FFCP PHASE1:Hg19::chr22:36556793..36556811,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80833 | |EntrezGene=80833 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14868 | |HGNC=14868 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000426939,ENST00000472303,ENST00000487355,ENST00000487783,ENST00000530895,ENST00000531195,ENST00000533061_5end | |association_with_transcript=0bp_to_ENST00000426939,ENST00000472303,ENST00000487355,ENST00000487783,ENST00000530895,ENST00000531195,ENST00000533061_5end | ||
|cluster_id=chr22:36556793..36556811,- | |||
|coexpression_cluster_id=C451 | |||
|description=CAGE_peak_1_at_APOL3_5end | |description=CAGE_peak_1_at_APOL3_5end | ||
|id=chr22:36556793..36556811,- | |id=chr22:36556793..36556811,- | ||
|ontology_enrichment_celltype=CL:0002087!3.80e-31!119;CL:0002031!1.59e-26!124;CL:0002057!5.10e-25!42;CL:0000738!9.16e-24!140;CL:0000860!4.61e-22!45;CL:0002194!3.31e-16!63;CL:0000576!3.31e-16!63;CL:0000040!3.31e-16!63;CL:0000559!3.31e-16!63;CL:0002009!8.91e-15!65;CL:0000839!3.63e-14!70;CL:0000838!7.85e-14!52;CL:0000542!1.70e-13!53;CL:0000051!1.70e-13!53;CL:0000037!2.05e-13!172;CL:0000566!2.05e-13!172;CL:0002032!2.93e-12!165;CL:0000837!2.93e-12!165;CL:0000766!6.20e-12!76;CL:0000988!1.27e-11!182;CL:0000557!1.30e-11!71;CL:0000791!9.22e-10!18;CL:0000789!9.22e-10!18;CL:0002420!9.22e-10!18;CL:0002419!9.22e-10!18;CL:0000790!9.22e-10!18;CL:0000084!1.58e-08!25;CL:0000827!1.58e-08!25;CL:0000625!4.02e-07!11 | |ontology_enrichment_celltype=CL:0002087!3.80e-31!119;CL:0002031!1.59e-26!124;CL:0002057!5.10e-25!42;CL:0000738!9.16e-24!140;CL:0000860!4.61e-22!45;CL:0002194!3.31e-16!63;CL:0000576!3.31e-16!63;CL:0000040!3.31e-16!63;CL:0000559!3.31e-16!63;CL:0002009!8.91e-15!65;CL:0000839!3.63e-14!70;CL:0000838!7.85e-14!52;CL:0000542!1.70e-13!53;CL:0000051!1.70e-13!53;CL:0000037!2.05e-13!172;CL:0000566!2.05e-13!172;CL:0002032!2.93e-12!165;CL:0000837!2.93e-12!165;CL:0000766!6.20e-12!76;CL:0000988!1.27e-11!182;CL:0000557!1.30e-11!71;CL:0000791!9.22e-10!18;CL:0000789!9.22e-10!18;CL:0002420!9.22e-10!18;CL:0002419!9.22e-10!18;CL:0000790!9.22e-10!18;CL:0000084!1.58e-08!25;CL:0000827!1.58e-08!25;CL:0000625!4.02e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.00e-20;33!CL:0002057;1.00e-20;33!CL:0000473;2.57e-16;39!CL:0000234;2.57e-16;39!CL:0000576;1.47e-15;48!CL:0002087;8.65e-12;104!CL:0000791;1.29e-10;18!CL:0000789;1.29e-10;18!CL:0002419;1.29e-10;18!CL:0000084;7.78e-09;25!CL:0000766;1.33e-08;69!CL:0000625;1.01e-07;11!CL:0000542;1.56e-07;53!CL:0002139;3.46e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,3.75e-33,115;CL:0002031,9.85e-29,120;CL:0000860,1.81e-27,42;CL:0002057,1.81e-27,42;CL:0000473,7.80e-26,48;CL:0000234,7.80e-26,48;CL:0000738,1.08e-25,136;CL:0002194,9.55e-19,59;CL:0000576,9.55e-19,59;CL:0000040,9.55e-19,59;CL:0000559,9.55e-19,59;CL:0002009,2.43e-17,61;CL:0000839,2.45e-16,66;CL:0000037,6.44e-15,168;CL:0000766,3.59e-14,72;CL:0000557,9.97e-14,67;CL:0002032,1.25e-13,161;CL:0000837,1.25e-13,161;CL:0000838,1.51e-13,52;CL:0000542,6.27e-13,53;CL:0000051,6.27e-13,53;CL:0000988,7.61e-13,177;CL:0000791,1.29e-10,18;CL:0000789,1.29e-10,18;CL:0002420,1.29e-10,18;CL:0002419,1.29e-10,18;CL:0000790,1.29e-10,18;CL:0000084,9.15e-09,25;CL:0000827,9.15e-09,25;CL:0000115,6.30e-08,36;CL:0000625,1.05e-07,11;CL:0002139,2.62e-07,24;CL:0002078,9.54e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002057;5