FFCP PHASE1:Hg19::chr5:169725243..169725264,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3937 | |EntrezGene=3937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6529 | |HGNC=6529 | ||
|TSSclassifier=strong | |||
|UniProt=Q13094 | |UniProt=Q13094 | ||
|association_with_transcript=-12bp_to_ENST00000046794_5end | |association_with_transcript=-12bp_to_ENST00000046794_5end | ||
|cluster_id=chr5:169725243..169725264,- | |||
|description=CAGE_peak_9_at_LCP2_5end | |description=CAGE_peak_9_at_LCP2_5end | ||
|id=chr5:169725243..169725264,- | |id=chr5:169725243..169725264,- | ||
|ontology_enrichment_celltype=CL:0000988!3.98e-59!182;CL:0000037!2.44e-58!172;CL:0000566!2.44e-58!172;CL:0002032!2.85e-54!165;CL:0000837!2.85e-54!165;CL:0000738!4.34e-49!140;CL:0000763!4.67e-43!112;CL:0000049!4.67e-43!112;CL:0002057!2.64e-42!42;CL:0002031!2.12e-40!124;CL:0002087!4.02e-39!119;CL:0000860!7.88e-39!45;CL:0000766!3.72e-38!76;CL:0000839!1.21e-31!70;CL:0000557!4.75e-31!71;CL:0002194!3.75e-26!63;CL:0000576!3.75e-26!63;CL:0000040!3.75e-26!63;CL:0000559!3.75e-26!63;CL:0002009!4.57e-25!65;CL:0000134!2.20e-18!358;CL:0002320!1.19e-17!365;CL:0000219!4.49e-15!390;CL:0000048!5.08e-12!430;CL:0000034!1.14e-11!444;CL:0000723!1.37e-11!436;CL:0000080!2.76e-11!6;CL:0000838!1.68e-10!52;CL:0002274!2.95e-10!5;CL:0000457!2.95e-10!5;CL:0002191!2.95e-10!5;CL:0000097!2.95e-10!5;CL:0000831!2.95e-10!5;CL:0002028!2.95e-10!5;CL:0000542!3.29e-10!53;CL:0000051!3.29e-10!53;CL:0000767!4.19e-07!3;CL:0000623!8.34e-07!3;CL:0000825!8.34e-07!3 | |ontology_enrichment_celltype=CL:0000988!3.98e-59!182;CL:0000037!2.44e-58!172;CL:0000566!2.44e-58!172;CL:0002032!2.85e-54!165;CL:0000837!2.85e-54!165;CL:0000738!4.34e-49!140;CL:0000763!4.67e-43!112;CL:0000049!4.67e-43!112;CL:0002057!2.64e-42!42;CL:0002031!2.12e-40!124;CL:0002087!4.02e-39!119;CL:0000860!7.88e-39!45;CL:0000766!3.72e-38!76;CL:0000839!1.21e-31!70;CL:0000557!4.75e-31!71;CL:0002194!3.75e-26!63;CL:0000576!3.75e-26!63;CL:0000040!3.75e-26!63;CL:0000559!3.75e-26!63;CL:0002009!4.57e-25!65;CL:0000134!2.20e-18!358;CL:0002320!1.19e-17!365;CL:0000219!4.49e-15!390;CL:0000048!5.08e-12!430;CL:0000034!1.14e-11!444;CL:0000723!1.37e-11!436;CL:0000080!2.76e-11!6;CL:0000838!1.68e-10!52;CL:0002274!2.95e-10!5;CL:0000457!2.95e-10!5;CL:0002191!2.95e-10!5;CL:0000097!2.95e-10!5;CL:0000831!2.95e-10!5;CL:0002028!2.95e-10!5;CL:0000542!3.29e-10!53;CL:0000051!3.29e-10!53;CL:0000767!4.19e-07!3;CL:0000623!8.34e-07!3;CL:0000825!8.34e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.25e-66;33!CL:0002057;7.25e-66;33!CL:0000473;2.08e-44;39!CL:0000234;2.08e-44;39!CL:0000576;1.30e-39;48!CL:0000766;4.14e-26;69!CL:0002087;9.38e-14;104!CL:0000763;1.37e-12;100!CL:0000738;4.85e-10;136!CL:0002393;2.64e-08;6!CL:0002397;2.64e-08;6!CL:0000988;4.05e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.79e-74,42;CL:0002057,5.79e-74,42;CL:0000473,5.43e-64,48;CL:0000234,5.43e-64,48;CL:0000839,8.95e-52,66;CL:0000557,6.37e-51,67;CL:0002194,5.01e-50,59;CL:0000576,5.01e-50,59;CL:0000040,5.01e-50,59;CL:0000559,5.01e-50,59;CL:0002009,3.18e-48,61;CL:0000766,5.19e-47,72;CL:0002031,1.44e-37,120;CL:0000763,2.25e-37,108;CL:0000049,2.25e-37,108;CL:0002087,8.42e-37,115;CL:0000738,1.21e-34,136;CL:0000037,5.15e-33,168;CL:0002032,1.25e-32,161;CL:0000837,1.25e-32,161;CL:0000988,5.60e-31,177;CL:0000134,7.65e-12,354;CL:0002320,1.81e-11,361;CL:0000219,3.78e-10,386;CL:0000034,8.93e-09,441;CL:0000048,1.56e-08,427;CL:0000723,2.60e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.45e-59;42!CL:0000049;3.25e-11;108 | |||
