL:0002057!9.65e-20!42;CL:0000738!5.15e-19!140;CL:0000860!1.90e-18!45;CL:0002031!2.16e-17!124;CL:0002087!3.37e-16!119;CL:0000763!1.01e-11!112;CL:0000049!1.01e-11!112;CL:0002032!2.40e-11!165;CL:0000837!2.40e-11!165;CL:0000037!2.80e-10!172;CL:0000566!2.80e-10!172;CL:0000988!3.28e-09!182 | |ontology_enrichment_celltype=CL:0000766!1.15e-24!76;CL:0000557!3.62e-21!71;CL:0002009!3.80e-21!65;CL:0002194!1.85e-20!63;CL:0000576!1.85e-20!63;CL:0000040!1.85e-20!63;CL:0000559!1.85e-20!63;CL:0000839!3.62e-20!70;CL:0002057!9.65e-20!42;CL:0000738!5.15e-19!140;CL:0000860!1.90e-18!45;CL:0002031!2.16e-17!124;CL:0002087!3.37e-16!119;CL:0000763!1.01e-11!112;CL:0000049!1.01e-11!112;CL:0002032!2.40e-11!165;CL:0000837!2.40e-11!165;CL:0000037!2.80e-10!172;CL:0000566!2.80e-10!172;CL:0000988!3.28e-09!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.49e-34;33!CL:0002057;2.49e-34;33!CL:0000473;5.58e-31;39!CL:0000234;5.58e-31;39!CL:0000576;2.62e-20;48!CL:0000766;7.72e-17;69!CL:0000763;9.91e-09;100!CL:0002087;2.38e-07;104!CL:0000738;8.10e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.81e-38,72;CL:0000473,5.61e-34,48;CL:0000234,5.61e-34,48;CL:0000557,2.96e-32,67;CL:0002009,5.26e-32,61;CL:0002194,8.00e-32,59;CL:0000576,8.00e-32,59;CL:0000040,8.00e-32,59;CL:0000559,8.00e-32,59;CL:0000839,2.75e-31,66;CL:0000860,2.91e-30,42;CL:0002057,2.91e-30,42;CL:0000738,9.06e-24,136;CL:0000763,6.28e-21,108;CL:0000049,6.28e-21,108;CL:0002031,1.68e-20,120;CL:0002087,3.98e-20,115;CL:0002032,6.76e-16,161;CL:0000837,6.76e-16,161;CL:0000037,8.45e-16,168;CL:0000988,1.60e-14,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.79e-22;42!CL:0000049;2.09e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.17e-20!102;UBERON:0003061!1.17e-20!102;UBERON:0002193!1.17e-17!112;UBERON:0002371!5.92e-17!80;UBERON:0001474!2.45e-15!86;UBERON:0004765!4.97e-13!101;UBERON:0001434!4.97e-13!101;UBERON:0002405!1.27e-12!115 | |ontology_enrichment_uberon=UBERON:0002390!1.17e-20!102;UBERON:0003061!1.17e-20!102;UBERON:0002193!1.17e-17!112;UBERON:0002371!5.92e-17!80;UBERON:0001474!2.45e-15!86;UBERON:0004765!4.97e-13!101;UBERON:0001434!4.97e-13!101;UBERON:0002405!1.27e-12!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.26e-29,98;UBERON:0003061,5.26e-29,98;UBERON:0002371,2.25e-26,76;UBERON:0002193,1.54e-25,108;UBERON:0001474,3.32e-24,82;UBERON:0004765,1.71e-21,90;UBERON:0002405,2.24e-20,93;UBERON:0001434,9.89e-19,100;UBERON:0003081,4.62e-09,203 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.140954404095971,0,0.446961094427288,2.61701557230111,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.369363174230364,0.204000691244253,0,0.286235987131057,0.136874425072884,0.251085279189606,0.916960868975415,0.738905305049512,0.629686250509434,1.96682138424452,0.767658796194425,0.154816123316076,0,0.90361775633475,2.21852406100073,0.0774672005803016,0,0,0.553995408531877,3.20871115952227,0.217010870715852,3.80656306207871,1.6194683300949,2.31818010870768,10.3232749533491,6.42389104270976,4.60909716256851,15.3403164357752,19.3248907370258,9.91060386864331,17.261543539329,16.3942852178624,8.0403958162119,6.55016793399575,10.973239620925,6.77132432971709,14.8711448238658,22.6512104548012,3.82029923556644,13.4676912643197,12.5162320559677,12.1474053901818,12.8642007072819,18.5501201588118,9.37694451171927,7.54544020434318,10.7803192691317,9.9651559839292,16.0799145764316,12.5155900420848,8.47036494349955,10.2917915447673,8.47038562771399,7.27863491114034,2.32380814943136,0.850417199860174,0.419317291016752,1.01095768031846,1.05123824989054,0.48217676009124,0.570025487482497,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,1.32171328579026,1.68152568894461,0,0.393419540227666,3.14408610199332,2.67281948699362,0.501559486172034,0.977766799900771,0.473447805734733,1.94826728407911,1.22551502573691,1.17842362989935,1.10766947291811,0.812411591295047,1.15282187753108,0.130059347559878,0.328875809207352,0.829050053357545,0.289803085735052,1.03800594213442,0.535081656179426,1.04535523804977,0.566546713487831,0.383220493601921,1.03088233644789,1.26509846009751,0.318565414324097,0.651083453856419,0.950452044448374,0.602300476311091,0.639933055772092,1.24930726552346,1.65744076430812,1.64225599384209,1.00803371612366,3.4767225451856,0.724122019413995,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0,1.45990461090791,0.189069634328136,0,0.087834785693126,0.654895377488563,0.728590576585084,1.11235332835329,0.97364218096405,1.0447784237956,2.52620124985844,