FFCP PHASE1:Hg19::chr12:96589952..96589968,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:96589952..96589968,+
|short_description=p@chr12:96589952..96589968,+
|description=CAGE_peak_at_chr12:96589952..96589968,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:96589952..96589968,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:96589952..96589968,+ | |||
|id=chr12:96589952..96589968,+ | |||
|ontology_enrichment_celltype=CL:0002371!1.70e-11!591;CL:0000144!1.47e-09!625;CL:0002057!6.50e-09!42;CL:0000548!2.05e-08!679;CL:0000004!2.05e-08!679;CL:0000255!2.05e-08!679;CL:0000012!3.14e-08!682;CL:0000860!5.69e-08!45;CL:0000071!4.79e-07!18;CL:0002546!4.79e-07!18;CL:0000003!5.99e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.42e-22;33!CL:0002057;6.42e-22;33!CL:0002393;1.21e-16;6!CL:0002397;1.21e-16;6!CL:0000576;1.88e-16;48!CL:0000473;9.39e-16;39!CL:0000234;9.39e-16;39!CL:0000766;1.06e-13;69!CL:0000228;1.13e-11;1!CL:0002372;1.13e-11;1!CL:0002087;8.28e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.50e-34,42;CL:0002057,1.50e-34,42;CL:0000473,5.00e-30,48;CL:0000234,5.00e-30,48;CL:0002194,1.09e-23,59;CL:0000576,1.09e-23,59;CL:0000040,1.09e-23,59;CL:0000559,1.09e-23,59;CL:0002009,7.18e-23,61;CL:0000839,4.89e-21,66;CL:0000557,1.06e-20,67;CL:0000766,3.63e-19,72;CL:0002087,1.75e-13,115;CL:0000763,2.96e-12,108;CL:0000049,2.96e-12,108;CL:0000228,9.61e-12,1;CL:0002372,9.61e-12,1;CL:0002393,2.69e-11,9;CL:0002397,2.69e-11,9;CL:0000738,4.08e-11,136;CL:0002031,7.32e-11,120;CL:0000037,1.24e-08,168;CL:0000988,4.28e-08,177;CL:0002032,1.19e-07,161;CL:0000837,1.19e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.49e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001981!2.81e-08!60;UBERON:0007500!2.81e-08!60;UBERON:0004537!2.81e-08!60;UBERON:0006965!2.81e-08!60;UBERON:0003081!5.52e-08!216;UBERON:0004535!7.55e-08!110;UBERON:0001009!2.10e-07!113;UBERON:0002049!2.19e-07!79;UBERON:0007798!2.19e-07!79;UBERON:0000055!3.25e-07!69;UBERON:0001986!4.79e-07!18;UBERON:0004638!4.79e-07!18;UBERON:0004852!4.79e-07!18 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.41e-18,76;UBERON:0001474,1.20e-16,82;UBERON:0002390,3.94e-16,98;UBERON:0003061,3.94e-16,98;UBERON:0004765,4.96e-15,90;UBERON:0002405,1.70e-14,93;UBERON:0002193,1.79e-14,108;UBERON:0001434,2.29e-13,100;UBERON:0002204,1.03e-08,167;UBERON:0003081,4.75e-08,203 | |||
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| ||
|short_description=p@chr12:96589952..96589968,+ | |||
}} | }} |
Latest revision as of 13:53, 24 July 2015
Short description: | p@chr12:96589952..96589968, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:96589952..96589968, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.50e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.50e-34 | 42 |
defensive cell | 5.00e-30 | 48 |
phagocyte | 5.00e-30 | 48 |
monopoietic cell | 1.09e-23 | 59 |
monocyte | 1.09e-23 | 59 |
monoblast | 1.09e-23 | 59 |
promonocyte | 1.09e-23 | 59 |
macrophage dendritic cell progenitor | 7.18e-23 | 61 |
myeloid lineage restricted progenitor cell | 4.89e-21 | 66 |
granulocyte monocyte progenitor cell | 1.06e-20 | 67 |
myeloid leukocyte | 3.63e-19 | 72 |
nongranular leukocyte | 1.75e-13 | 115 |
myeloid cell | 2.96e-12 | 108 |
common myeloid progenitor | 2.96e-12 | 108 |
multinucleate cell | 9.61e-12 | 1 |
myotube | 9.61e-12 | 1 |
intermediate monocyte | 2.69e-11 | 9 |
CD14-positive, CD16-positive monocyte | 2.69e-11 | 9 |
leukocyte | 4.08e-11 | 136 |
hematopoietic lineage restricted progenitor cell | 7.32e-11 | 120 |
hematopoietic stem cell | 1.24e-08 | 168 |
hematopoietic cell | 4.28e-08 | 177 |
hematopoietic oligopotent progenitor cell | 1.19e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.19e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.41e-18 | 76 |
bone element | 1.20e-16 | 82 |
hematopoietic system | 3.94e-16 | 98 |
blood island | 3.94e-16 | 98 |
skeletal element | 4.96e-15 | 90 |
immune system | 1.70e-14 | 93 |
hemolymphoid system | 1.79e-14 | 108 |
skeletal system | 2.29e-13 | 100 |
musculoskeletal system | 1.03e-08 | 167 |
lateral plate mesoderm | 4.75e-08 | 203 |