FFCP PHASE1:Hg19::chr1:29563011..29563053,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10076 | |EntrezGene=10076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9683 | |HGNC=9683 | ||
|TSSclassifier=strong | |||
|UniProt=F8W7J5,Q92729,E9PH42 | |UniProt=F8W7J5,Q92729,E9PH42 | ||
|association_with_transcript=0bp_to_ENST00000323874,ENST00000345512,ENST00000356870,ENST00000373779,NM_001195001,NM_005704,NM_133177,NM_133178,uc001bru.2,uc001brv.2,uc001brw.2,uc009vtq.2,uc009vtr.2_5end | |association_with_transcript=0bp_to_ENST00000323874,ENST00000345512,ENST00000356870,ENST00000373779,NM_001195001,NM_005704,NM_133177,NM_133178,uc001bru.2,uc001brv.2,uc001brw.2,uc009vtq.2,uc009vtr.2_5end | ||
|cluster_id=chr1:29563011..29563053,+ | |||
|description=CAGE_peak_1_at_PTPRU_5end | |description=CAGE_peak_1_at_PTPRU_5end | ||
|id=chr1:29563011..29563053,+ | |id=chr1:29563011..29563053,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.13e-17!254;CL:0000223!2.19e-10!59;CL:0002076!1.27e-08!43 | |ontology_enrichment_celltype=CL:0000066!5.13e-17!254;CL:0000223!2.19e-10!59;CL:0002076!1.27e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.39e-07;42!CL:0002368;8.13e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.53e-16,253;CL:0000223,3.65e-11,58;CL:0002076,1.52e-09,42;CL:0002368,9.75e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000223;9.86e-07;58 | |||
|ontology_enrichment_disease=DOID:305!1.76e-10!106;DOID:0050687!1.18e-08!143 | |ontology_enrichment_disease=DOID:305!1.76e-10!106;DOID:0050687!1.18e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.13e-10,106;DOID:0050687,7.60e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.16e-25!365;UBERON:0000481!4.83e-22!347;UBERON:0000064!5.96e-17!219;UBERON:0000468!7.50e-17!659;UBERON:0000924!4.28e-15!173;UBERON:0006601!4.28e-15!173;UBERON:0004121!1.43e-14!169;UBERON:0000119!3.85e-14!312;UBERON:0001048!1.30e-13!168;UBERON:0000033!1.30e-13!123;UBERON:0000483!1.67e-13!309;UBERON:0000062!3.10e-13!511;UBERON:0000922!3.25e-13!612;UBERON:0000153!2.01e-12!129;UBERON:0007811!2.01e-12!129;UBERON:0000467!4.24e-12!625;UBERON:0000480!8.26e-12!626;UBERON:0002050!8.65e-12!605;UBERON:0005423!8.65e-12!605;UBERON:0000466!9.17e-12!126;UBERON:0000923!1.10e-11!604;UBERON:0005291!1.10e-11!604;UBERON:0006598!1.10e-11!604;UBERON:0002532!1.10e-11!604;UBERON:0002346!1.92e-11!90;UBERON:0004119!2.67e-11!169;UBERON:0000925!2.67e-11!169;UBERON:0006595!2.67e-11!169;UBERON:0003075!5.66e-11!86;UBERON:0007284!5.66e-11!86;UBERON:0005177!5.57e-10!107;UBERON:0003104!1.39e-09!238;UBERON:0009142!1.39e-09!238;UBERON:0000464!2.58e-09!104;UBERON:0000477!3.43e-09!286;UBERON:0001007!5.52e-09!155;UBERON:0001555!5.52e-09!155;UBERON:0007026!5.52e-09!155;UBERON:0001004!7.02e-09!72;UBERON:0004111!7.79e-09!241;UBERON:0000077!1.50e-08!130;UBERON:0002100!2.08e-08!216;UBERON:0005743!2.33e-08!86;UBERON:0009569!3.03e-08!113;UBERON:0000063!4.51e-08!97;UBERON:0000955!5.60e-08!69;UBERON:0006238!5.60e-08!69;UBERON:0001017!5.90e-08!82;UBERON:0007023!6.13e-08!115;UBERON:0004921!7.13e-08!129;UBERON:0004185!7.13e-08!129;UBERON:0001041!1.12e-07!98;UBERON:0003056!1.28e-07!61;UBERON:0005085!1.35e-07!29;UBERON:0001049!1.68e-07!57;UBERON:0005068!1.68e-07!57;UBERON:0006241!1.68e-07!57;UBERON:0007135!1.68e-07!57;UBERON:0001444!4.39e-07!48;UBERON:0002616!5.38e-07!59;UBERON:0000025!6.69e-07!194;UBERON:0008947!7.35e-07!38;UBERON:0003258!7.35e-07!38;UBERON:0000073!8.20e-07!94;UBERON:0001016!8.20e-07!94 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.31e-14,171;UBERON:0000924,3.31e-14,171;UBERON:0006601,3.31e-14,171;UBERON:0011216,9.94e-14,223;UBERON:0010371,1.09e-12,104;UBERON:0001048,1.16e-12,160;UBERON:0004119,1.88e-11,160;UBERON:0000925,1.88e-11,160;UBERON:0006595,1.88e-11,160;UBERON:0000119,1.88e-11,309;UBERON:0000483,7.11e-11,306;UBERON:0002346,8.11e-11,86;UBERON:0003075,2.42e-10,82;UBERON:0007284,2.42e-10,82;UBERON:0005177,8.15e-10,101;UBERON:0001007,3.33e-09,145;UBERON:0001555,3.33e-09,145;UBERON:0007026,3.33e-09,145;UBERON:0001004,6.17e-09,74;UBERON:0000922,2.72e-08,592;UBERON:0001041,2.89e-08,87;UBERON:0009569,3.07e-08,112;UBERON:0004921,4.26e-08,118;UBERON:0007023,5.82e-08,114;UBERON:0004111,1.23e-07,240;UBERON:0005423,1.48e-07,581;UBERON:0010314,1.96e-07,132;UBERON:0001049,2.68e-07,56;UBERON:0005068,2.68e-07,56;UBERON:0006241,2.68e-07,56;UBERON:0007135,2.68e-07,56;UBERON:0000955,2.73e-07,68;UBERON:0006238,2.73e-07,68;UBERON:0002100,3.09e-07,199;UBERON:0001017,3.32e-07,81;UBERON:0003056,3.57e-07,61;UBERON:0000073,4.43e-07,53;UBERON:0002616,4.43e-07,53;UBERON:0008947,4.85e-07,38;UBERON:0003258,4.85e-07,38;UBERON:0001444,8.54e-07,49 | |||
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|short_description=p1@PTPRU | |short_description=p1@PTPRU | ||
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Latest revision as of 11:36, 17 September 2015
Short description: | p1@PTPRU |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTPRU_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000323874, ENST00000345512, ENST00000356870, ENST00000373779, NM_001195001, NM_005704, NM_133177, NM_133178, uc001bru.2, uc001brv.2, uc001brw.2, uc009vtq.2, uc009vtr.2_5end |
EntrezGene: | PTPRU |
HGNC: | 9683 |
UniProt: | F8W7J5Q92729E9PH42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.53e-16 | 253 |
endodermal cell | 3.65e-11 | 58 |
endo-epithelial cell | 1.52e-09 | 42 |
respiratory epithelial cell | 9.75e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.13e-10 | 106 |
cell type cancer | 7.60e-09 | 143 |