FFCP PHASE1:Hg19::chr3:16524357..16524377,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23180 | |EntrezGene=23180 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30278 | |HGNC=30278 | ||
|TSSclassifier=strong | |||
|UniProt=G3XAJ6 | |UniProt=G3XAJ6 | ||
|association_with_transcript=0bp_to_ENST00000432519,uc010hes.2_5end | |association_with_transcript=0bp_to_ENST00000432519,uc010hes.2_5end | ||
|cluster_id=chr3:16524357..16524377,- | |||
|description=CAGE_peak_8_at_RFTN1_5end | |description=CAGE_peak_8_at_RFTN1_5end | ||
|id=chr3:16524357..16524377,- | |id=chr3:16524357..16524377,- | ||
|ontology_enrichment_celltype=CL:0002087!1.24e-56!119;CL:0000738!1.40e-55!140;CL:0000037!3.11e-50!172;CL:0000566!3.11e-50!172;CL:0002031!5.81e-48!124;CL:0000988!1.93e-47!182;CL:0002032!1.12e-46!165;CL:0000837!1.12e-46!165;CL:0002057!6.87e-30!42;CL:0000542!2.32e-28!53;CL:0000051!2.32e-28!53;CL:0000838!9.73e-28!52;CL:0000860!6.20e-27!45;CL:0002194!4.54e-24!63;CL:0000576!4.54e-24!63;CL:0000040!4.54e-24!63;CL:0000559!4.54e-24!63;CL:0002009!7.57e-23!65;CL:0000766!6.92e-22!76;CL:0000839!4.94e-21!70;CL:0000557!1.62e-20!71;CL:0000763!2.31e-19!112;CL:0000049!2.31e-19!112;CL:0000945!1.79e-15!24;CL:0000826!1.79e-15!24;CL:0000084!1.19e-11!25;CL:0000827!1.19e-11!25;CL:0002393!2.02e-11!9;CL:0002397!2.02e-11!9;CL:0000134!4.26e-11!358;CL:0000236!7.82e-11!14;CL:0002320!1.00e-10!365;CL:0000791!2.54e-10!18;CL:0000789!2.54e-10!18;CL:0002420!2.54e-10!18;CL:0002419!2.54e-10!18;CL:0000790!2.54e-10!18;CL:0000219!3.13e-08!390 | |ontology_enrichment_celltype=CL:0002087!1.24e-56!119;CL:0000738!1.40e-55!140;CL:0000037!3.11e-50!172;CL:0000566!3.11e-50!172;CL:0002031!5.81e-48!124;CL:0000988!1.93e-47!182;CL:0002032!1.12e-46!165;CL:0000837!1.12e-46!165;CL:0002057!6.87e-30!42;CL:0000542!2.32e-28!53;CL:0000051!2.32e-28!53;CL:0000838!9.73e-28!52;CL:0000860!6.20e-27!45;CL:0002194!4.54e-24!63;CL:0000576!4.54e-24!63;CL:0000040!4.54e-24!63;CL:0000559!4.54e-24!63;CL:0002009!7.57e-23!65;CL:0000766!6.92e-22!76;CL:0000839!4.94e-21!70;CL:0000557!1.62e-20!71;CL:0000763!2.31e-19!112;CL:0000049!2.31e-19!112;CL:0000945!1.79e-15!24;CL:0000826!1.79e-15!24;CL:0000084!1.19e-11!25;CL:0000827!1.19e-11!25;CL:0002393!2.02e-11!9;CL:0002397!2.02e-11!9;CL:0000134!4.26e-11!358;CL:0000236!7.82e-11!14;CL:0002320!1.00e-10!365;CL:0000791!2.54e-10!18;CL:0000789!2.54e-10!18;CL:0002420!2.54e-10!18;CL:0002419!2.54e-10!18;CL:0000790!2.54e-10!18;CL:0000219!3.13e-08!390 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.94e-19;24!CL:0000576;2.62e-17;48!CL:0000236;1.01e-15;13!CL:0002087;1.69e-15;104!CL:0000860;2.06e-15;33!CL:0002057;2.06e-15;33!CL:0000542;7.76e-14;53!CL:0000766;1.66e-13;69!CL:0000473;3.07e-13;39!CL:0000234;3.07e-13;39!CL:0000738;4.93e-13;136!CL:0002393;8.03e-12;6!CL:0002397;8.03e-12;6!CL:0000875;8.55e-10;3!CL:0002396;8.55e-10;3!CL:0000988;8.74e-09;177!CL:0000767;1.69e-08;3!CL:0000226;2.30e-08;3!CL:0000842;2.30e-08;3!CL:0000763;6.90e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.17e-53,136;CL:0002087,4.83e-48,115;CL:0000037,1.92e-45,168;CL:0000988,2.30e-42,177;CL:0002031,1.37e-39,120;CL:0002032,3.85e-39,161;CL:0000837,3.85e-39,161;CL:0000860,3.00e-32,42;CL:0002057,3.00e-32,42;CL:0000473,1.29e-29,48;CL:0000234,1.29e-29,48;CL:0002194,3.10e-22,59;CL:0000576,3.10e-22,59;CL:0000040,3.10e-22,59;CL:0000559,3.10e-22,59;CL:0000766,6.24e-22,72;CL:0002009,2.75e-21,61;CL:0000838,9.15e-21,52;CL:0000542,2.97e-20,53;CL:0000051,2.97e-20,53;CL:0002393,1.56e-19,9;CL:0002397,1.56e-19,9;CL:0000839,3.62e-19,66;CL:0000945,4.61e-19,24;CL:0000826,4.61e-19,24;CL:0000557,8.81e-19,67;CL:0000763,1.17e-18,108;CL:0000049,1.17e-18,108;CL:0000236,2.21e-14,14;CL:0000134,1.19e-13,354;CL:0002320,4.22e-13,361;CL:0000219,3.61e-11,386;CL:0000875,8.90e-10,3;CL:0002396,8.90e-10,3;CL:0000048,7.85e-09,427;CL:0000723,1.64e-08,433;CL:0000767,3.58e-08,3;CL:0000034,4.23e-08,441;CL:0000226,5.10e-08,3;CL:0000842,5.10e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.17e-24;42!CL:0000051;7.76e-14;53!CL:0000049;9.22e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.27e-24!102;UBERON:0003061!1.27e-24!102;UBERON:0002193!1.12e-22!112;UBERON:0002371!1.28e-17!80;UBERON:0001474!2.46e-15!86;UBERON:0002405!1.45e-14!115;UBERON:0004765!1.42e-11!101;UBERON:0001434!1.42e-11!101;UBERON:0002384!5.34e-10!