FFCP PHASE1:Hg19::chr5:156536071..156536082,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84868 | |EntrezGene=84868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18437 | |HGNC=18437 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000522902_5end | |association_with_transcript=20bp_to_ENST00000522902_5end | ||
|cluster_id=chr5:156536071..156536082,- | |||
|coexpression_cluster_id=C392 | |||
|description=CAGE_peak_9_at_HAVCR2_5end | |description=CAGE_peak_9_at_HAVCR2_5end | ||
|id=chr5:156536071..156536082,- | |id=chr5:156536071..156536082,- | ||
|ontology_enrichment_celltype=CL:0000557!4.68e-51!71;CL:0000839!2.20e-46!70;CL:0000766!3.45e-46!76;CL:0002009!3.57e-45!65;CL:0002194!1.75e-43!63;CL:0000576!1.75e-43!63;CL:0000040!1.75e-43!63;CL:0000559!1.75e-43!63;CL:0000763!5.02e-43!112;CL:0000049!5.02e-43!112;CL:0002057!1.85e-39!42;CL:0000860!1.07e-35!45;CL:0000738!6.87e-32!140;CL:0000037!7.28e-32!172;CL:0000566!7.28e-32!172;CL:0002032!8.06e-32!165;CL:0000837!8.06e-32!165;CL:0002031!7.56e-31!124;CL:0000988!2.21e-28!182;CL:0002087!1.31e-27!119 | |ontology_enrichment_celltype=CL:0000557!4.68e-51!71;CL:0000839!2.20e-46!70;CL:0000766!3.45e-46!76;CL:0002009!3.57e-45!65;CL:0002194!1.75e-43!63;CL:0000576!1.75e-43!63;CL:0000040!1.75e-43!63;CL:0000559!1.75e-43!63;CL:0000763!5.02e-43!112;CL:0000049!5.02e-43!112;CL:0002057!1.85e-39!42;CL:0000860!1.07e-35!45;CL:0000738!6.87e-32!140;CL:0000037!7.28e-32!172;CL:0000566!7.28e-32!172;CL:0002032!8.06e-32!165;CL:0000837!8.06e-32!165;CL:0002031!7.56e-31!124;CL:0000988!2.21e-28!182;CL:0002087!1.31e-27!119 | ||
|ontology_enrichment_celltype_v019=CL:0000473;9.57e-54;39!CL:0000234;9.57e-54;39!CL:0000860;5.93e-52;33!CL:0002057;5.93e-52;33!CL:0000576;9.84e-32;48!CL:0000766;2.06e-27;69!CL:0000763;8.37e-15;100!CL:0000235;9.67e-15;6!CL:0000738;2.34e-10;136!CL:0000097;3.49e-10;5!CL:0002087;1.11e-08;104!CL:0002619;2.37e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.51e-73,67;CL:0000766,4.34e-70,72;CL:0000839,7.89e-69,66;CL:0002009,6.06e-63,61;CL:0002194,1.95e-62,59;CL:0000576,1.95e-62,59;CL:0000040,1.95e-62,59;CL:0000559,1.95e-62,59;CL:0000473,6.13e-58,48;CL:0000234,6.13e-58,48;CL:0000763,1.55e-49,108;CL:0000049,1.55e-49,108;CL:0000860,2.14e-45,42;CL:0002057,2.14e-45,42;CL:0002031,1.16e-39,120;CL:0000738,1.07e-37,136;CL:0002032,2.09e-33,161;CL:0000837,2.09e-33,161;CL:0002087,1.02e-31,115;CL:0000037,2.49e-31,168;CL:0000988,6.64e-29,177;CL:0000235,9.56e-15,6;CL:0000097,1.90e-10,5;CL:0002028,1.90e-10,5;CL:0002619,2.41e-08,3;CL:0000134,7.44e-08,354;CL:0002320,1.98e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;6.11e-34;42!CL:0000049;1.03e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.26e-46!80;UBERON:0002390!1.47e-41!102;UBERON:0003061!1.47e-41!102;UBERON:0001474!6.91e-41!86;UBERON:0002193!4.56e-38!112;UBERON:0002405!3.42e-34!115;UBERON:0004765!2.31e-32!101;UBERON:0001434!2.31e-32!101;UBERON:0007023!2.28e-31!115;UBERON:0001049!1.15e-12!57;UBERON:0005068!1.15e-12!57;UBERON:0006241!1.15e-12!57;UBERON:0007135!1.15e-12!57;UBERON:0002204!1.48e-12!167;UBERON:0003081!1.76e-12!216;UBERON:0002780!3.33e-10!41;UBERON:0001890!3.33e-10!41;UBERON:0006240!3.33e-10!41;UBERON:0002020!3.64e-10!34;UBERON:0003528!3.64e-10!34;UBERON:0001893!4.21e-10!34;UBERON:0003080!8.78e-10!42;UBERON:0002791!1.20e-09!33;UBERON:0002616!3.67e-09!59;UBERON:0001869!1.17e-08!32;UBERON:0001017!1.33e-08!82;UBERON:0005743!2.63e-08!86;UBERON:0000062!3.19e-08!511;UBERON:0003075!6.33e-08!86;UBERON:0007284!6.33e-08!86;UBERON:0000955!1.12e-07!69;UBERON:0006238!1.12e-07!69;UBERON:0002619!3.41e-07!22;UBERON:0000073!3.75e-07!94;UBERON:0001016!3.75e-07!94;UBERON:0002346!4.01e-07!90;UBERON:0001950!4.36e-07!20 