FFCP PHASE1:Hg19::chr17:41466011..41466040,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:41466011..41466040,+ | |||
|coexpression_cluster_id=C692 | |||
|description=CAGE_peak_at_chr17:41466011..41466040,+ | |description=CAGE_peak_at_chr17:41466011..41466040,+ | ||
|id=chr17:41466011..41466040,+ | |id=chr17:41466011..41466040,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.02e-17!42;CL:0000860!7.76e-17!45;CL:0000766!3.02e-14!76;CL:0000557!3.64e-13!71;CL:0000738!1.26e-12!140;CL:0000839!6.04e-12!70;CL:0002031!2.06e-11!124;CL:0002009!6.62e-11!65;CL:0000763!7.13e-11!112;CL:0000049!7.13e-11!112;CL:0000134!1.76e-10!358;CL:0002032!1.84e-10!165;CL:0000837!1.84e-10!165;CL:0000988!2.96e-10!182;CL:0002320!4.68e-10!365;CL:0002194!5.02e-10!63;CL:0000576!5.02e-10!63;CL:0000040!5.02e-10!63;CL:0000559!5.02e-10!63;CL:0000037!6.45e-10!172;CL:0000566!6.45e-10!172;CL:0000003!1.09e-09!722;CL:0000219!3.31e-09!390;CL:0002087!5.38e-09!119;CL:0000048!1.35e-08!430;CL:0000063!4.96e-08!578;CL:0000723!8.78e-08!436;CL:0000012!2.72e-07!682;CL:0000548!3.50e-07!679;CL:0000004!3.50e-07!679;CL:0000255!3.50e-07!679;CL:0000034!3.89e-07!444 | |ontology_enrichment_celltype=CL:0002057!4.02e-17!42;CL:0000860!7.76e-17!45;CL:0000766!3.02e-14!76;CL:0000557!3.64e-13!71;CL:0000738!1.26e-12!140;CL:0000839!6.04e-12!70;CL:0002031!2.06e-11!124;CL:0002009!6.62e-11!65;CL:0000763!7.13e-11!112;CL:0000049!7.13e-11!112;CL:0000134!1.76e-10!358;CL:0002032!1.84e-10!165;CL:0000837!1.84e-10!165;CL:0000988!2.96e-10!182;CL:0002320!4.68e-10!365;CL:0002194!5.02e-10!63;CL:0000576!5.02e-10!63;CL:0000040!5.02e-10!63;CL:0000559!5.02e-10!63;CL:0000037!6.45e-10!172;CL:0000566!6.45e-10!172;CL:0000003!1.09e-09!722;CL:0000219!3.31e-09!390;CL:0002087!5.38e-09!119;CL:0000048!1.35e-08!430;CL:0000063!4.96e-08!578;CL:0000723!8.78e-08!436;CL:0000012!2.72e-07!682;CL:0000548!3.50e-07!679;CL:0000004!3.50e-07!679;CL:0000255!3.50e-07!679;CL:0000034!3.89e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.34e-17;33!CL:0002057;2.34e-17;33!CL:0000576;5.41e-14;48!CL:0000766;4.19e-11;69!CL:0000473;1.11e-10;39!CL:0000234;1.11e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.67e-26,42;CL:0002057,7.67e-26,42;CL:0000738,1.13e-21,136;CL:0000766,2.01e-21,72;CL:0000473,6.51e-21,48;CL:0000234,6.51e-21,48;CL:0002032,9.19e-21,161;CL:0000837,9.19e-21,161;CL:0002031,7.23e-20,120;CL:0000557,1.15e-19,67;CL:0000037,1.24e-19,168;CL:0000988,2.15e-19,177;CL:0000763,9.58e-19,108;CL:0000049,9.58e-19,108;CL:0000839,1.08e-17,66;CL:0002009,1.63e-16,61;CL:0002087,1.16e-15,115;CL:0002194,5.20e-15,59;CL:0000576,5.20e-15,59;CL:0000040,5.20e-15,59;CL:0000559,5.20e-15,59;CL:0000134,3.02e-12,354;CL:0002320,2.20e-11,361;CL:0000219,1.24e-10,386;CL:0000048,7.75e-10,427;CL:0000723,3.09e-09,433;CL:0000034,8.82e-09,441;CL:0002393,9.21e-09,9;CL:0002397,9.21e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;5.71e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.25e-14!86;UBERON:0002371!1.79e-14!80;UBERON:0004765!1.59e-12!101;UBERON:0001434!1.59e-12!101;UBERON:0002390!1.64e-12!102;UBERON:0003061!1.64e-12!102;UBERON:0002384!1.28e-09!375;UBERON:0002193!1.30e-09!112;UBERON:0002405!3.67e-09!115;UBERON:0002204!1.17e-07!167 | |ontology_enrichment_uberon=UBERON:0001474!1.25e-14!86;UBERON:0002371!1.79e-14!80;UBERON:0004765!1.59e-12!101;UBERON:0001434!1.59e-12!101;UBERON:0002390!1.64e-12!102;UBERON:0003061!1.64e-12!102;UBERON:0002384!1.28e-09!375;UBERON:0002193!1.30e-09!112;UBERON:0002405!3.67e-09!115;UBERON:0002204!1.17e-07!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.91e-21,76;UBERON:0001474,2.51e-20,82;UBERON:0002390,1.45e-17,98;UBERON:0003061,1.45e-17,98;UBERON:0004765,5.18e-17,90;UBERON:0002405,9.24e-17,93;UBERON:0002193,4.01e-15,108;UBERON:0001434,1.08e-13,100;UBERON:0002384,1.82e-11,371;UBERON:0003081,6.34e-09,203;UBERON:0002204,3.28e-07,167 | |||
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|short_description=p@chr17:41466011..41466040,+ | |short_description=p@chr17:41466011..41466040,+ | ||
}} | }} |
Latest revision as of 17:14, 25 July 2015
Short description: | p@chr17:41466011..41466040, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:41466011..41466040, + |
Coexpression cluster: | C692_Mast_Eosinophils_Neutrophils_Basophils_immature_CD4_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.67e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.67e-26 | 42 |
leukocyte | 1.13e-21 | 136 |
myeloid leukocyte | 2.01e-21 | 72 |
defensive cell | 6.51e-21 | 48 |
phagocyte | 6.51e-21 | 48 |
hematopoietic oligopotent progenitor cell | 9.19e-21 | 161 |
hematopoietic multipotent progenitor cell | 9.19e-21 | 161 |
hematopoietic lineage restricted progenitor cell | 7.23e-20 | 120 |
granulocyte monocyte progenitor cell | 1.15e-19 | 67 |
hematopoietic stem cell | 1.24e-19 | 168 |
hematopoietic cell | 2.15e-19 | 177 |
myeloid cell | 9.58e-19 | 108 |
common myeloid progenitor | 9.58e-19 | 108 |
myeloid lineage restricted progenitor cell | 1.08e-17 | 66 |
macrophage dendritic cell progenitor | 1.63e-16 | 61 |
nongranular leukocyte | 1.16e-15 | 115 |
monopoietic cell | 5.20e-15 | 59 |
monocyte | 5.20e-15 | 59 |
monoblast | 5.20e-15 | 59 |
promonocyte | 5.20e-15 | 59 |
mesenchymal cell | 3.02e-12 | 354 |
connective tissue cell | 2.20e-11 | 361 |
motile cell | 1.24e-10 | 386 |
multi fate stem cell | 7.75e-10 | 427 |
somatic stem cell | 3.09e-09 | 433 |
stem cell | 8.82e-09 | 441 |
intermediate monocyte | 9.21e-09 | 9 |
CD14-positive, CD16-positive monocyte | 9.21e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.91e-21 | 76 |
bone element | 2.51e-20 | 82 |
hematopoietic system | 1.45e-17 | 98 |
blood island | 1.45e-17 | 98 |
skeletal element | 5.18e-17 | 90 |
immune system | 9.24e-17 | 93 |
hemolymphoid system | 4.01e-15 | 108 |
skeletal system | 1.08e-13 | 100 |
connective tissue | 1.82e-11 | 371 |
lateral plate mesoderm | 6.34e-09 | 203 |
musculoskeletal system | 3.28e-07 | 167 |