FFCP PHASE1:Hg19::chr11:846180..846233,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:846180..846233,+
|short_description=p@chr11:846180..846233,+
|description=CAGE_peak_at_chr11:846180..846233,+
|association_with_transcript=NA
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:846180..846233,+ | |||
|coexpression_cluster_id=C1156 | |||
|description=CAGE_peak_at_chr11:846180..846233,+ | |||
|id=chr11:846180..846233,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.04e-32!180;CL:0000183!6.27e-16!59;CL:0000057!9.21e-16!75;CL:0000680!2.81e-15!57;CL:0000056!2.81e-15!57;CL:0000355!2.81e-15!57;CL:0000187!1.49e-13!54;CL:0000393!4.76e-11!60;CL:0000211!4.76e-11!60;CL:0000192!7.13e-10!42;CL:0000514!7.13e-10!42;CL:0000359!2.76e-08!32;CL:0002371!4.82e-08!591;CL:0000048!2.03e-07!430;CL:0002540!5.25e-07!6;CL:0000548!6.40e-07!679;CL:0000004!6.40e-07!679;CL:0000255!6.40e-07!679;CL:0000723!6.92e-07!436;CL:0000144!8.38e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002540;2.18e-09;6!CL:0000669;4.06e-09;4!CL:0002564;1.65e-08;3!CL:0000135;6.97e-08;3!CL:0000388;6.97e-08;3!CL:0000680;1.52e-07;7!CL:0000499;2.12e-07;28!CL:0002559;4.98e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,2.42e-09,6;CL:0000680,2.49e-09,58;CL:0000056,2.49e-09,58;CL:0000355,2.49e-09,58;CL:0000669,4.16e-09,4;CL:0002564,1.65e-08,3;CL:0000135,6.83e-08,3;CL:0000388,6.83e-08,3;CL:0000187,7.17e-08,55;CL:0000499,2.14e-07,28;CL:0002559,4.87e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.27e-18!83;UBERON:0002329!8.27e-18!83;UBERON:0003077!8.27e-18!83;UBERON:0003059!8.27e-18!83;UBERON:0007282!8.27e-18!83;UBERON:0009618!8.27e-18!83;UBERON:0007285!8.27e-18!83;UBERON:0004290!3.26e-15!70;UBERON:0001134!1.96e-13!61;UBERON:0002036!1.96e-13!61;UBERON:0003082!1.96e-13!61;UBERON:0000486!7.69e-13!82;UBERON:0002385!1.31e-12!63;UBERON:0001015!1.31e-12!63;UBERON:0000383!1.31e-12!63;UBERON:0002200!6.38e-11!11;UBERON:0006876!6.38e-11!11;UBERON:0005256!1.96e-08!143;UBERON:0002049!2.67e-08!79;UBERON:0007798!2.67e-08!79;UBERON:0000481!3.16e-07!347;UBERON:0000475!4.23e-07!365;UBERON:0004535!6.59e-07!110;UBERON:0002204!8.28e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;5.12e-15;8!UBERON:0000982;5.12e-15;8!UBERON:0004770;5.12e-15;8!UBERON:0006876;6.25e-15;11!UBERON:0011135;4.31e-13;5!UBERON:0002216;4.31e-13;5!UBERON:0011134;4.31e-13;5!UBERON:0002209;4.31e-13;5!UBERON:0002213;4.31e-13;5!UBERON:0007844;4.31e-13;5!UBERON:0011138;4.31e-13;5!UBERON:0001130;4.31e-13;5!UBERON:0001066;4.31e-13;5!UBERON:0001468;4.31e-13;5!UBERON:0004765;1.36e-12;26!UBERON:0002203;9.02e-09;6!UBERON:0001768;9.02e-09;6!UBERON:0002200;9.02e-09;6!UBERON:0002242;1.65e-08;3!UBERON:0001434;3.41e-08;36!UBERON:0003104;6.93e-08;7!UBERON:0009142;6.93e-08;7!UBERON:0007846;6.97e-08;3!UBERON:0000043;6.97e-08;3!UBERON:0007845;6.97e-08;3!UBERON:0005284;8.34e-08;5!UBERON:0002073;4.98e-07;5!UBERON:0001474;7.39e-07;18!UBERON:0002204;9.73e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,5.10e-15,8;UBERON:0000982,5.10e-15,8;UBERON:0004770,5.10e-15,8;UBERON:0006876,7.09e-15,11;UBERON:0011135,4.33e-13,5;UBERON:0002216,4.33e-13,5;UBERON:0011134,4.33e-13,5;UBERON:0002209,4.33e-13,5;UBERON:0002213,4.33e-13,5;UBERON:0005856,4.33e-13,5;UBERON:0005866,4.33e-13,5;UBERON:0005863,4.33e-13,5;UBERON:0007844,4.33e-13,5;UBERON:0011138,4.33e-13,5;UBERON:0001130,4.33e-13,5;UBERON:0001066,4.33e-13,5;UBERON:0001468,4.33e-13,5;UBERON:0007524,3.75e-09,73;UBERON:0007503,5.39e-09,78;UBERON:0002204,7.70e-09,167;UBERON:0002203,9.78e-09,6;UBERON:0001768,9.78e-09,6;UBERON:0002200,9.78e-09,6;UBERON:0002242,1.65e-08,3;UBERON:0003068,1.65e-08,3;UBERON:0002328,1.65e-08,3;UBERON:0004880,1.65e-08,3;UBERON:0002329,1.82e-08,71;UBERON:0003059,1.82e-08,71;UBERON:0007282,1.82e-08,71;UBERON:0004290,1.82e-08,71;UBERON:0009618,1.82e-08,71;UBERON:0001134,2.04e-08,62;UBERON:0002036,2.04e-08,62;UBERON:0003082,2.04e-08,62;UBERON:0000486,2.59e-08,83;UBERON:0003077,2.81e-08,72;UBERON:0007285,2.81e-08,72;UBERON:0002385,5.27e-08,64;UBERON:0001015,5.27e-08,64;UBERON:0000383,5.27e-08,64;UBERON:0007846,6.83e-08,3;UBERON:0000043,6.83e-08,3;UBERON:0007845,6.83e-08,3;UBERON:0003104,8.29e-08,160;UBERON:0009142,8.29e-08,160;UBERON:0005284,8.73e-08,5;UBERON:0002073,4.87e-07,5;UBERON:0005086,4.87e-07,5 