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.45e-66,76;UBERON:0001474,4.36e-60,82;UBERON:0002405,3.19e-58,93;UBERON:0004765,1.97e-53,90;UBERON:0002390,3.51e-52,98;UBERON:0003061,3.51e-52,98;UBERON:0002193,5.58e-48,108;UBERON:0001434,1.32e-46,100;UBERON:0002204,4.95e-22,167;UBERON:0003081,3.77e-20,203;UBERON:0000926,1.89e-08,315;UBERON:0004120,1.89e-08,315;UBERON:0006603,1.89e-08,315;UBERON:0002384,2.48e-07,371 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,1.18009283054671,1.91914699048606,1.08371286321253,0,0,0,0.309868802321207,0,0,1.10799081706375,0.401088894940283,0.868043482863407,17.0175760422342,11.3362783106643,17.5151385991247,8.28769961043519,6.80176698639857,6.0646015296954,8.83230340241602,8.63452564845834,10.5300166104335,16.3984663623626,12.5518746199259,16.3172738623124,4.48169384957604,3.22742341791913,4.06279459783025,8.47090527941721,8.46009065179322,11.4608977066993,9.18251677112708,11.2325159476633,5.75403413219137,8.57613380485462,16.7549472402171,11.9342930149154,4.93355705668593,3.97169657283798,2.4912889959823,13.8186765891209,13.037072960505,12.3797641481916,3.63239701580021,3.31449872388808,3.48108626184973,0.422510572623884,0.850417199860174,0.838634582033504,0.786300418025466,0.450530678524519,0.16072558669708,0.855038231223746,0.79566670879636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,1.22551502573691,0,0,0,0.768547918354051,0.910415432919148,1.15106533222573,1.65810010671509,1.15921234294021,0,0,0,1.13309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0,0.255973222308837,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,1.37528029272598,0,0,15.9028222890795,13.5821195093428,7.84451967061304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.742756413943,18.720341211139,10.404181360211,0,0,0,0,0,0,4.43396914106349,2.28925928434388,1.4512968087854,1.44119953416961,1.76739406796932,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0273292897667,9.5428847372104,10.5416969741516,0,0,0,0,0,0,0.112085143993527,1.18218456121156,0.215627574859517,1.41177339907723,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0.199579371432817,1.7235483311913,0.635020748171649,0.324621940274555,0.842391534340376,0.456469358066384,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0.270455678475983,0,1.4098700508785,0,2.05111450980652,0,0.334330152832435,0,0,0,0,0,1.40669416410513,0,0.16480387422676,0,0.19924798825107,1.10513566212459,0,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,0,0.221158519862449,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,1.06606955203727,0,0,0.997270091400938,0,0,0,0,0.476809736941136,0,0,0,0,0,0.796118080530053,0.611030144933625,0,0,0,2.76344645220776,0,1.40558667435203,0,0,0,0,0,0.30607276163049,3.53844845919533,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.759729551470544,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,1.50595916781192,1.27746588066972,0,0,1.11712960508902,0.458320848023367,0,0,0.429226048136571,0.446342914883745,0.201550417460179,0,0,0,0,0,0,0,0,0.953423842781029,0,0,0,1.799791132412,0.77380195455795,1.27574068981852,0,3.23103399926713,1.20645552710496,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