FFCP PHASE1:Hg19::chr5:130600546..130600567,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:130600546..130600567,- | |||
|coexpression_cluster_id=C554 | |||
|description=CAGE_peak_at_chr5:130600546..130600567,- | |description=CAGE_peak_at_chr5:130600546..130600567,- | ||
|id=chr5:130600546..130600567,- | |id=chr5:130600546..130600567,- | ||
|ontology_enrichment_celltype=CL:0000738!2.30e-48!140;CL:0000037!9.88e-39!172;CL:0000566!9.88e-39!172;CL:0000988!1.31e-37!182;CL:0002031!3.72e-34!124;CL:0002087!1.03e-33!119;CL:0002032!3.27e-32!165;CL:0000837!3.27e-32!165;CL:0000766!4.91e-32!76;CL:0000860!5.84e-32!45;CL:0002057!7.33e-32!42;CL:0000839!7.81e-24!70;CL:0000557!2.12e-23!71;CL:0002194!1.55e-20!63;CL:0000576!1.55e-20!63;CL:0000040!1.55e-20!63;CL:0000559!1.55e-20!63;CL:0000763!1.73e-20!112;CL:0000049!1.73e-20!112;CL:0002009!1.02e-19!65;CL:0000134!2.64e-14!358;CL:0002320!8.92e-14!365;CL:0000624!3.77e-13!6;CL:0000219!1.22e-12!390;CL:0000791!1.65e-12!18;CL:0000789!1.65e-12!18;CL:0002420!1.65e-12!18;CL:0002419!1.65e-12!18;CL:0000790!1.65e-12!18;CL:0000838!4.03e-11!52;CL:0000542!7.74e-11!53;CL:0000051!7.74e-11!53;CL:0000623!9.06e-11!3;CL:0000825!9.06e-11!3;CL:0000767!4.29e-10!3;CL:0000094!9.44e-10!8;CL:0000081!9.55e-10!11;CL:0000048!1.06e-09!430;CL:0000034!1.09e-09!444;CL:0000723!2.18e-09!436;CL:0000084!1.68e-08!25;CL:0000827!1.68e-08!25;CL:0002393!1.81e-08!9;CL:0002397!1.81e-08!9 | |ontology_enrichment_celltype=CL:0000738!2.30e-48!140;CL:0000037!9.88e-39!172;CL:0000566!9.88e-39!172;CL:0000988!1.31e-37!182;CL:0002031!3.72e-34!124;CL:0002087!1.03e-33!119;CL:0002032!3.27e-32!165;CL:0000837!3.27e-32!165;CL:0000766!4.91e-32!76;CL:0000860!5.84e-32!45;CL:0002057!7.33e-32!42;CL:0000839!7.81e-24!70;CL:0000557!2.12e-23!71;CL:0002194!1.55e-20!63;CL:0000576!1.55e-20!63;CL:0000040!1.55e-20!63;CL:0000559!1.55e-20!63;CL:0000763!1.73e-20!112;CL:0000049!1.73e-20!112;CL:0002009!1.02e-19!65;CL:0000134!2.64e-14!358;CL:0002320!8.92e-14!365;CL:0000624!3.77e-13!6;CL:0000219!1.22e-12!390;CL:0000791!1.65e-12!18;CL:0000789!1.65e-12!18;CL:0002420!1.65e-12!18;CL:0002419!1.65e-12!18;CL:0000790!1.65e-12!18;CL:0000838!4.03e-11!52;CL:0000542!7.74e-11!53;CL:0000051!7.74e-11!53;CL:0000623!9.06e-11!3;CL:0000825!9.06e-11!3;CL:0000767!4.29e-10!3;CL:0000094!9.44e-10!8;CL:0000081!9.55e-10!11;CL:0000048!1.06e-09!430;CL:0000034!1.09e-09!444;CL:0000723!2.18e-09!436;CL:0000084!1.68e-08!25;CL:0000827!1.68e-08!25;CL:0002393!1.81e-08!9;CL:0002397!1.81e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000623;2.67e-26;3!CL:0000097;7.04e-16;5!CL:0002393;3.96e-13;6!CL:0002397;3.96e-13;6!CL:0000791;1.90e-11;18!CL:0000789;1.90e-11;18!CL:0002419;1.90e-11;18!CL:0000766;3.47