FFCP PHASE1:Hg19::chr5:40968730..40968733,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:40968730..40968733,+ | |||
|coexpression_cluster_id=C401 | |||
|description=CAGE_peak_at_chr5:40968730..40968733,+ | |description=CAGE_peak_at_chr5:40968730..40968733,+ | ||
|id=chr5:40968730..40968733,+ | |id=chr5:40968730..40968733,+ | ||
|ontology_enrichment_celltype=CL:0002549!2.39e-07!2 | |ontology_enrichment_celltype=CL:0002549!2.39e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002549;9.07e-18;2!CL:0000746;1.85e-12;3!CL:0000737;1.12e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,7.67e-18,2;CL:0000746,1.85e-12,3;CL:0000513,1.85e-12,3;CL:0000737,1.12e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.05e-34;1!CL:0000513;1.85e-12;3!UBERON:0003056;2.59e-12;3 | |||
|ontology_enrichment_disease=DOID:114!6.56e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.53e-22!115;UBERON:0003103!3.94e-10!69;UBERON:0003947!2.39e-07!2;UBERON:0005629!2.39e-07!2;UBERON:0005358!2.39e-07!2;UBERON:0001886!2.39e-07!2;UBERON:0004086!2.39e-07!2;UBERON:0005282!2.39e-07!2;UBERON:0005281!2.39e-07!2;UBERON:0007100!2.73e-07!27;UBERON:0003127!9.83e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.05e-34;1!UBERON:0002171;5.05e-34;1!UBERON:0001785;5.05e-34;1!UBERON:0002464;5.05e-34;1!UBERON:0004904;5.05e-34;1!UBERON:0001021;5.05e-34;1!UBERON:0006518;5.05e-34;1!UBERON:0008949;5.05e-34;1!UBERON:0000101;5.05e-34;1!UBERON:0002167;5.05e-34;1!UBERON:0003714;9.07e-18;2!UBERON:0005162;9.07e-18;2!UBERON:0000122;9.07e-18;2!UBERON:0005629;9.07e-18;2!UBERON:0005358;9.07e-18;2!UBERON:0001886;9.07e-18;2!UBERON:0004086;9.07e-18;2!UBERON:0005282;9.07e-18;2!UBERON:0005281;9.07e-18;2!UBERON:0005284;6.55e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.58e-34,1;UBERON:0001785,2.58e-34,1;UBERON:0002464,2.58e-34,1;UBERON:0004904,2.58e-34,1;UBERON:0001021,2.58e-34,1;UBERON:0003902,2.58e-34,1;UBERON:0005425,2.58e-34,1;UBERON:0002171,5.05e-34,1;UBERON:0006518,5.05e-34,1;UBERON:0008949,5.05e-34,1;UBERON:0000101,5.05e-34,1;UBERON:0002167,5.05e-34,1;UBERON:0003714,6.48e-18,2;UBERON:0005162,6.48e-18,2;UBERON:0000122,6.48e-18,2;UBERON:0005629,7.67e-18,2;UBERON:0005358,7.67e-18,2;UBERON:0001886,7.67e-18,2;UBERON:0004086,7.67e-18,2;UBERON:0005282,7.67e-18,2;UBERON:0005281,7.67e-18,2;UBERON:0001781,1.22e-09,4;UBERON:0005284,6.13e-08,5;UBERON:0000966,7.58e-07,6;UBERON:0005388,7.58e-07,6;UBERON:0001802,7.58e-07,6 | |||
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| ||
|short_description=p@chr5:40968730..40968733,+ | |short_description=p@chr5:40968730..40968733,+ | ||
}} | }} |
Latest revision as of 14:50, 30 July 2015
Short description: | p@chr5:40968730..40968733, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:40968730..40968733, + |
Coexpression cluster: | C401_Cardiac_pineal_occipital_globus_Hepatocyte_Osteoblast_hippocampus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 7.67e-18 | 2 |
cardiac muscle cell | 1.85e-12 | 3 |
cardiac muscle myoblast | 1.85e-12 | 3 |
striated muscle cell | 1.12e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.58e-34 | 1 |
cranial nerve | 2.58e-34 | 1 |
nerve trunk | 2.58e-34 | 1 |
nerve connecting eye with brain | 2.58e-34 | 1 |
nerve | 2.58e-34 | 1 |
retinal neural layer | 2.58e-34 | 1 |
presumptive neural retina | 2.58e-34 | 1 |
lower lobe of right lung | 5.05e-34 | 1 |
right lung lobe | 5.05e-34 | 1 |
lower lobe of lung | 5.05e-34 | 1 |
lobe of lung | 5.05e-34 | 1 |
right lung | 5.05e-34 | 1 |
neural tissue | 6.48e-18 | 2 |
multi cell component structure | 6.48e-18 | 2 |
neuron projection bundle | 6.48e-18 | 2 |
vascular plexus | 7.67e-18 | 2 |
ventricle of nervous system | 7.67e-18 | 2 |
choroid plexus | 7.67e-18 | 2 |
brain ventricle | 7.67e-18 | 2 |
ventricular system of brain | 7.67e-18 | 2 |
ventricular system of central nervous system | 7.67e-18 | 2 |
layer of retina | 1.22e-09 | 4 |
brain vasculature | 6.13e-08 | 5 |
retina | 7.58e-07 | 6 |
photoreceptor array | 7.58e-07 | 6 |
posterior segment of eyeball | 7.58e-07 | 6 |