0.328370082997356,0,0,0.439656701034247,0,0.904980694530854,1.3223260174269,0,0,1.60181118851542,0,1.65695622138878,2.48083010905975,0,0,0,0.544017803369474,0.5013797880454,0,0,0,0,0.244052529803926,0.876336514945499,0,1.10929051536852,1.80079568530012,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0.194860308839388,0,0.163565394255844,0,0,0,1.39991177098451,0,3.44429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963438376446893,1.41696576325585,1.11743701340006,0,0,0.622415272177961,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.337687923091973,2.34323429584154,0.206686796501184,0.951237152908602,0,0,0.496211178389294,0,0,0,0,0,0.91064876540519,0.79832133146375,0.230467975111559,0,1.4953341254903,0.657727735628491,0,0,0.235479278551542,0.471346769748006,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0.540219106755613,0.218559560503957,0,0,0,1.17785080268967,2.0793248022896,0.8453114551668,0,1.50374268767766,2.38494185502236,0,0,0,0,0.730336388246517,0.458729283404541,1.86341458096887,0,0.951880862672806,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.535928260312357,0,1.55149493792843,0.639701945702943,0,0.193766729508018,0.434523000071005,0,0.25458863311266,0,0.217716747896961,0,0.471464371102113,0.430333232356058,0,0,0,0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|short_description=p9@HAVCR2 | |short_description=p9@HAVCR2 | ||
}} | }} |
Latest revision as of 13:21, 16 September 2015
Short description: | p9@HAVCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HAVCR2_5end |
Coexpression cluster: | C392_Monocytederived_CD14_Macrophage_CD14CD16_Dendritic_Eosinophils_migratory |
Association with transcript: | 20bp_to_ENST00000522902_5end |
EntrezGene: | HAVCR2 |
HGNC: | 18437 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.51e-73 | 67 |
myeloid leukocyte | 4.34e-70 | 72 |
myeloid lineage restricted progenitor cell | 7.89e-69 | 66 |
macrophage dendritic cell progenitor | 6.06e-63 | 61 |
monopoietic cell | 1.95e-62 | 59 |
monocyte | 1.95e-62 | 59 |
monoblast | 1.95e-62 | 59 |
promonocyte | 1.95e-62 | 59 |
defensive cell | 6.13e-58 | 48 |
phagocyte | 6.13e-58 | 48 |
myeloid cell | 1.55e-49 | 108 |
common myeloid progenitor | 1.55e-49 | 108 |
classical monocyte | 2.14e-45 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.14e-45 | 42 |
hematopoietic lineage restricted progenitor cell | 1.16e-39 | 120 |
leukocyte | 1.07e-37 | 136 |
hematopoietic oligopotent progenitor cell | 2.09e-33 | 161 |
hematopoietic multipotent progenitor cell | 2.09e-33 | 161 |
nongranular leukocyte | 1.02e-31 | 115 |
hematopoietic stem cell | 2.49e-31 | 168 |
hematopoietic cell | 6.64e-29 | 177 |
macrophage | 9.56e-15 | 6 |
mast cell | 1.90e-10 | 5 |
basophil mast progenitor cell | 1.90e-10 | 5 |
adult endothelial progenitor cell | 2.41e-08 | 3 |
mesenchymal cell | 7.44e-08 | 354 |
connective tissue cell | 1.98e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.45e-66 | 76 |
bone element | 4.36e-60 | 82 |
immune system | 3.19e-58 | 93 |
skeletal element | 1.97e-53 | 90 |
hematopoietic system | 3.51e-52 | 98 |
blood island | 3.51e-52 | 98 |
hemolymphoid system | 5.58e-48 | 108 |
skeletal system | 1.32e-46 | 100 |
musculoskeletal system | 4.95e-22 | 167 |
lateral plate mesoderm | 3.77e-20 | 203 |
mesoderm | 1.89e-08 | 315 |
mesoderm-derived structure | 1.89e-08 | 315 |
presumptive mesoderm | 1.89e-08 | 315 |
connective tissue | 2.48e-07 | 371 |