FFCP PHASE1:Hg19::chr5:39274551..39274579,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2533 | |EntrezGene=2533 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4036 | |HGNC=4036 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000503065_5end | |association_with_transcript=0bp_to_ENST00000503065_5end | ||
|cluster_id=chr5:39274551..39274579,- | |||
|description=CAGE_peak_6_at_FYB_5end | |description=CAGE_peak_6_at_FYB_5end | ||
|id=chr5:39274551..39274579,- | |id=chr5:39274551..39274579,- | ||
|ontology_enrichment_celltype=CL:0000766!2.23e-62!76;CL:0002194!1.27e-59!63;CL:0000576!1.27e-59!63;CL:0000040!1.27e-59!63;CL:0000559!1.27e-59!63;CL:0002009!2.08e-59!65;CL:0000557!3.00e-54!71;CL:0000839!3.23e-53!70;CL:0002057!2.45e-52!42;CL:0000860!1.04e-47!45;CL:0000763!2.26e-41!112;CL:0000049!2.26e-41!112;CL:0000738!1.26e-37!140;CL:0002087!3.17e-34!119;CL:0002031!4.18e-30!124;CL:0000037!1.77e-29!172;CL:0000566!1.77e-29!172;CL:0002032!2.64e-27!165;CL:0000837!2.64e-27!165;CL:0000988!2.08e-26!182;CL:0002393!2.12e-13!9;CL:0002397!2.12e-13!9;CL:0000094!9.02e-08!8 | |ontology_enrichment_celltype=CL:0000766!2.23e-62!76;CL:0002194!1.27e-59!63;CL:0000576!1.27e-59!63;CL:0000040!1.27e-59!63;CL:0000559!1.27e-59!63;CL:0002009!2.08e-59!65;CL:0000557!3.00e-54!71;CL:0000839!3.23e-53!70;CL:0002057!2.45e-52!42;CL:0000860!1.04e-47!45;CL:0000763!2.26e-41!112;CL:0000049!2.26e-41!112;CL:0000738!1.26e-37!140;CL:0002087!3.17e-34!119;CL:0002031!4.18e-30!124;CL:0000037!1.77e-29!172;CL:0000566!1.77e-29!172;CL:0002032!2.64e-27!165;CL:0000837!2.64e-27!165;CL:0000988!2.08e-26!182;CL:0002393!2.12e-13!9;CL:0002397!2.12e-13!9;CL:0000094!9.02e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.00e-56;39!CL:0000234;1.00e-56;39!CL:0000860;1.00e-54;33!CL:0002057;1.00e-54;33!CL:0000576;9.90e-53;48!CL:0000766;4.66e-40;69!CL:0000763;8.57e-20;100!CL:0002393;5.69e-15;6!CL:0002397;5.69e-15;6!CL:0002087;7.89e-14;104!CL:0000738;1.01e-13;136!CL:0000235;1.99e-13;6!CL:0000094;1.58e-12;8!CL:0000081;8.20e-09;11!CL:0000875;9.44e-09;3!CL:0002396;9.44e-09;3!CL:0002619;1.07e-08;3!CL:0000988;1.44e-08;177!CL:0000226;1.08e-07;3!CL:0000842;1.08e-07;3!CL:0000767;2.27e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.31e-100,72;CL:0002194,4.54e-96,59;CL:0000576,4.54e-96,59;CL:0000040,4.54e-96,59;CL:0000559,4.54e-96,59;CL:0002009,4.79e-96,61;CL:0000473,1.28e-94,48;CL:0000234,1.28e-94,48;CL:0000557,3.49e-86,67;CL:0000839,2.07e-84,66;CL:0000860,4.20e-82,42;CL:0002057,4.20e-82,42;CL:0000763,7.66e-66,108;CL:0000049,7.66e-66,108;CL:0000738,6.58e-57,136;CL:0002087,2.52e-50,115;CL:0000037,2.33e-44,168;CL:0002031,2.14e-43,120;CL:0000988,3.22e-41,177;CL:0002032,2.95e-40,161;CL:0000837,2.95e-40,161;CL:0002393,5.85e-22,9;CL:0002397,5.85e-22,9;CL:0000235,2.43e-13,6;CL:0000134,8.96e-13,354;CL:0000094,1.32e-12,8;CL:0002320,3.31e-12,361;CL:0000219,3.19e-10,386;CL:0000081,7.26e-09,11;CL:0000875,9.21e-09,3;CL:0002396,9.21e-09,3;CL:0002619,1.09e-08,3;CL:0000048,7.63e-08,427;CL:0000226,1.07e-07,3;CL:0000842,1.07e-07,3;CL:0000723,1.60e-07,433;CL:0000767,2.30e-07,3;CL:0000034,4.16e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.37e-58;42!CL:0000049;3.23e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.52e-54!102;UBERON:0003061!6.52e-54!102;UBERON:0002193!3.84e-50!112;UBERON:0002371!1.03e-45!80;UBERON:0001474!4.99e-41!86;UBERON:0002405!3.13e-37!115;UBERON:0004765!3.97e-34!101;UBERON:0001434!3.97e-34!101;UBERON:0007023!1.10e-26!115;UBERON:0003081!2.17e-19!216;UBERON:0002204!1.78e-15!167;UBERON:0000062!7.17e-08!511;UBERON:0000178!6.17e-07!15;UBERON:0000179!6.17e-07!15;UBERON:0000463!6.17e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.88e-78,98;UBERON:0003061,6.88e-78,98;UBERON:0002371,2.81e-74,76;UBERON:0002193,3.57e-74,108;UBERON:0002405,1.30e-68,93;UBERON:0001474,8.88e-68,82;UBERON:0004765,1.89e-60,90;UBERON:0001434,6.28e-53,100;UBERON:0003081,3.91e-30,203;UBERON:0002204,5.59e-27,167;UBERON