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0,0,0,0,30.3227564752114,41.7560693417174,0,0,0.730310090387373,0,1.47745269692145,8.77202972350288,0.940364164434263,0,0.273748850145768,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.255725123687061,2.53007406669196,10.0267582127178,11.0083354410226,0,0,1.13441780596881,2.21729397462564,1.66886092816939,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,1.13967460498122,0.529636723252875,2.0078563452417,1.41867352879343,3.36406560085384,0,0.24666754841716,1.8672662123986,0.269421344139376,0.163461903113459,4.54072282934794,8.06646294271999,0.70296429550139,0.936480230490962,0.570471821544449,0.597794722207204,0.117434498643765,0,0,1.22492502752936,2.45668634623536,2.27316718586684,0,0,0,2.87447256726495,0.336672227908132,0.625592599359821,0.277064115484183,0,0.919463387397059,0.600952235626387,0.226864366320042,0,0.640672166455702,0,0,0.103052529238439,0.257640540045629,0.744467425326359,0,0.0974370051611986,0.252433774244115,0.276149695926898,5.17267381820198,0.355009592516614,0.10075209822764,1.01736355386293,0,0,0,0,0,0,0,0,0,0,1.28648187638577,1.38134921352481,4.64367928031979,5.0531563716871,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,2.07986957055916,0,0.34779121492523,1.17408694235822,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,1.00917975910825,0,1.1734125731352,0.387815147273333,35.7656445851882,0,0,0,5.14414748524284,4.25547396069835,4.52917704327369,0.142977993658148,17.9065129779176,1.64648067356154,0,0,0,0,0,0,0,0,0,1.19812427745791,5.7430967917057,2.85273810081437,1.15825045334063,5.54786070886035,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,29.9367239794701,59.0201214850419,21.4299368722791,2.49565033836969,2.49800584316026,2.05013139544115,4.33423235473039,11.1350056899256,4.5481500811197,17.5904221197258,0.664225598535437,2.94990669666725,0.260650843404249,20.9507238485132,3.0882908142977,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0.512556597022804,0,0.482561763430822,2.96836132889982,0,0.355123450626254,0.492762936082855,0,0.464841513839837,0,0,0,0.229628896329213,0,1.96686622439136,0,0,0,1.46139224653261,0,0,0,0,0,1.62567862526312,2.00675909541941,0,0,0,0,0,0,0.656029291399411,0,0,0.183138929636687,0.330037999682352,0,0,0,0.386682873168488,0.616194468458578,0.614014698904518,0,2.25582514223375,3.91545073568417,0.426133137080504,0,0,0,0,0,0.929691098594572,0.31481234683064,0.6970372701606,0.924100740528266,1.06461206063404,0,0.9266210955196,1.14499909393593,6.32669227911434,3.16379424718726,0.762520775695299,5.11795582622668,4.2793898803392,2.22742273548156,0,0,0,0.235624804691373,0.606547444719948,1.58510321173008,0,0.48763373908959,0.974853958525138,0,0,0,1.13008116620243,1.65409603063837,0.66343897524122,1.31535265576129,5.78775534266688,3.9353685122798,0,0.30982349809975,0,0,1.47373561519682,0,0.354761064070598,8.86652068250189,9.22025700287725,3.03578539012572,10.1481068871045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,6.66821940867821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.568679216656392,0,0,0,0.661983911750998,0.941798755221676,0,0,0.138674673013139,0.173559738335131,0,0,0,0.343972064943233,0.0967563312890851,0,0,0,0,0.451961481561065,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0.248505071130865,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.209818352539992,0,0.896436696664224,0,0,0,0,0.542999601753713,0,0.653174720218818,0,0,0.511164065356265,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0.74988244777264,0,0,0,0,0,0.298509605773748,0,0,0.947015026375446,1.25783950876288,8.89811221596536,0,0.756154618816195,0.466311601748341,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0.343395705182793,0.673498977531838,3.78554694685953,0,0,0,0,0.231522474323834,0,0.358177682162975,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,16.2230934097715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3869946653953,0,0.40341013740704,0,0,2.78412259767164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.111231401892069,0.313972371402056,0,0,0,0,0,0.714765441766563,0,0.116241425368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| ||
|short_description=p@chr11:846180..846233,+ | |||
}} | }} |
Latest revision as of 03:10, 24 July 2015
Short description: | p@chr11:846180..846233, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:846180..846233, + |
Coexpression cluster: | C1156_Nucleus_Anulus_Mesenchymal_tenocyte_Pericytes_mesenchymal_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 2.42e-09 | 6 |
muscle precursor cell | 2.49e-09 | 58 |
myoblast | 2.49e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.49e-09 | 58 |
pericyte cell | 4.16e-09 | 4 |
nucleus pulposus cell of intervertebral disc | 1.65e-08 | 3 |
fibrocyte | 6.83e-08 | 3 |
tendon cell | 6.83e-08 | 3 |
muscle cell | 7.17e-08 | 55 |
stromal cell | 2.14e-07 | 28 |
hair follicle cell | 4.87e-07 | 5 |