FFCP PHASE1:Hg19::chr1:204121102..204121136,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55224 | |EntrezGene=55224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25575 | |HGNC=25575 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NVF9 | |UniProt=Q9NVF9 | ||
|association_with_transcript=0bp_to_ENST00000367202_5end | |association_with_transcript=0bp_to_ENST00000367202_5end | ||
|cluster_id=chr1:204121102..204121136,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_ETNK2_5end | |description=CAGE_peak_3_at_ETNK2_5end | ||
|id=chr1:204121102..204121136,- | |id=chr1:204121102..204121136,- | ||
|ontology_enrichment_celltype=CL:0000066!4.94e-17!254;CL:0002321!8.49e-10!248;CL:0000220!3.25e-09!246;CL:0000223!1.57e-08!59 | |ontology_enrichment_celltype=CL:0000066!4.94e-17!254;CL:0002321!8.49e-10!248;CL:0000220!3.25e-09!246;CL:0000223!1.57e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000349;4.02e-10;19!CL:0002322;1.46e-08;5!CL:0002368;1.62e-07;13!CL:0002577;2.74e-07;3!CL:0000182;3.00e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,9.19e-12,58;CL:0000349,7.04e-10,19;CL:0000066,6.09e-09,253;CL:0002322,9.86e-09,5;CL:0002076,4.21e-08,42;CL:0002368,1.38e-07,13;CL:0002577,2.85e-07,3;CL:0000182,3.24e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000223;7.01e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!2.66e-10!126;UBERON:0004119!3.32e-09!169;UBERON:0000925!3.32e-09!169;UBERON:0006595!3.32e-09!169;UBERON:0005177!4.92e-09!107;UBERON:0000475!1.34e-08!365;UBERON:0000922!1.89e-08!612;UBERON:0004111!2.19e-08!241;UBERON:0009569!5.34e-08!113;UBERON:0000468!5.41e-08!659;UBERON:0000483!5.51e-08!309;UBERON:0000119!5.66e-08!312;UBERON:0004921!9.53e-08!129;UBERON:0004185!9.53e-08!129;UBERON:0000481!1.08e-07!347;UBERON:0005911!2.57e-07!82;UBERON:0000464!4.16e-07!104;UBERON:0002050!4.39e-07!605;UBERON:0005423!4.39e-07!605;UBERON:0001007!5.80e-07!155;UBERON:0001555!5.80e-07!155;UBERON:0007026!5.80e-07!155;UBERON:0000923!6.17e-07!604;UBERON:0005291!6.17e-07!604;UBERON:0006598!6.17e-07!604;UBERON:0002532!6.17e-07!604;UBERON:0005172!7.27e-07!55;UBERON:0005173!7.27e-07!55;UBERON:0000077!8.11e-07!130;UBERON:0000064!9.52e-07!219;UBERON:0002417!9.96e-07!61;UBERON:0000916!9.96e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.21e-09;7!UBERON:0002107;1.56e-08;19!UBERON:0006925;1.56e-08;19!UBERON:0002365;1.15e-07;31!UBERON:0002330;1.15e-07;31!UBERON:0000478;1.88e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.38e-10,14;UBERON:0000158,4.38e-10,14;UBERON:0004119,7.71e-10,160;UBERON:0000925,7.71e-10,160;UBERON:0006595,7.71e-10,160;UBERON:0000305,1.41e-09,7;UBERON:0009569,1.45e-08,112;UBERON:0002107,1.58e-08,19;UBERON:0006925,1.58e-08,19;UBERON:0008836,1.58e-08,19;UBERON:0004871,2.93e-08,8;UBERON:0005177,4.87e-08,101;UBERON:0001008,7.46e-08,48;UBERON:0002365,8.31e-08,31;UBERON:0002330,8.31e-08,31;UBERON:0004921,1.22e-07,118;UBERON:0000478,2.84e-07,24;UBERON:0006554,3.82e-07,47;UBERON:0008835,4.81e-07,22;UBERON:0003894,4.81e-07,22;UBERON:0005172,8.36e-07,54;UBERON:0005173,8.36e-07,54 | |||
|phase1_expression=0,0,0.140954404095971,2.00146596706261,0.446961094427288,0,0,0,0,0.737201809504527,0,5.46103430325431,5.80287352102598,0,0,0.672325146451775,0,1.46062018077475,0,2.83178433576612,1.83600622119828,1.88072832886853,0.286235987131057,0.547497700291537,0.502170558379211,0,0,0,0,0.383829398097213,0.309632246632152,2.75826367343678,1.50602959389125,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786839080455332,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.802320587350522,0.579297615531196,0,0,1.02290049474824,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.087834785693126,24.3621080425746,0.728590576585084,0.370784442784429,0,0.348259474598534,0.26591592103773,0,0,0,0.39752481473341,0,0.347140501607594,0,0.838998872419812,0.550236083880135,0.626984899610432,0.258416759169329,0.35576626268671,0.33472061276467,1.20848795132744,0.760272105718513,0.976248230192678,0,0,0.17859945656816,0,0.112611480483322,0,0.949265659568129,0.549605231791222,0,0,1.74437620857014,0,0.25326102332916,0,0,0,0,1.06748995729705,0.24666754841716,0.622422070799533,0.134710672069688,0,0.302714855289863,0.576175924479999,0,0,0,0,0.117434498643765,0,0.280901613404497,0.204154171254893,0,0,0,0.247266929278557,0,0.718618141816238,0,0.250237039743928,0.277064115484183,0,0,0,0.113432183160021,0.179389635688862,0.640672166455702,0.847727604638247,0,0,0,0.18611685633159,0,0,0,0.184099797284599,0.323292113637624,0,0,0.169560592310488,0,0.272746120590835,0.286804595389004,1.58565817968474,1.45782745153634,2.20768491452085,1.24393266018445,1.51392510525377,1.09493207722749,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