:0000926,1.26e-16,315;UBERON:0004120,1.26e-16,315;UBERON:0006603,1.26e-16,315;UBERON:0002384,4.62e-12,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,3.45446458287491,6.65709330259127,0,0,0,0,0,0,7.20194031091441,6.01633342410425,7.37836960433896,22.8393783724723,19.4336199611388,27.0454346015896,12.0680538187039,4.91238726795452,5.82201746850759,6.0431549595478,0.411167888021826,4.33588919253145,6.32923263108731,7.94098190240212,12.0605937243178,6.89491361473237,6.45484683583826,8.12558919566051,4.89430082810772,3.547779950752,2.47195832889593,6.12167784741805,2.24650318953266,7.67204550958849,14.5134572082155,12.7656740877844,18.7538890234385,4.06292934080018,0.56738522469114,4.35975574296902,9.79869794501299,5.73631210262222,12.8141418376019,4.23779651843358,2.57794345191295,5.06339819905415,19.4354863406986,30.8276234949313,16.5630329951617,6.29040334420373,8.40990599912435,12.5365957623723,27.6462361429011,28.4450848394699,20.8237135291683,0,0,0,1.28019066769952,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,3.8945687238562,4.87563264437948,6.51494006542439,0.238490624305342,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.436011505254,4.21207677250628,16.943952500915,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,5.52482800575339,2.10833939483032,0,0,0,0,0,0,0,0,0.215627574859517,0.77005821767849,0,0,0,0,0,2.99602809578873,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58273670531796,5.60856922128404,6.29692591040322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36994326789761,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,1.97701981631236,0,0,0,0,0.507447609232169,0.764637207142375,4.5571774973933,3.33524485640905,2.87953591160336,0,0.540031437238115,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0.447352215784832,0,0.19538809540204,0,0,0.270455678475983,0,1.4098700508785,0,2.3441308683503,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,1.10513566212459,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.846452843541768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14994833854341,1.22206028986725,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0.30607276163049,29.3185729476184,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.698906672968121,0,0,0,0,0.678923115418936,0,0.225980740780532,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.916641696046735,0,0,0.429226048136571,0.446342914883745,0.268733889946905,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,1.349843349309,0,0.0607495566580247,0,0.630445658393585,0.157363764404994,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,2.05173127149315,0,0.258565912723101,0.13223260174269,0,0,2.88326013932776,0,0,5.45782623993146,0,0,0,0.544017803369474,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0.0675375846183947,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0.443511850813194,0,0,0.135939465953663,0.0657727735628491,0,0,1.72684804271131,0,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.615976841137482,0,0,0,0,0,0,0,0,1.389134845943,0.437119121007915,0,0.490296643507811,0,0.196308467114945,0,0.4226557275834,0,17.0110891543535,9.86205685995731,0,0,0,0,0.730336388246517,0.458729283404541,0.286679166302903,0,0.135982980381829,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,1.06090177505535,0,0,0.413731983447581,0.213233981900981,0,0.516711278688049,0.993195428733726,0,0.445530107947154,0.202117188958219,0,0.342233301085281,1.27968900727716,1.07583308089015,0,0,0,0,0,0,0.366724332548599,0,0,1.00636896795513,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54027849164014,3.45446458287491,6.65709330259127,0,0,0,0,0,0,7.20194031091441,6.01633342410425,7.37836960433896,22.8393783724723,19.4336199611388,27.0454346015896,12.0680538187039,4.91238726795452,5.82201746850759,6.0431549595478,0.411167888021826,4.33588919253145,6.32923263108731,7.94098190240212,12.0605937243178,6.89491361