FFCP PHASE1:Hg19::chr1:150737351..150737361,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1520 | |EntrezGene=1520 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2545 | |HGNC=2545 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-173bp_to_ENST00000480760_5end | |association_with_transcript=-173bp_to_ENST00000480760_5end | ||
|cluster_id=chr1:150737351..150737361,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_23_at_CTSS_5end | |description=CAGE_peak_23_at_CTSS_5end | ||
|id=chr1:150737351..150737361,- | |id=chr1:150737351..150737361,- | ||
|ontology_enrichment_celltype=CL:0002057!1.23e-73!42;CL:0000860!1.23e-68!45;CL:0002194!7.83e-48!63;CL:0000576!7.83e-48!63;CL:0000040!7.83e-48!63;CL:0000559!7.83e-48!63;CL:0002009!2.44e-46!65;CL:0000839!5.71e-43!70;CL:0000557!2.37e-42!71;CL:0000766!1.67e-39!76;CL:0000763!2.04e-26!112;CL:0000049!2.04e-26!112;CL:0002087!8.84e-25!119;CL:0002031!1.01e-23!124;CL:0000738!7.68e-21!140;CL:0002032!1.91e-17!165;CL:0000837!1.91e-17!165;CL:0000037!1.14e-16!172;CL:0000566!1.14e-16!172;CL:0000988!1.16e-15!182;CL:0000134!4.77e-07!358;CL:0002320!7.12e-07!365 | |ontology_enrichment_celltype=CL:0002057!1.23e-73!42;CL:0000860!1.23e-68!45;CL:0002194!7.83e-48!63;CL:0000576!7.83e-48!63;CL:0000040!7.83e-48!63;CL:0000559!7.83e-48!63;CL:0002009!2.44e-46!65;CL:0000839!5.71e-43!70;CL:0000557!2.37e-42!71;CL:0000766!1.67e-39!76;CL:0000763!2.04e-26!112;CL:0000049!2.04e-26!112;CL:0002087!8.84e-25!119;CL:0002031!1.01e-23!124;CL:0000738!7.68e-21!140;CL:0002032!1.91e-17!165;CL:0000837!1.91e-17!165;CL:0000037!1.14e-16!172;CL:0000566!1.14e-16!172;CL:0000988!1.16e-15!182;CL:0000134!4.77e-07!358;CL:0002320!7.12e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.35e-34;33!CL:0002057;8.35e-34;33!CL:0000473;2.44e-23;39!CL:0000234;2.44e-23;39!CL:0000576;2.27e-22;48!CL:0000766;1.69e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.39e-28,42;CL:0002057,1.39e-28,42;CL:0000473,4.34e-25,48;CL:0000234,4.34e-25,48;CL:0002194,3.46e-20,59;CL:0000576,3.46e-20,59;CL:0000040,3.46e-20,59;CL:0000559,3.46e-20,59;CL:0002009,1.49e-19,61;CL:0000839,3.91e-18,66;CL:0000557,7.10e-18,67;CL:0000766,1.10e-16,72;CL:0000763,2.52e-11,108;CL:0000049,2.52e-11,108;CL:0002087,1.15e-10,115;CL:0002031,3.06e-10,120;CL:0000738,4.36e-09,136;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.02e-19;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.77e-37!80;UBERON:0001474!8.72e-35!86;UBERON:0004765!1.94e-29!101;UBERON:0001434!1.94e-29!101;UBERON:0002390!3.88e-29!102;UBERON:0003061!3.88e-29!102;UBERON:0002193!2.04e-26!112;UBERON:0002405!1.09e-25!115;UBERON:0002204!3.24e-17!167;UBERON:0003081!6.32e-13!216 | |ontology_enrichment_uberon=UBERON:0002371!1.77e-37!80;UBERON:0001474!8.72e-35!86;UBERON:0004765!1.94e-29!101;UBERON:0001434!1.94e-29!101;UBERON:0002390!3.88e-29!102;UBERON:0003061!3.88e-29!102;UBERON:0002193!2.04e-26!112;UBERON:0002405!1.09e-25!115;UBERON:0002204!3.24e-17!167;UBERON:0003081!6.32e-13!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.61e-16,76;UBERON:0001474,9.81e-15,82;UBERON:0004765,1.76e-13,90;UBERON:0002405,4.60e-13,93;UBERON:0002390,2.00e-12,98;UBERON:0003061,2.00e-12,98;UBERON:0001434,3.45e-12,100;UBERON:0002193,2.52e-11,108;UBERON:0002204,1.81e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,3.16461631554365,0.768482119587302,8.0403958162119,0,0,0,0,0,0.449446968890169,0.306083892370903,0,0.639337125799041,0.989553900560148,0.199463657621632,1.70489900213078,0,0,0.622822248995575,4.01997864410789,1.0429658368404,6.29847649644838,0,0.368277635987565,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,3.16461631554365,0.768482119587302,8.0403958162119,0,0,0,0,0,0.449446968890169,0.306083892370903,0,0.639337125799041,0.989553900560148,0.199463657621632,1.70489900213078,0,0,0.622822248995575,4.01997864410789,1.0429658368404,6.29847649644838,0,0.368277635987565,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p23@CTSS | |short_description=p23@CTSS | ||
}} | }} |
Latest revision as of 23:04, 16 September 2015
Short description: | p23@CTSS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_CTSS_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -173bp_to_ENST00000480760_5end |
EntrezGene: | CTSS |
HGNC: | 2545 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.39e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.39e-28 | 42 |
defensive cell | 4.34e-25 | 48 |
phagocyte | 4.34e-25 | 48 |
monopoietic cell | 3.46e-20 | 59 |
monocyte | 3.46e-20 | 59 |
monoblast | 3.46e-20 | 59 |
promonocyte | 3.46e-20 | 59 |
macrophage dendritic cell progenitor | 1.49e-19 | 61 |
myeloid lineage restricted progenitor cell | 3.91e-18 | 66 |
granulocyte monocyte progenitor cell | 7.10e-18 | 67 |
myeloid leukocyte | 1.10e-16 | 72 |
myeloid cell | 2.52e-11 | 108 |
common myeloid progenitor | 2.52e-11 | 108 |
nongranular leukocyte | 1.15e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.06e-10 | 120 |
leukocyte | 4.36e-09 | 136 |
hematopoietic oligopotent progenitor cell | 9.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-08 | 161 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.61e-16 | 76 |
bone element | 9.81e-15 | 82 |
skeletal element | 1.76e-13 | 90 |
immune system | 4.60e-13 | 93 |
hematopoietic system | 2.00e-12 | 98 |
blood island | 2.00e-12 | 98 |
skeletal system | 3.45e-12 | 100 |
hemolymphoid system | 2.52e-11 | 108 |
musculoskeletal system | 1.81e-07 | 167 |