FFCP PHASE1:Hg19::chr1:224370589..224370611,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8560 | |EntrezGene=8560 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13709 | |HGNC=13709 | ||
|TSSclassifier=strong | |||
|UniProt=O15121 | |UniProt=O15121 | ||
|association_with_transcript=-261bp_to_ENST00000323699_5end | |association_with_transcript=-261bp_to_ENST00000323699_5end | ||
|cluster_id=chr1:224370589..224370611,+ | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_3_at_DEGS1_5end | |description=CAGE_peak_3_at_DEGS1_5end | ||
|id=chr1:224370589..224370611,+ | |id=chr1:224370589..224370611,+ | ||
|ontology_enrichment_celltype=CL:0000945!7.28e-27!24;CL:0000826!7.28e-27!24;CL:0000236!3.71e-15!14;CL:0000542!2.43e-10!53;CL:0000051!2.43e-10!53;CL:0000838!9.49e-10!52;CL:1000507!6.64e-08!12;CL:1000494!6.64e-08!12;CL:1000497!5.30e-07!18;CL:0002518!5.30e-07!18 | |ontology_enrichment_celltype=CL:0000945!7.28e-27!24;CL:0000826!7.28e-27!24;CL:0000236!3.71e-15!14;CL:0000542!2.43e-10!53;CL:0000051!2.43e-10!53;CL:0000838!9.49e-10!52;CL:1000507!6.64e-08!12;CL:1000494!6.64e-08!12;CL:1000497!5.30e-07!18;CL:0002518!5.30e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.42e-59;24!CL:0000236;1.22e-27;13!CL:0000542;2.89e-16;53!CL:1000507;2.25e-11;10!CL:1000494;2.25e-11;10!CL:1000497;2.47e-09;17!CL:0002518;2.47e-09;17!CL:1000449;1.70e-07;15!CL:0000239;2.76e-07;3!CL:1000615;2.76e-07;3!CL:0002306;2.76e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.26e-59,24;CL:0000826,1.26e-59,24;CL:0000236,1.53e-31,14;CL:0000838,2.97e-25,52;CL:0000542,1.07e-24,53;CL:0000051,1.07e-24,53;CL:1000507,2.25e-11,10;CL:1000494,2.25e-11,10;CL:0000785,9.67e-11,2;CL:0000955,9.67e-11,2;CL:0000818,9.67e-11,2;CL:0000954,9.67e-11,2;CL:0000816,9.67e-11,2;CL:1000497,2.43e-09,17;CL:0002518,2.43e-09,17;CL:0002087,4.41e-09,115;CL:0002031,1.51e-08,120;CL:1000449,1.70e-07,15;CL:0000817,1.98e-07,3;CL:0000239,2.47e-07,3;CL:1000615,2.47e-07,3;CL:0002306,2.47e-07,3;CL:0000738,4.18e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;2.89e-16;53!CL:0000954;9.66e-11;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.58e-17;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.33e-17,10 | |||
|ontology_enrichment_uberon=UBERON:0002113!1.59e-08!27;UBERON:0003918!1.59e-08!27;UBERON:0005095!1.59e-08!27;UBERON:0007687!1.59e-08!27;UBERON:0009773!6.64e-08!12;UBERON:0001231!6.64e-08!12;UBERON:0004810!6.64e-08!12;UBERON:0003887!1.27e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.25e-11;10!UBERON:0009773;2.25e-11;10!UBERON:0001231;2.25e-11;10!UBERON:0004810;2.25e-11;10!UBERON:0002113;3.23e-11;24!UBERON:0011143;3.23e-11;24!UBERON:0000489;4.52e-09;29!UBERON:0006554;9.97e-09;30!UBERON:0001008;9.97e-09;30!UBERON:0006555;1.70e-07;15!UBERON:0004819;1.70e-07;15!UBERON:0001285;1.70e-07;15!UBERON:0007684;1.70e-07;15!UBERON:0006853;2.76e-07;3!UBERON:0007685;2.76e-07;3!UBERON:0004134;2.76e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.25e-11,10;UBERON:0002113,3.09e-10,26;UBERON:0003918,3.09e-10,26;UBERON:0011143,3.09e-10,26;UBERON:0005095,3.09e-10,26;UBERON:0007687,3.09e-10,26;UBERON:0000489,2.18e-08,31;UBERON:0004211,1.70e-07,15;UBERON:0009773,1.70e-07,15;UBERON:0001231,1.70e-07,15;UBERON:0001285,1.70e-07,15;UBERON:0007684,1.70e-07,15;UBERON:0004208,1.70e-07,15;UBERON:0006853,2.47e-07,3;UBERON:0007685,2.47e-07,3;UBERON:0004134,2.47e-07,3;UBERON:0006555,5.20e-07,16;UBERON:0004819,5.20e-07,16 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,2.44522898393444,1.55991119954897,1.18066171970519,0,0,0,0,0,0,9.91580167427861,7.2506308568585,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,5.27988733383968,1.63841583378639,1.77901850772711,3.84057200309856,2.00197993518006,2.29900975981793,1.32208974556972,0.954053754535364,0.569212969109448,2.34894875748376,0.764546456250458,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0.653638332277218,0.474541238222193,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.315404830067869,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0.131124414959424,2.25599806453706,0.770153371044148,0.784349769176855,1.46139224653261,0,0,0,0,0,0.270946437543853,1.50506932156456,2.80363900349542,0.831076008928724,3.58199607555485,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0.7133421029625,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.640