473237,6.45484683583826,8.12558919566051,4.89430082810772,3.547779950752,2.47195832889593,6.12167784741805,2.24650318953266,7.67204550958849,14.5134572082155,12.7656740877844,18.7538890234385,4.06292934080018,0.56738522469114,4.35975574296902,9.79869794501299,5.73631210262222,12.8141418376019,4.23779651843358,2.57794345191295,5.06339819905415,19.4354863406986,30.8276234949313,16.5630329951617,6.29040334420373,8.40990599912435,12.5365957623723,27.6462361429011,28.4450848394699,20.8237135291683,0,0,0,1.28019066769952,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,3.8945687238562,4.87563264437948,6.51494006542439,0.238490624305342,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.436011505254,4.21207677250628,16.943952500915,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,5.52482800575339,2.10833939483032,0,0,0,0,0,0,0,0,0.215627574859517,0.77005821767849,0,0,0,0,0,2.99602809578873,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58273670531796,5.60856922128404,6.29692591040322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36994326789761,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,1.97701981631236,0,0,0,0,0.507447609232169,0.764637207142375,4.5571774973933,3.33524485640905,2.87953591160336,0,0.540031437238115,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0.447352215784832,0,0.19538809540204,0,0,0.270455678475983,0,1.4098700508785,0,2.3441308683503,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,1.10513566212459,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.846452843541768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14994833854341,1.22206028986725,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0.30607276163049,29.3185729476184,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.698906672968121,0,0,0,0,0.678923115418936,0,0.225980740780532,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.916641696046735,0,0,0.429226048136571,0.446342914883745,0.268733889946905,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,1.349843349309,0,0.0607495566580247,0,0.630445658393585,0.157363764404994,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,2.05173127149315,0,0.258565912723101,0.13223260174269,0,0,2.88326013932776,0,0,5.45782623993146,0,0,0,0.544017803369474,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0.0675375846183947,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0.443511850813194,0,0,0.135939465953663,0.0657727735628491,0,0,1.72684804271131,0,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.615976841137482,0,0,0,0,0,0,0,0,1.389134845943,0.437119121007915,0,0.490296643507811,0,0.196308467114945,0,0.4226557275834,0,17.0110891543535,9.86205685995731,0,0,0,0,0.730336388246517,0.458729283404541,0.286679166302903,0,0.135982980381829,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,1.06090177505535,0,0,0.413731983447581,0.213233981900981,0,0.516711278688049,0.993195428733726,0,0.445530107947154,0.202117188958219,0,0.342233301085281,1.27968900727716,1.07583308089015,0,0,0,0,0,0,0.366724332548599,0,0,1.00636896795513,0 | ||
|short_description=p6@FYB | |short_description=p6@FYB | ||
}} | }} |
Latest revision as of 21:02, 17 September 2015
Short description: | p6@FYB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FYB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000503065_5end |
EntrezGene: | FYB |
HGNC: | 4036 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.88e-78 | 98 |
blood island | 6.88e-78 | 98 |
bone marrow | 2.81e-74 | 76 |
hemolymphoid system | 3.57e-74 | 108 |
immune system | 1.30e-68 | 93 |
bone element | 8.88e-68 | 82 |
skeletal element | 1.89e-60 | 90 |
skeletal system | 6.28e-53 | 100 |
lateral plate mesoderm | 3.91e-30 | 203 |
musculoskeletal system | 5.59e-27 | 167 |
mesoderm | 1.26e-16 | 315 |
mesoderm-derived structure | 1.26e-16 | 315 |
presumptive mesoderm | 1.26e-16 | 315 |
connective tissue | 4.62e-12 | 371 |