FFCP PHASE1:Hg19::chr11:67806439..67806460,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:67806439..67806460,+
|short_description=p2@TCIRG1
|description=CAGE_peak_2_at_TCIRG1_5end
|association_with_transcript=-1bp_to_NM_006019_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10312 | |EntrezGene=10312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11647 | |HGNC=11647 | ||
|TSSclassifier=strong | |||
|UniProt=Q13488 | |UniProt=Q13488 | ||
|association_with_transcript=-1bp_to_NM_006019_5end | |||
|cluster_id=chr11:67806439..67806460,+ | |||
|description=CAGE_peak_2_at_TCIRG1_5end | |||
|id=chr11:67806439..67806460,+ | |||
|ontology_enrichment_celltype=CL:0002371!1.39e-21!591;CL:0002320!1.54e-18!365;CL:0000144!2.61e-18!625;CL:0000048!6.06e-17!430;CL:0000134!2.04e-16!358;CL:0000738!2.79e-16!140;CL:0000723!5.17e-16!436;CL:0002087!4.90e-15!119;CL:0000766!7.47e-15!76;CL:0000034!8.29e-15!444;CL:0000219!1.86e-14!390;CL:0000003!3.83e-14!722;CL:0002194!8.93e-13!63;CL:0000576!8.93e-13!63;CL:0000040!8.93e-13!63;CL:0000559!8.93e-13!63;CL:0002031!1.01e-12!124;CL:0000557!4.92e-12!71;CL:0002009!1.52e-11!65;CL:0000839!1.75e-11!70;CL:0000012!6.42e-11!682;CL:0000037!6.56e-11!172;CL:0000566!6.56e-11!172;CL:0000548!9.06e-11!679;CL:0000004!9.06e-11!679;CL:0000255!9.06e-11!679;CL:0002032!1.47e-10!165;CL:0000837!1.47e-10!165;CL:0000988!1.66e-10!182;CL:0002057!1.49e-08!42;CL:0000063!3.70e-08!578;CL:0000763!7.95e-08!112;CL:0000049!7.95e-08!112;CL:0000860!4.72e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000766;1.95e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,7.44e-20,361;CL:0000048,5.90e-18,427;CL:0000134,1.32e-17,354;CL:0000738,1.33e-17,136;CL:0000766,7.54e-17,72;CL:0000723,1.09e-16,433;CL:0000219,4.96e-16,386;CL:0002087,5.58e-16,115;CL:0000034,2.71e-15,441;CL:0002194,1.61e-14,59;CL:0000576,1.61e-14,59;CL:0000040,1.61e-14,59;CL:0000559,1.61e-14,59;CL:0002031,6.11e-14,120;CL:0000557,8.19e-14,67;CL:0000839,2.96e-13,66;CL:0002009,3.67e-13,61;CL:0000473,6.96e-12,48;CL:0000234,6.96e-12,48;CL:0000988,7.12e-12,177;CL:0000037,7.74e-12,168;CL:0002032,2.05e-11,161;CL:0000837,2.05e-11,161;CL:0000763,6.12e-09,108;CL:0000049,6.12e-09,108;CL:0000860,1.13e-08,42;CL:0002057,1.13e-08,42 | |||
|ontology_enrichment_development_v019=CL:0002057;7.26e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.63e-17!375;UBERON:0003081!4.50e-16!216;UBERON:0002390!2.89e-13!102;UBERON:0003061!2.89e-13!102;UBERON:0002371!2.84e-11!80;UBERON:0002193!4.33e-11!112;UBERON:0002204!1.15e-10!167;UBERON:0001474!1.07e-09!86;UBERON:0004765!8.09e-09!101;UBERON:0001434!8.09e-09!101;UBERON:0000926!4.30e-07!448;UBERON:0004120!4.30e-07!448;UBERON:0006603!4.30e-07!448;UBERON:0002405!5.48e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.22e-19,371;UBERON:0002390,9.50e-15,98;UBERON:0003061,9.50e-15,98;UBERON:0003081,3.04e-14,203;UBERON:0002371,9.24e-13,76;UBERON:0002193,1.75e-12,108;UBERON:0002204,1.09e-11,167;UBERON:0004765,2.05e-11,90;UBERON:0001474,7.62e-11,82;UBERON:0001434,1.41e-10,100;UBERON:0000926,1.65e-10,315;UBERON:0004120,1.65e-10,315;UBERON:0006603,1.65e-10,315;UBERON:0002405,3.71e-10,93 | |||
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| ||
|short_description=p2@TCIRG1 | |||
}} | }} |
Latest revision as of 19:44, 19 September 2015
Short description: | p2@TCIRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TCIRG1_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_NM_006019_5end |
EntrezGene: | TCIRG1 |
HGNC: | 11647 |
UniProt: | Q13488 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 7.44e-20 | 361 |
multi fate stem cell | 5.90e-18 | 427 |
mesenchymal cell | 1.32e-17 | 354 |
leukocyte | 1.33e-17 | 136 |
myeloid leukocyte | 7.54e-17 | 72 |
somatic stem cell | 1.09e-16 | 433 |
motile cell | 4.96e-16 | 386 |
nongranular leukocyte | 5.58e-16 | 115 |
stem cell | 2.71e-15 | 441 |
monopoietic cell | 1.61e-14 | 59 |
monocyte | 1.61e-14 | 59 |
monoblast | 1.61e-14 | 59 |
promonocyte | 1.61e-14 | 59 |
hematopoietic lineage restricted progenitor cell | 6.11e-14 | 120 |
granulocyte monocyte progenitor cell | 8.19e-14 | 67 |
myeloid lineage restricted progenitor cell | 2.96e-13 | 66 |
macrophage dendritic cell progenitor | 3.67e-13 | 61 |
defensive cell | 6.96e-12 | 48 |
phagocyte | 6.96e-12 | 48 |
hematopoietic cell | 7.12e-12 | 177 |
hematopoietic stem cell | 7.74e-12 | 168 |
hematopoietic oligopotent progenitor cell | 2.05e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.05e-11 | 161 |
myeloid cell | 6.12e-09 | 108 |
common myeloid progenitor | 6.12e-09 | 108 |
classical monocyte | 1.13e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.22e-19 | 371 |
hematopoietic system | 9.50e-15 | 98 |
blood island | 9.50e-15 | 98 |
lateral plate mesoderm | 3.04e-14 | 203 |
bone marrow | 9.24e-13 | 76 |
hemolymphoid system | 1.75e-12 | 108 |
musculoskeletal system | 1.09e-11 | 167 |
skeletal element | 2.05e-11 | 90 |
bone element | 7.62e-11 | 82 |
skeletal system | 1.41e-10 | 100 |
mesoderm | 1.65e-10 | 315 |
mesoderm-derived structure | 1.65e-10 | 315 |
presumptive mesoderm | 1.65e-10 | 315 |
immune system | 3.71e-10 | 93 |