944426764839,0,0.245040215981032,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0.494411622680279,0,0,4.42054264849836,0,0.20453736500431,6.64657949489775,0,0,0,0,0,0,0,0,0,0,0,7.25917999968424,0,0,0,0.945550727071745,0,0,0,0,0,0,0,0,0.219385397153973,0.762569244632931,15.1971881263678,0.153900517007594,0.227884111694002,0,0,0.217294743844016,0.638002319463839,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0.158936578980379,0.421996129056054,1.46909527343233,0,0,0,0,0,0,0.123563938946503,0,0,0,0,7.66310114705797,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0.569219092059585,0.138674673013139,0.520679215005393,0,0.435296032902013,0.17472666824203,0,0.0967563312890851,0.365446585430928,0.164230914106418,0.775912131907355,0,0.677942222341597,0,0,0,0.391102765469606,0,0,1.79828648623917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87889329023667,0,0,0,0,0,0,0.77380195455795,0,4.36065093879046,2.04894838977915,2.30800187793992,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0.171086837884329,0,0.427149650270779,1.57204305099666,0.828478110694391,0.992332043623902,4.14984426985683,7.55114109961555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76794674388145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0,0.512483037175893,0,0.607719912354764,0,0,0,0,0,0.983091635014877,0,0,0.106691729694141,0.344429959321631,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0.3062454773532,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975726071789027,2.30467975111558,0,0,0,0,0.444925607568277,0.078493092850514,0,0,0,4.75040700680967,0.47775168788705,0.0714765441766563,0,0.116241425368125,0,0,0,0,0.691259661814092,0.430227358820278,0,0,0,1.3746412112643,0.31020638566432,0,80.8714771898038,0,0,0,0,0,2.4285549652957,0.467878926924211,0.198950775161368,0,0,0,2.41540549706678,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0.939839179798536,0.128915775947154,18.8888784698116,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.639701945702943,0,0.452122368852043,0.31037357147929,0.224263725161227,0.190941474834495,0,0.435433495793923,0.342233301085281,4.8493478170503,0.143444410785353,0.332660356546013,0,0.106727345877715,0,0.0898252021065869,0,0.366724332548599,0,0,0.402547587182052,0.641136984606466 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| ||
|short_description=p3@DEGS1 | |short_description=p3@DEGS1 | ||
}} | }} |
Latest revision as of 23:08, 15 September 2015
Short description: | p3@DEGS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DEGS1_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | -261bp_to_ENST00000323699_5end |
EntrezGene: | DEGS1 |
HGNC: | 13709 |
UniProt: | O15121 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.26e-59 | 24 |
pro-B cell | 1.26e-59 | 24 |
B cell | 1.53e-31 | 14 |
lymphoid lineage restricted progenitor cell | 2.97e-25 | 52 |
lymphocyte | 1.07e-24 | 53 |
common lymphoid progenitor | 1.07e-24 | 53 |
kidney tubule cell | 2.25e-11 | 10 |
nephron tubule epithelial cell | 2.25e-11 | 10 |
mature B cell | 9.67e-11 | 2 |
pre-B-II cell | 9.67e-11 | 2 |
transitional stage B cell | 9.67e-11 | 2 |
small pre-B-II cell | 9.67e-11 | 2 |
immature B cell | 9.67e-11 | 2 |
kidney cell | 2.43e-09 | 17 |
kidney epithelial cell | 2.43e-09 | 17 |
nongranular leukocyte | 4.41e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.51e-08 | 120 |
epithelial cell of nephron | 1.70e-07 | 15 |
precursor B cell | 1.98e-07 | 3 |
brush border epithelial cell | 2.47e-07 | 3 |
kidney cortex tubule cell | 2.47e-07 | 3 |
epithelial cell of proximal tubule | 2.47e-07 | 3 |
leukocyte | 4.18e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 2.25e-11 | 10 |
kidney | 3.09e-10 | 26 |
kidney mesenchyme | 3.09e-10 | 26 |
upper urinary tract | 3.09e-10 | 26 |
kidney rudiment | 3.09e-10 | 26 |
kidney field | 3.09e-10 | 26 |
cavitated compound organ | 2.18e-08 | 31 |
nephron epithelium | 1.70e-07 | 15 |
renal tubule | 1.70e-07 | 15 |
nephron tubule | 1.70e-07 | 15 |
nephron | 1.70e-07 | 15 |
uriniferous tubule | 1.70e-07 | 15 |
nephrogenic mesenchyme | 1.70e-07 | 15 |
renal cortex tubule | 2.47e-07 | 3 |
region of nephron tubule | 2.47e-07 | 3 |
proximal tubule | 2.47e-07 | 3 |
excretory tube | 5.20e-07 | 16 |
kidney epithelium | 5.20e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.33e-17 | 10 |