|ontology_enrichment_disease=DOID:2531!3.48e-12!51;DOID:0060083!3.48e-12!51;DOID:1240!4.50e-11!39;DOID:8692!2.02e-08!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.31e-33!102;UBERON:0003061!5.31e-33!102;UBERON:0002193!7.22e-29!112;UBERON:0002371!2.31e-26!80;UBERON:0001474!8.65e-24!86;UBERON:0002405!4.79e-21!115;UBERON:0004765!1.03e-18!101;UBERON:0001434!1.03e-18!101;UBERON:0002384!1.19e-16!375;UBERON:0003081!4.98e-09!216;UBERON:0002204!3.86e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.56e-10;2!UBERON:0005058;1.56e-10;2!UBERON:0009113;1.56e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.01e-44,76;UBERON:0002390,2.33e-41,98;UBERON:0003061,2.33e-41,98;UBERON:0002405,6.67e-41,93;UBERON:0001474,1.33e-40,82;UBERON:0002193,5.89e-37,108;UBERON:0004765,1.73e-36,90;UBERON:0001434,2.92e-32,100;UBERON:0002204,6.34e-17,167;UBERON:0003081,1.21e-16,203;UBERON:0002384,5.87e-11,371;UBERON:0000926,2.14e-08,315;UBERON:0004120,2.14e-08,315;UBERON:0006603,2.14e-08,315 | |||
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| ||
|short_description=p9@LCP2 | |short_description=p9@LCP2 | ||
}} | }} |
Latest revision as of 21:31, 16 September 2015
Short description: | p9@LCP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LCP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000046794_5end |
EntrezGene: | LCP2 |
HGNC: | 6529 |
UniProt: | Q13094 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.79e-74 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.79e-74 | 42 |
defensive cell | 5.43e-64 | 48 |
phagocyte | 5.43e-64 | 48 |
myeloid lineage restricted progenitor cell | 8.95e-52 | 66 |
granulocyte monocyte progenitor cell | 6.37e-51 | 67 |
monopoietic cell | 5.01e-50 | 59 |
monocyte | 5.01e-50 | 59 |
monoblast | 5.01e-50 | 59 |
promonocyte | 5.01e-50 | 59 |
macrophage dendritic cell progenitor | 3.18e-48 | 61 |
myeloid leukocyte | 5.19e-47 | 72 |
hematopoietic lineage restricted progenitor cell | 1.44e-37 | 120 |
myeloid cell | 2.25e-37 | 108 |
common myeloid progenitor | 2.25e-37 | 108 |
nongranular leukocyte | 8.42e-37 | 115 |
leukocyte | 1.21e-34 | 136 |
hematopoietic stem cell | 5.15e-33 | 168 |
hematopoietic oligopotent progenitor cell | 1.25e-32 | 161 |
hematopoietic multipotent progenitor cell | 1.25e-32 | 161 |
hematopoietic cell | 5.60e-31 | 177 |
mesenchymal cell | 7.65e-12 | 354 |
connective tissue cell | 1.81e-11 | 361 |
motile cell | 3.78e-10 | 386 |
stem cell | 8.93e-09 | 441 |
multi fate stem cell | 1.56e-08 | 427 |
somatic stem cell | 2.60e-08 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.01e-44 | 76 |
hematopoietic system | 2.33e-41 | 98 |
blood island | 2.33e-41 | 98 |
immune system | 6.67e-41 | 93 |
bone element | 1.33e-40 | 82 |
hemolymphoid system | 5.89e-37 | 108 |
skeletal element | 1.73e-36 | 90 |
skeletal system | 2.92e-32 | 100 |
musculoskeletal system | 6.34e-17 | 167 |
lateral plate mesoderm | 1.21e-16 | 203 |
connective tissue | 5.87e-11 | 371 |
mesoderm | 2.14e-08 | 315 |
mesoderm-derived structure | 2.14e-08 | 315 |
presumptive mesoderm | 2.14e-08 | 315 |