0.4115740113314,1.47008711385542,6.33775174109154,2.94848165003288,2.36315962672562,0,1.22988438543114,0.171567810298526,0.768251997860379,1.1240175325762,0.402115889646523,0.462942225792648,1.3032332212413,0,0,0.695582429850461,0.352226082707465,0.288732895522148,0,0.380508304469197,0,1.71697232418975,0,0,0,0,0,0.141775097242386,0.179117045405697,0.290633938513962,0,0.492663237895943,0.088048434013226,0,0,0,0.126995788584338,0.381988425558278,1.17217447210047,0,0.102827492703324,0.300343057843917,0.571652865261156,0.336393253036082,0,0.1466765716419,0,0,0,1.59562869950922,1.04007436911366,0,0,0,0.57191197463259,1.08524321078289,0,0,0,0,0.301439377059586,0.871533458600294,0.199945982364114,0,0,2.10833939483032,0.239624855491583,1.14861935834114,0,0,0,0.179060963239896,0,0.197030760201927,0.215627574859517,0.385029108839245,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0.36807447515742,0.500170521059677,0,0,0,0.157702415033935,0.585707074963566,0.601892199455438,0,2.0694614258501,0,0,0.0868836144680828,1.56640925970192,0.343143423810856,0.206768026122887,0,0.320182673410333,6.66880657181771,8.32177197552485,5.14063498660456,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.483437798366489,1.20303882181971,1.93370076765382,0,0.182091168006717,0.131124414959424,2.70719767744447,0.847168708148562,0.784349769176855,0,0.73886140225013,0,0.510281115829547,0.215915916102139,1.54227252690289,0.812839312631559,1.50506932156456,0.509752546090077,0.831076008928724,0.447749509444357,0,0,0,0,0,5.66725564062472,0.640986253728404,0.577566499444116,0,0.650060246036521,0,0.096670718292122,0.308097234229289,0.307007349452259,0.137836572484531,0.214840489736547,0.725083469571143,0.170453254832202,0.0890320356467374,0.661139661443912,1.53752053892085,0,2.12431339796655,0.464845549297286,0,0,0,0,0,0,0,0.372158369359667,0,0.571890581771475,0.255897791311334,0,0.318203247925937,0,0.539617372749944,0.54907405947211,0.117812402345686,0,0,0,0.975267478179181,0,0,0.545999645631943,0,0,0,0.66343897524122,0,0.578775534266688,1.31178950409327,0,0,0,0,0.491245205065606,0,0,0,0,0,0.349934720244983,1.53955380360819,2.68120910214315,1.08890984861323,5.36619664427641,1.72202149068492,0,1.33029046061003,2.98640420269047,0,0,0,0.238231775457789,0,0,0,0,0,0,0.980160863924127,0,0,0,0.159426272728822,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,1.23087398947712,0,0,0,0,0.293016358543788,0.121360521749513,0,0,2.62618933211459,0.296964680832639,5.52889263778618,0,0.140669416410513,0.222617410045812,0,0,0.19924798825107,0,1.0077309914171,1.22722419002586,0,0,0.718946809178615,0,0,0.197286811273867,0,0,0.969332746095218,0.371072392647405,1.99613798001194,1.04171104434093,1.83665999992011,0,0.682760689712998,0.254253650292766,0.945550727071745,1.03423011972439,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,2.92789862985067,0.846452843541768,0,0.69169171316418,0.359030577639089,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.326465616318295,1.69623685720729,0.216388639742091,0,0.0884575645033392,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0.782658475728359,0.24278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| ||
|short_description=p3@ETNK2 | |short_description=p3@ETNK2 | ||
}} | }} |
Latest revision as of 00:25, 20 September 2015
Short description: | p3@ETNK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ETNK2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000367202_5end |
EntrezGene: | ETNK2 |
HGNC: | 25575 |
UniProt: | Q9NVF9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 9.19e-12 | 58 |
extraembryonic cell | 7.04e-10 | 19 |
epithelial cell | 6.09e-09 | 253 |
embryonic stem cell | 9.86e-09 | 5 |
endo-epithelial cell | 4.21e-08 | 42 |
respiratory epithelial cell | 1.38e-07 | 13 |
placental epithelial cell | 2.85e-07 | 3 |
hepatocyte | 3.24e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.38e-10 | 14 |
membranous layer | 4.38e-10 | 14 |
endoderm-derived structure | 7.71e-10 | 160 |
endoderm | 7.71e-10 | 160 |
presumptive endoderm | 7.71e-10 | 160 |
amnion | 1.41e-09 | 7 |
subdivision of trunk | 1.45e-08 | 112 |
liver | 1.58e-08 | 19 |
digestive gland | 1.58e-08 | 19 |
liver bud | 1.58e-08 | 19 |
somatic layer of lateral plate mesoderm | 2.93e-08 | 8 |
trunk region element | 4.87e-08 | 101 |
renal system | 7.46e-08 | 48 |
exocrine gland | 8.31e-08 | 31 |
exocrine system | 8.31e-08 | 31 |
subdivision of digestive tract | 1.22e-07 | 118 |
extraembryonic structure | 2.84e-07 | 24 |
urinary system structure | 3.82e-07 | 47 |
hepatic diverticulum | 4.81e-07 | 22 |
liver primordium | 4.81e-07 | 22 |
abdomen element | 8.36e-07 | 54 |
abdominal segment element | 8.36e-07 | 54 |