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0.44905874525234,0.112611480483322,0,0,0,6.58902087180316,19.3890132074163,0.872188104285069,0.496971951695318,0,0,0,0.354668382198357,0.560677600142307,0,0.49333509683432,0.311211035399766,0.538842688278752,0.163461903113459,0.151357427644931,1.72852777344,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0.245668634623536,0.309977343527296,4.75201142912821,3.70900393917835,1.82032272387605,0,0.168336113954066,0.750711119231785,0,0,0.612975591598039,3.15499923703853,0.113432183160021,0,0,0.423863802319124,0,0.515262646192195,0,0.18611685633159,0,0.0974370051611986,0,0.276149695926898,1.45481451136931,0.355009592516614,0.201504196455281,0,0.773043412653187,0.272746120590835,0.860413786167011,0.609868530647977,0.530119073285941,0.348581828608555,0.829288440122964,0.756962552626885,1.45990943630332,0,1.28648187638577,0,0.464367928031979,0,0.236613600079688,0.505754070234305,0.482022059766964,0.882351781859152,0,0.71181185733329,0.674156540800822,0,0.38474715694639,0,0,0.4115740113314,0,1.26755034821831,0.982827216677626,0,0,0.245976877086227,0.343135620597051,0.548751427043128,0,0.201057944823262,0.462942225792648,0.325808305310325,1.03993478527958,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0.790204397959275,0.858486162094873,0.738651018262192,1.17002132569619,1.93220510975347,0,1.17587489739202,0.283550194484773,0.268675568108545,0.871901815541886,1.91691339582606,0.492663237895943,0.176096868026452,2.90259361757081,4.03535869567492,1.13618190083742,0.126995788584338,0,0,0,0.616964956219941,1.20137223137567,1.14330573052231,0.112131084345361,0,0,0.387815147273333,0,0,0.797814349754612,1.04007436911366,0.257207374262142,0,0,0.714889968290738,0.542621605391443,0,0,1.06617584622764,0,0,0,0.099972991182057,6.08118903205952,2.51128545716063,14.7583757638122,0,1.14861935834114,0,0,0.410952645100767,0,0.448340575974109,0.788123040807709,4.31255149719035,1.66845947163673,0.254094624222463,0,0,0,0,18.7251755986796,53.8490626567245,12.018049889645,0.36807447515742,0.500170521059677,0,1.66376689224646,4.99601168632053,2.99634588564476,0.35142424497814,1.50473049863859,2.27407504055985,0,0.664225598535437,0.184369168541703,0.781952530212746,0,0,0,2.5885704098234,1.38745825144478,0.909382714338778,0,0,0.248107807818777,0,0.280660094433074,0.640695746278505,1.02341449813341,0.64341568457443,0,0.462629081407967,0.177561725313127,0,0,0,0.241718899183244,2.00506470303285,0.736647911487171,0.34444334449382,0.728364672026868,1.18011973463482,0,0.385076685522074,0,0,0.316654886678627,0,0,0.431831832204279,0,0.270946437543853,0,0.509752546090077,0,0.447749509444357,0,0.261435451024901,0.256450125116389,0.328014645699706,0,1.95777922130672,0.27470839445503,0.082509499920588,0,1.95018073810956,0,0,0.308097234229289,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| ||
|short_description=p7@LITAF | |short_description=p7@LITAF | ||
}} | }} |
Latest revision as of 06:22, 20 September 2015
Short description: | p7@LITAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LITAF_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 72bp_to_EU446689, EU831762, EU831840_5end |
EntrezGene: | LITAF |
HGNC: | 16841 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.81e-38 | 72 |
defensive cell | 5.61e-34 | 48 |
phagocyte | 5.61e-34 | 48 |
granulocyte monocyte progenitor cell | 2.96e-32 | 67 |
macrophage dendritic cell progenitor | 5.26e-32 | 61 |
monopoietic cell | 8.00e-32 | 59 |
monocyte | 8.00e-32 | 59 |
monoblast | 8.00e-32 | 59 |
promonocyte | 8.00e-32 | 59 |
myeloid lineage restricted progenitor cell | 2.75e-31 | 66 |
classical monocyte | 2.91e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.91e-30 | 42 |
leukocyte | 9.06e-24 | 136 |
myeloid cell | 6.28e-21 | 108 |
common myeloid progenitor | 6.28e-21 | 108 |
hematopoietic lineage restricted progenitor cell | 1.68e-20 | 120 |
nongranular leukocyte | 3.98e-20 | 115 |
hematopoietic oligopotent progenitor cell | 6.76e-16 | 161 |
hematopoietic multipotent progenitor cell | 6.76e-16 | 161 |
hematopoietic stem cell | 8.45e-16 | 168 |
hematopoietic cell | 1.60e-14 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.26e-29 | 98 |
blood island | 5.26e-29 | 98 |
bone marrow | 2.25e-26 | 76 |
hemolymphoid system | 1.54e-25 | 108 |
bone element | 3.32e-24 | 82 |
skeletal element | 1.71e-21 | 90 |
immune system | 2.24e-20 | 93 |
skeletal system | 9.89e-19 | 100 |
lateral plate mesoderm | 4.62e-09 | 203 |