.66e-20;42!CL:0000790;1.29e-10;18!CL:0000051;1.56e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.11e-20!115;UBERON:0002193!9.76e-18!112;UBERON:0002390!2.56e-14!102;UBERON:0003061!2.56e-14!102;UBERON:0002405!9.90e-14!115;UBERON:0003081!6.03e-11!216;UBERON:0002371!2.38e-10!80;UBERON:0001474!7.98e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.45e-21,108;UBERON:0007023,1.80e-20,114;UBERON:0002405,4.23e-18,93;UBERON:0002390,4.46e-17,98;UBERON:0003061,4.46e-17,98;UBERON:0003081,2.50e-14,203;UBERON:0002371,2.96e-12,76;UBERON:0001474,8.65e-10,82;UBERON:0000926,9.30e-08,315;UBERON:0004120,9.30e-08,315;UBERON:0006603,9.30e-08,315;UBERON:0004765,3.33e-07,90;UBERON:0001434,9.34e-07,100 | |||
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|phase1_expression=1.81678379270557,1.92690471501885,2.96004248601539,3.00219895059391,2.68176656656373,8.72338524100369,0,8.2123583545488,7.05201196139564,0,0,0,0,0.247532705920093,0,4.70627602516243,0,0.730310090387373,0,0.246242116153576,0,0.313454721478088,0.286235987131057,0,0,22.5419546956456,21.7566562042356,23.6132343941038,7.47392126012918,14.9693465257913,3.8704030829019,0,0,0,0.697204805222715,2.84338464974843,3.22960483268332,10.5259127621057,15.6424669026711,16.4928261744047,4.92614043327834,5.50619232232265,1.54545340580512,20.2103551903595,12.4699061417307,23.773237996406,47.183094491854,16.8578834088949,16.1047312865454,119.967727598337,64.5524980453334,75.9107957942359,21.3742322056703,18.719055823931,14.8969135253776,23.9067771219108,16.3743690034707,20.2251136000576,41.6274093624427,14.7627352455003,38.9995646737415,198.90033401259,108.707693403789,175.60459721947,59.2026846802311,24.397564661719,42.9747351806947,49.4959870555784,49.5408772499191,50.6050008162922,72.6479403160043,19.8869923433285,38.6084112677879,35.4908881004062,25.5125159958052,32.4970900537983,12.6931353195539,17.1201657839317,19.7692471637409,11.9705352371324,12.3328339863436,16.6224379925817,10.5597746676794,6.00752472388345,0.889509253863555,6.82768356106412,4.40435585739614,8.04653415936277,5.94940385506376,4.77026877267682,5.12291672198504,18.2043528704991,11.4681968437569,6.60856642895129,13.4522055115569,1.31692042387539,12.5894252872853,29.0827964434382,19.3265409059539,9.36244374187797,8.79990119910694,9.9424039204294,9.74133642039557,20.4995240668719,16.4979308185909,13.7351014641845,16.519035689666,12.5529493331162,19.6389614815416,10.1951500854279,12.1594007825773,14.7799573724877,11.8629250529648,14.9822863730239,14.6349733326968,12.4640276967323,15.7120402376788,13.7450978193052,27.8321661221453,13.6983128159362,13.6727525309848,12.3558765778289,21.6828171471993,20.4778577847069,24.9861453104692,16.3376303910372,18.064815932263,23.386382214069,52.9531587651345,26.9373391222006,2.43806866313962,4.69490601792545,1.15076305659177,4.69870898099936,2.50668955317945,4.34539556882471,4.7717156823066,30.1713619587634,0.189069634328136,0,0.263504357079378,13.4253552385155,0,0,0.324547393654683,0,0.398873881556595,0.715471872916026,1.14398982156026,1.48583000531826,1.98762407366705,1.72046919021225,1.73570250803797,7.34900324501212,7.55098985177831,7.42818713238182,2.29894463190492,12.6624211992971,13.519117982095,14.0582657361161,34.2404919542775,37.2533331802071,35.8771224595809,5.8826092855339,4.0507097394088,12.4126622314871,10.3283511408038,7.88280363383256,1.53316637465883,0,2.