FFCP PHASE1:Hg19::chr22:39151995..39152045,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25777 | |EntrezGene=25777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14210 | |HGNC=14210 | ||
|TSSclassifier=strong | |||
|UniProt=B0QY62,B0QY63,B4E2A6,Q504T5,Q9UH99 | |UniProt=B0QY62,B0QY63,B4E2A6,Q504T5,Q9UH99 | ||
|association_with_transcript=0bp_to_ENST00000405018,ENST00000438058,NM_001199579,NM_015374_5end | |association_with_transcript=0bp_to_ENST00000405018,ENST00000438058,NM_001199579,NM_015374_5end | ||
|cluster_id=chr22:39151995..39152045,- | |||
|description=CAGE_peak_1_at_SUN2_5end | |description=CAGE_peak_1_at_SUN2_5end | ||
|id=chr22:39151995..39152045,- | |id=chr22:39151995..39152045,- | ||
|ontology_enrichment_celltype=CL:0000738!4.56e-13!140;CL:0002057!6.76e-13!42;CL:0000766!3.46e-12!76;CL:0002087!7.80e-12!119;CL:0002031!3.20e-10!124;CL:0000860!5.16e-10!45;CL:0000037!7.99e-10!172;CL:0000566!7.99e-10!172;CL:0000988!1.48e-09!182;CL:0000791!1.57e-09!18;CL:0000789!1.57e-09!18;CL:0002420!1.57e-09!18;CL:0002419!1.57e-09!18;CL:0000790!1.57e-09!18;CL:0000557!6.78e-09!71;CL:0002194!7.64e-09!63;CL:0000576!7.64e-09!63;CL:0000040!7.64e-09!63;CL:0000559!7.64e-09!63;CL:0002032!9.54e-09!165;CL:0000837!9.54e-09!165;CL:0002009!1.69e-08!65;CL:0000839!6.93e-08!70;CL:0000625!2.22e-07!11 | |ontology_enrichment_celltype=CL:0000738!4.56e-13!140;CL:0002057!6.76e-13!42;CL:0000766!3.46e-12!76;CL:0002087!7.80e-12!119;CL:0002031!3.20e-10!124;CL:0000860!5.16e-10!45;CL:0000037!7.99e-10!172;CL:0000566!7.99e-10!172;CL:0000988!1.48e-09!182;CL:0000791!1.57e-09!18;CL:0000789!1.57e-09!18;CL:0002420!1.57e-09!18;CL:0002419!1.57e-09!18;CL:0000790!1.57e-09!18;CL:0000557!6.78e-09!71;CL:0002194!7.64e-09!63;CL:0000576!7.64e-09!63;CL:0000040!7.64e-09!63;CL:0000559!7.64e-09!63;CL:0002032!9.54e-09!165;CL:0000837!9.54e-09!165;CL:0002009!1.69e-08!65;CL:0000839!6.93e-08!70;CL:0000625!2.22e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.29e-09;33!CL:0002057;1.29e-09;33!CL:0000791;1.50e-09;18!CL:0000789;1.50e-09;18!CL:0002419;1.50e-09;18!CL:0000473;2.46e-09;39!CL:0000234;2.46e-09;39!CL:0000766;1.34e-07;69!CL:0000625;2.19e-07;11!CL:0000576;2.34e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.64e-14,136;CL:0000766,3.19e-14,72;CL:0000473,7.85e-14,48;CL:0000234,7.85e-14,48;CL:0002087,2.50e-13,115;CL:0000860,6.76e-13,42;CL:0002057,6.76e-13,42;CL:0002031,1.53e-11,120;CL:0000037,6.86e-11,168;CL:0002194,1.09e-10,59;CL:0000576,1.09e-10,59;CL:0000040,1.09e-10,59;CL:0000559,1.09e-10,59;CL:0000557,1.33e-10,67;CL:0000988,2.00e-10,177;CL:0002009,2.98e-10,61;CL:0002032,9.30e-10,161;CL:0000837,9.30e-10,161;CL:0000791,1.57e-09,18;CL:0000789,1.57e-09,18;CL:0002420,1.57e-09,18;CL:0002419,1.57e-09,18;CL:0000790,1.57e-09,18;CL:0000839,1.81e-09,66;CL:0000625,2.22e-07,11;CL:0000763,3.50e-07,108;CL:0000049,3.50e-07,108;CL:0000134,3.74e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;9.93e-10;42!CL:0000790;1.50e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.01e-16!216;UBERON:0007023!3.79e-14!115;UBERON:0002193!8.44e-13!112;UBERON:0002390!1.52e-12!102;UBERON:0003061!1.52e-12!102;UBERON:0002405!4.36e-09!115;UBERON:0002371!1.52e-08!80;UBERON:0001474!2.87e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,6.23e-17,203;UBERON:0002193,1.96e-14,108;UBERON:0002390,2.96e-14,98;UBERON:0003061,2.96e-14,98;UBERON:0007023,3.34e-14,114;UBERON:0002405,3.78e-11,93;UBERON:0002371,4.42e-10,76;UBERON:0001474,1.41e-08,82 | |||
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| ||
|short_description=p1@SUN2 | |short_description=p1@SUN2 | ||
}} | }} |
Latest revision as of 16:48, 24 September 2015
Short description: | p1@SUN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SUN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000405018, ENST00000438058, NM_001199579, NM_015374_5end |
EntrezGene: | SUN2 |
HGNC: | 14210 |
UniProt: | B0QY62B0QY63B4E2A6Q504T5Q9UH99 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.64e-14 | 136 |
myeloid leukocyte | 3.19e-14 | 72 |
defensive cell | 7.85e-14 | 48 |
phagocyte | 7.85e-14 | 48 |
nongranular leukocyte | 2.50e-13 | 115 |
classical monocyte | 6.76e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.76e-13 | 42 |
hematopoietic lineage restricted progenitor cell | 1.53e-11 | 120 |
hematopoietic stem cell | 6.86e-11 | 168 |
monopoietic cell | 1.09e-10 | 59 |
monocyte | 1.09e-10 | 59 |
monoblast | 1.09e-10 | 59 |
promonocyte | 1.09e-10 | 59 |
granulocyte monocyte progenitor cell | 1.33e-10 | 67 |
hematopoietic cell | 2.00e-10 | 177 |
macrophage dendritic cell progenitor | 2.98e-10 | 61 |
hematopoietic oligopotent progenitor cell | 9.30e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.30e-10 | 161 |
mature alpha-beta T cell | 1.57e-09 | 18 |
alpha-beta T cell | 1.57e-09 | 18 |
immature T cell | 1.57e-09 | 18 |
mature T cell | 1.57e-09 | 18 |
immature alpha-beta T cell | 1.57e-09 | 18 |
myeloid lineage restricted progenitor cell | 1.81e-09 | 66 |
CD8-positive, alpha-beta T cell | 2.22e-07 | 11 |
myeloid cell | 3.50e-07 | 108 |
common myeloid progenitor | 3.50e-07 | 108 |
mesenchymal cell | 3.74e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 6.23e-17 | 203 |
hemolymphoid system | 1.96e-14 | 108 |
hematopoietic system | 2.96e-14 | 98 |
blood island | 2.96e-14 | 98 |
adult organism | 3.34e-14 | 114 |
immune system | 3.78e-11 | 93 |
bone marrow | 4.42e-10 | 76 |
bone element | 1.41e-08 | 82 |