FFCP PHASE1:Hg19::chr3:170098801..170098805,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6498 | |EntrezGene=6498 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10897 | |HGNC=10897 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-258bp_to_ENST00000490894_5end | |association_with_transcript=-258bp_to_ENST00000490894_5end | ||
|cluster_id=chr3:170098801..170098805,+ | |||
|description=CAGE_peak_12_at_SKIL_5end | |description=CAGE_peak_12_at_SKIL_5end | ||
|id=chr3:170098801..170098805,+ | |id=chr3:170098801..170098805,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.35e-17!42;CL:0000860!2.13e-15!45;CL:0002009!4.25e-13!65;CL:0002194!4.58e-13!63;CL:0000576!4.58e-13!63;CL:0000040!4.58e-13!63;CL:0000559!4.58e-13!63;CL:0000557!1.33e-11!71;CL:0000839!3.39e-11!70;CL:0002087!1.86e-10!119;CL:0000766!2.34e-09!76;CL:0002031!1.43e-08!124;CL:0000738!2.05e-07!140 | |ontology_enrichment_celltype=CL:0002057!2.35e-17!42;CL:0000860!2.13e-15!45;CL:0002009!4.25e-13!65;CL:0002194!4.58e-13!63;CL:0000576!4.58e-13!63;CL:0000040!4.58e-13!63;CL:0000559!4.58e-13!63;CL:0000557!1.33e-11!71;CL:0000839!3.39e-11!70;CL:0002087!1.86e-10!119;CL:0000766!2.34e-09!76;CL:0002031!1.43e-08!124;CL:0000738!2.05e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.62e-80;33!CL:0002057;6.62e-80;33!CL:0000473;5.47e-60;39!CL:0000234;5.47e-60;39!CL:0000576;4.12e-38;48!CL:0000766;1.77e-21;69!CL:0000763;3.20e-16;100!CL:0002087;2.59e-13;104!CL:0002174;5.29e-10;1!CL:0000501;5.29e-10;1!CL:0000738;9.92e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.02e-71,42;CL:0002057,2.02e-71,42;CL:0000473,3.85e-62,48;CL:0000234,3.85e-62,48;CL:0002194,3.85e-49,59;CL:0000576,3.85e-49,59;CL:0000040,3.85e-49,59;CL:0000559,3.85e-49,59;CL:0002009,1.84e-47,61;CL:0000839,1.05e-43,66;CL:0000557,5.11e-43,67;CL:0000766,7.16e-40,72;CL:0000763,1.02e-25,108;CL:0000049,1.02e-25,108;CL:0002087,5.55e-24,115;CL:0002031,7.27e-23,120;CL:0000738,7.77e-20,136;CL:0002032,2.70e-16,161;CL:0000837,2.70e-16,161;CL:0000037,1.72e-15,168;CL:0000988,1.51e-14,177;CL:0002174,2.84e-10,1;CL:0000501,2.84e-10,1 | |||
|ontology_enrichment_development_v019=CL:0002057;2.17e-53;42!CL:0000049;9.69e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.50e-09!80;UBERON:0002390!1.17e-08!102;UBERON:0003061!1.17e-08!102;UBERON:0001474!4.05e-08!86;UBERON:0002193!1.22e-07!112;UBERON:0000062!6.47e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;5.29e-10;1!UBERON:0005208;5.29e-10;1!UBERON:0004145;5.29e-10;1!UBERON:0005946;5.29e-10;1!UBERON:0005965;5.29e-10;1!UBERON:0002078;5.29e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.20e-37,76;UBERON:0001474,1.03e-34,82;UBERON:0004765,2.12e-31,90;UBERON:0002405,2.66e-30,93;UBERON:0002390,1.28e-28,98;UBERON:0003061,1.28e-28,98;UBERON:0001434,5.40e-28,100;UBERON:0002193,1.02e-25,108;UBERON:0002204,1.34e-15,167;UBERON:0003081,7.22e-14,203;UBERON:0002134,5.30e-10,1;UBERON:0005208,5.30e-10,1;UBERON:0005946,5.30e-10,1;UBERON:0005965,5.30e-10,1;UBERON:0002078,5.30e-10,1;UBERON:0000926,7.57e-09,315;UBERON:0004120,7.57e-09,315;UBERON:0006603,7.57e-09,315 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.601633342410425,0,0,0,0,1.89017710413434,1.13362783106643,0.242584061187816,0.697287110717054,0.411167888021826,0.309706370895104,1.43846196161075,2.0492856522328,0.236482229888585,3.44745680736619,1.29096936716765,1.35426486594342,1.50593871634084,1.09162460023138,0.449446968890169,2.44867113896722,0,1.27867425159808,1.31940520074686,0.797854630486527,0,2.03146467040009,1.70215567407342,1.24564449799115,1.50749199154046,1.5644487552606,0.434377689410233,1.81619850790011,0.368277635987565,1.26584954976354,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.616804496998528,0,0.32592226663359,0,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0.795285947051099,0,0,0.443458794925128,0.43917392846563,0.327447688744282,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0.81014194788176,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0.646882724578552,