01521918323448,3.9534125230819,0,0,5.4666914686485,1.2663051166458,1.05927344650575,2.86836620748814,1.06400514659507,0.560677600142307,0,0.24666754841716,0.933633106199299,3.23305612967251,0.653847612453835,2.57307626996383,3.45705554687999,0.234321431833797,2.18512053781224,0,1.04614076386261,0,0,0,0,0.122834317311768,1.34323515528495,2.37600571456411,4.45080472701402,7.28129089550421,1.43723628363248,0,0.250237039743928,0,1.31693286264251,0.30648779579902,1.80285670687916,0.226864366320042,0,0.213557388818567,1.48352330811693,0.300091096084402,1.03052529238439,1.28820270022815,0.18611685633159,0,0,0.504867548488229,1.10459878370759,16.3262517387,0,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,3.12899064659632,4.5026865673502,2.76269842704961,0.464367928031979,2.88751792667834,0,0,0,0,0,0.237270619111097,0,0.392442930250692,0.38474715694639,13.2867981832437,7.01208869017229,0.4115740113314,0,11.4079531339648,9.82827216677626,11.2250082269467,3.5317047953172,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,63.2325041193503,45.3725802325079,63.5448868463558,0,0,0.984868024349589,3.7440682422278,3.26988557035202,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0.672786506072164,1.74384027533312,0.22001485746285,0,0,5.071816515336,0.531876233169741,0,0,0,0,0.57191197463259,0.542621605391443,0,1.30294473717494,0,0,1.20575750823834,1.74306691720059,0.199945982364114,2.43247561282381,3.51579964002488,2.10833939483032,1.19812427745791,2.29723871668228,0,1.59259437334337,2.26023954805422,0,4.48340575974109,15.1713685355484,28.0315847317373,23.2300895666345,0,0,0,0,0,0,0,0,0.36807447515742,0,0,3.32753378449291,1.96271887676878,1.10391690523754,1.99140405487612,0.300946099727719,0,2.0694614258501,0,0,1.73767228936166,0,0.686286847621712,8.2707210449155,16.8257076638521,21.8791493497061,0,0,0.30239029332968,0.992431231275107,0.306923946576125,0.561320188866147,1.92208723883551,1.53512174720011,0.321707842287215,7.42090332224955,0.925258162815933,1.59805552781814,0.410635780069046,0,1.51073491997947,0,0,0,2.64073230778596,1.45672934405374,2.62248829918848,0,0,0,0,0.105551628892876,20.4720091327614,13.7775901273978,6.47747748306418,12.3381802152231,0,0,0,0.831076008928724,0,16.2252308717992,14.3789498063695,0,0,0.325378394664303,13.9105365724425,0,0,0,0,3.21367859688319,0.48335359146061,0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| ||
|short_description=p1@APOL3 | |short_description=p1@APOL3 | ||
}} | }} |
Latest revision as of 01:25, 20 September 2015
Short description: | p1@APOL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_APOL3_5end |
Coexpression cluster: | C451_CD14_CD4_Eosinophils_Neutrophils_adult_Natural_CD8 |
Association with transcript: | 0bp_to_ENST00000426939, ENST00000472303, ENST00000487355, ENST00000487783, ENST00000530895, ENST00000531195, ENST00000533061_5end |
EntrezGene: | APOL3 |
HGNC: | 14868 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.45e-21 | 108 |
adult organism | 1.80e-20 | 114 |
immune system | 4.23e-18 | 93 |
hematopoietic system | 4.46e-17 | 98 |
blood island | 4.46e-17 | 98 |
lateral plate mesoderm | 2.50e-14 | 203 |
bone marrow | 2.96e-12 | 76 |
bone element | 8.65e-10 | 82 |
mesoderm | 9.30e-08 | 315 |
mesoderm-derived structure | 9.30e-08 | 315 |
presumptive mesoderm | 9.30e-08 | 315 |
skeletal element | 3.33e-07 | 90 |
skeletal system | 9.34e-07 | 100 |