e-11;69!CL:0000094;5.58e-10;8!CL:0000163;4.68e-09;9!CL:0000084;3.40e-08;25!CL:0000081;2.18e-07;11!CL:0000625;2.78e-07;11!CL:0002087;2.93e-07;104!CL:0000576;6.25e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.23e-28,136;CL:0000623,2.91e-26,3;CL:0000825,2.91e-26,3;CL:0000037,1.47e-22,168;CL:0002031,1.11e-21,120;CL:0002032,1.83e-21,161;CL:0000837,1.83e-21,161;CL:0000988,3.04e-21,177;CL:0000766,9.31e-20,72;CL:0002087,9.90e-18,115;CL:0000097,8.62e-16,5;CL:0002028,8.62e-16,5;CL:0000839,3.84e-13,66;CL:0000557,6.37e-13,67;CL:0000763,1.98e-12,108;CL:0000049,1.98e-12,108;CL:0000791,1.49e-11,18;CL:0000789,1.49e-11,18;CL:0002420,1.49e-11,18;CL:0002419,1.49e-11,18;CL:0000790,1.49e-11,18;CL:0000860,1.61e-11,42;CL:0002057,1.61e-11,42;CL:0000473,5.94e-10,48;CL:0000234,5.94e-10,48;CL:0000094,6.32e-10,8;CL:0000838,2.35e-09,52;CL:0000542,3.70e-09,53;CL:0000051,3.70e-09,53;CL:0000163,5.23e-09,9;CL:0002393,6.16e-09,9;CL:0002397,6.16e-09,9;CL:0000134,7.86e-09,354;CL:0002320,1.38e-08,361;CL:0000084,2.87e-08,25;CL:0000827,2.87e-08,25;CL:0002194,9.34e-08,59;CL:0000576,9.34e-08,59;CL:0000040,9.34e-08,59;CL:0000559,9.34e-08,59;CL:0000219,1.00e-07,386;CL:0002009,1.79e-07,61;CL:0000081,2.38e-07,11;CL:0000625,2.55e-07,11;CL:0000034,3.01e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000790;1.90e-11;18!CL:0002057;3.71e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.01e-21!80;UBERON:0002390!2.02e-21!102;UBERON:0003061!2.02e-21!102;UBERON:0001474!1.05e-19!86;UBERON:0002193!8.88e-19!112;UBERON:0004765!1.00e-15!101;UBERON:0001434!1.00e-15!101;UBERON:0002405!3.75e-14!115;UBERON:0002384!4.69e-13!375;UBERON:0002204!6.92e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.34e-11,76;UBERON:0001474,2.90e-10,82;UBERON:0002390,5.77e-10,98;UBERON:0003061,5.77e-10,98;UBERON:0004765,3.33e-09,90;UBERON:0002193,7.25e-09,108;UBERON:0002405,7.47e-09,93;UBERON:0002384,2.97e-08,371;UBERON:0001434,4.08e-08,100 | |||
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|short_description=p@chr5:130600546..130600567,- | |short_description=p@chr5:130600546..130600567,- | ||
}} | }} |
Latest revision as of 09:26, 30 July 2015
Short description: | p@chr5:130600546..130600567, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:130600546..130600567, - |
Coexpression cluster: | C554_Mast_Natural_CD8_CD14_CD4_Basophils_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.34e-11 | 76 |
bone element | 2.90e-10 | 82 |
hematopoietic system | 5.77e-10 | 98 |
blood island | 5.77e-10 | 98 |
skeletal element | 3.33e-09 | 90 |
hemolymphoid system | 7.25e-09 | 108 |
immune system | 7.47e-09 | 93 |
connective tissue | 2.97e-08 | 371 |
skeletal system | 4.08e-08 | 100 |