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.91e-08;15!UBERON:0000179;9.91e-08;15!UBERON:0000463;9.91e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.72e-21,98;UBERON:0003061,3.72e-21,98;UBERON:0002193,9.60e-20,108;UBERON:0002371,3.06e-17,76;UBERON:0001474,1.78e-15,82;UBERON:0002405,4.76e-14,93;UBERON:0004765,1.70e-13,90;UBERON:0002384,2.37e-12,371;UBERON:0001434,1.77e-11,100;UBERON:0000178,1.09e-07,15;UBERON:0000179,1.09e-07,15;UBERON:0000463,1.09e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05653622991805,2.46301768349837,1.8890587515283,1.18009283054671,1.15148819429164,3.2511385896376,0,0,0,1.08454080812422,0.710846162437108,1.46800219667424,0.553995408531877,2.20598892217156,2.17010870715852,0.447830948479849,0.32389366601898,0.77272670290256,1.16318591023652,0.755751887377619,1.21292030593908,0.929716147622738,0,0.619412741790207,1.1507695692886,1.5369642391746,0.945928919554341,2.41321976515633,1.29096936716765,0,1.50593871634084,0.818718450173537,0,0.612167784741805,0.641858054152187,0,1.31940520074686,1.59570926097305,0.426224750532694,1.16083695451434,1.13477044938228,1.24564449799115,0.502497330513487,0.521482918420201,0.65156653411535,0,1.47311054395026,1.26584954976354,3.38008458099107,3.61427309940574,2.09658645508376,2.2465726229299,1.50176892841506,1.92870704036496,5.41524213108372,5.9675003159727,5.11459630540975,0,1.09227722252426,0.889509253863555,2.13365111283254,2.40237592221607,3.4485146397269,1.32208974556972,3.81621501814146,2.84606484554724,2.34894875748376,4.58727873750275,0,0,0.263384084775077,0.590129310341499,1.17903228824749,0.822405995998037,0.668745981562712,1.30368906653436,1.89379122293893,5.84480185223734,0.668462741311041,0.883817722424512,0.664601683750863,1.62482318259009,0.640456598628376,0.650296737799391,0.493313713811028,0.552700035571697,0.289803085735052,1.03800594213442,1.33770414044857,0,0.113309342697566,0.766440987203842,0.34362744548263,1.26509846009751,1.91139248594458,1.30216690771284,0.950452044448374,0.752875595388864,0.895906278080929,0,1.18388626022008,0,0.604820229674197,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.649094787309367,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0,1.7658523976586,1.72183813960359,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0.858486162094873,0.738651018262192,0,0.594524649154913,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0,0.788123040807709,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,1.07857100409308,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0,0,0,0,0,0,0,0,1.46139224653261,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,1.52234282769651,0,0.569647187174163,0.952927101831156,2.46817363851717,0,2.70015718619057,0,0,0,0,0.371606350251437,0,1.84968792705877,0,0,0.191505370132367,0.211673582723883,0,0,0.456469358066384,0,0,0,0.1605880751037,0.201799707191048,3.40676990152261,0.343505344755765,0,0,0,1.36771666781428,0,0,0,0,0,0,0.146508179271894,0,1.67165076416218,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0.848118428603645,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0.547364367646998,0,0,0.394584402849391,0,0,0.063186579628488,0.300646838828985,0.311064574191741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,2.36598618851383,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0.628817220398664,0.414239055347196,1.48849806543585,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5584260488975,0,0,0,0,0,1.72715170865599,0,0,9.54815513313003,3.5873506884608,7.36044274151299,0,0,0,1.19992437512958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0.345701962667338,0.514464028312255,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.904244737704086,0.744896571550295,0,0,0,0,0,0.740872583160463,0.215166616178029,0,0,0,0,0,0,0,0,0.665756774185513,0.805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095174364105,3.52625341533556 | ||
|short_description=p8@RFTN1 | |short_description=p8@RFTN1 | ||
}} | }} |
Latest revision as of 12:51, 16 September 2015
Short description: | p8@RFTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RFTN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000432519, uc010hes.2_5end |
EntrezGene: | RFTN1 |
HGNC: | 30278 |
UniProt: | G3XAJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.72e-21 | 98 |
blood island | 3.72e-21 | 98 |
hemolymphoid system | 9.60e-20 | 108 |
bone marrow | 3.06e-17 | 76 |
bone element | 1.78e-15 | 82 |
immune system | 4.76e-14 | 93 |
skeletal element | 1.70e-13 | 90 |
connective tissue | 2.37e-12 | 371 |
skeletal system | 1.77e-11 | 100 |
blood | 1.09e-07 | 15 |
haemolymphatic fluid | 1.09e-07 | 15 |
organism substance | 1.09e-07 | 15 |