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.960548020230999,0,0,0,0.248107807818777,0.306923946576125,0,0.256278298511402,0.511707249066704,0.321707842287215,0,0,0,0.0821271560138091,0,0,0,0.802025881213139,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0,0,0.145016693914229,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0.185803175125719,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0.121360521749513,0.111443384277478,0,0.23874448473769,0,0,0,0.140669416410513,0.333926115068718,0.16480387422676,0.211125408127993,0,0.552567831062295,0,0.511343412510774,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0.236387681767936,0.344743373241465,0.291604613383254,0,0,0,0,0.110579259931225,0.295547618953547,0,0.10893846351899,0.278847488557207,0,0.113942055847001,0,0.269272933229316,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0.216388639742091,0,0.176915129006678,0,0.889563386041866,0.247127877893006,0.208843899010911,0,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0.569219092059585,0,0,0.293977192243133,0.261177619741208,0,0,0,0,0,0,0,0,0.411125773940253,0.19871461170299,0,0.391102765469606,0.400794101257669,0.426905989478705,0.19980960958213,0.144090417154106,0.114536596165916,0,0,0.248505071130865,0,0,0.313808538937,0,0.577901179803038,0.600420288709789,0.273810757783986,0,1.71906176567983,0,0.837847203816763,0.458320848023367,1.43574604915363,0.199679000498991,0,0,0.201550417460179,0.720599767084807,0,0.0787831823072236,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.242998226632099,0,0,0.104909176269996,0,0,0.383830394638891,0.714695326373367,0,0.25426853765475,0,0,0,1.19730191562487,0.164185041498678,0,0,0,0,0,0.13223260174269,0.513260513652988,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0.314108192500469,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0.358177682162975,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0.76736622782191,0,0,0.109209638192014,0,0,0.619678821295011,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0,0.252071696221718,0,0,0,0,0,0,0,0.762764190934334,0,0,0.0752103283492573,0,0.781514011233092,0,0.327543835020193,0.295712172434091,0.0675375846183947,0,0,0,0,0,0,0,0.511049710558381,0,0.336283722218824,0,0.455324382702595,0,0,0.514464028312255,0.0679697329768317,0.131545547125698,0.118193840883968,0,0.078493092850514,0.157115589916002,0.840816489941367,0.913158720509496,0.215927591218621,0.477751687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|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.601633342410425,0,0,0,0,1.89017710413434,1.13362783106643,0.242584061187816,0.697287110717054,0.411167888021826,0.309706370895104,1.43846196161075,2.0492856522328,0.236482229888585,3.44745680736619,1.29096936716765,1.35426486594342,1.50593871634084,1.09162460023138,0.449446968890169,2.44867113896722,0,1.27867425159808,1.31940520074686,0.797854630486527,0,2.03146467040009,1.70215567407342,1.24564449799115,1.50749199154046,1.5644487552606,0.434377689410233,1.81619850790011,0.368277635987565,1.26584954976354,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.616804496998528,0,0.32592226663359,0,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0.795285947051099,0,0,0.443458794925128,0.43917392846563,0.327447688744282,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0.81014194788176,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0.646882724578552,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.960548020230999,0,0,0,0.248107807818777,0.306923946576125,0,0.256278298511402,0.511707249066704,0.321707842287215,0,0,0,0.0821271560138091,0,0,0,0.802025881213139,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0,0,0.145016693914229,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0.185803175125719,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.540911356951966,0,0,0,0.146508179271894,0.121360521749513,0.111443384277478,0,0.23874448473769,0,0,0,0.140669416410513,0.333926115068718,0.16480387422676,0.211125408127993,0,0.552567831062295,0,0.511343412510774,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0.236387681767936,0.344743373241465,0.291604613383254,0,0,0,0,0.110579259931225,0.295547618953547,0,0.10893846351899,0.278847488557207,0,0.113942055847001,0,0.269272933229316,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0.216388639742091,0,0.176915129006678,0,0.889563386041866,0.247127877893006,0.208843899010911,0,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0.569219092059585,0,0,0.293977192243133,0.261177619741208,0,0,0,0,0,0,0,0,0.411125773940253,0.19871461170299,0,0.391102765469606,0.400794101257669,0.426905989478705,0.19980960958213,0.144090417154106,0.114536596165916,0,0,0.248505071130865,0,0,0.313808538937,0,0.577901179803038,0.600420288709789,0.273810757783986,0,1.71906176567983,0,0.837847203816763,0.458320848023367,1.43574604915363,0.199679000498991,0,0,0.201550417460179,0.720599767084807,0,0.0787831823072236,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0.242998226632099,0,0,0.104909176269996,0,0,0.383830394638891,0.714695326373367,0,0.25426853765475,0,0,0,1.19730191562487,0.164185041498678,0,0,0,0,0,0.13223260174269,0.513260513652988,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0.314108192500469,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0.358177682162975,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0,0.76736622782191,0,0,0.109209638192014,0,0,0.619678821295011,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0,0.252071696221718,0,0,0,0,0,0,0,0.762764190934334,0,0,0.0752103283492573,0,0.781514011233092,0,0.327543835020193,0.295712172434091,0.0675375846183947,0,0,0,0,0,0,0,0.511049710558381,0,0.336283722218824,0,0.455324382702595,0,0,0.514464028312255,0.0679697329768317,0.131545547125698,0.118193840883968,0,0.078493092850514,0.157115589916002,0.840816489941367,0.913158720509496,0.215927591218621,0.477751687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| ||
|short_description=p12@SKIL | |short_description=p12@SKIL | ||
}} | }} |
Latest revision as of 16:09, 16 September 2015
Short description: | p12@SKIL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SKIL_5end |
Coexpression cluster: | NA |
Association with transcript: | -258bp_to_ENST00000490894_5end |
EntrezGene: | SKIL |
HGNC: | 10897 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.02e-71 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.02e-71 | 42 |
defensive cell | 3.85e-62 | 48 |
phagocyte | 3.85e-62 | 48 |
monopoietic cell | 3.85e-49 | 59 |
monocyte | 3.85e-49 | 59 |
monoblast | 3.85e-49 | 59 |
promonocyte | 3.85e-49 | 59 |
macrophage dendritic cell progenitor | 1.84e-47 | 61 |
myeloid lineage restricted progenitor cell | 1.05e-43 | 66 |
granulocyte monocyte progenitor cell | 5.11e-43 | 67 |
myeloid leukocyte | 7.16e-40 | 72 |
myeloid cell | 1.02e-25 | 108 |
common myeloid progenitor | 1.02e-25 | 108 |
nongranular leukocyte | 5.55e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 7.27e-23 | 120 |
leukocyte | 7.77e-20 | 136 |
hematopoietic oligopotent progenitor cell | 2.70e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.70e-16 | 161 |
hematopoietic stem cell | 1.72e-15 | 168 |
hematopoietic cell | 1.51e-14 | 177 |
follicular cell of ovary | 2.84e-10 | 1 |
granulosa cell | 2.84e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.20e-37 | 76 |
bone element | 1.03e-34 | 82 |
skeletal element | 2.12e-31 | 90 |
immune system | 2.66e-30 | 93 |
hematopoietic system | 1.28e-28 | 98 |
blood island | 1.28e-28 | 98 |
skeletal system | 5.40e-28 | 100 |
hemolymphoid system | 1.02e-25 | 108 |
musculoskeletal system | 1.34e-15 | 167 |
lateral plate mesoderm | 7.22e-14 | 203 |
tricuspid valve | 5.30e-10 | 1 |
right atrium valve | 5.30e-10 | 1 |
outflow tract of atrium | 5.30e-10 | 1 |
outflow part of right atrium | 5.30e-10 | 1 |
right cardiac atrium | 5.30e-10 | 1 |
mesoderm | 7.57e-09 | 315 |
mesoderm-derived structure | 7.57e-09 | 315 |
presumptive mesoderm | 7.57e-09 | 315 |