FFCP PHASE1:Hg19::chr13:110829341..110829354,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:110829341..110829354,-
|short_description=p@chr13:110829341..110829354,-
|description=CAGE_peak_at_chr13:110829341..110829354,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:110829341..110829354,- | |||
|coexpression_cluster_id=C566 | |||
|description=CAGE_peak_at_chr13:110829341..110829354,- | |||
|id=chr13:110829341..110829354,- | |||
|ontology_enrichment_celltype=CL:0000222!1.06e-11!119;CL:0000055!3.82e-09!180;CL:1000449!6.34e-09!16;CL:1000497!2.69e-07!18;CL:0002518!2.69e-07!18;CL:0000213!2.90e-07!57;CL:0000215!2.90e-07!57;CL:0002681!5.02e-07!13;CL:0002584!5.02e-07!13;CL:0000057!6.10e-07!75;CL:0000630!6.27e-07!9;CL:0000183!8.87e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:1000449;3.77e-11;15!CL:0000115;6.56e-11;36!CL:1000746;1.13e-09;7!CL:1000612;1.13e-09;7!CL:1000497;1.43e-09;17!CL:0002518;1.43e-09;17!CL:0002681;3.87e-09;12!CL:0002584;3.87e-09;12!CL:0000349;1.13e-08;19!CL:0002138;3.14e-08;6!CL:0000669;5.74e-08;4!CL:0000213;6.23e-08;58!CL:0000215;6.23e-08;58!CL:0002139;9.97e-08;24!CL:0002615;3.72e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,6.29e-13,58;CL:0000215,6.29e-13,58;CL:0000115,1.31e-11,36;CL:1000449,4.44e-11,15;CL:0002078,1.20e-09,45;CL:1000746,1.57e-09,7;CL:1000612,1.57e-09,7;CL:1000497,1.65e-09,17;CL:0002518,1.65e-09,17;CL:0002681,5.36e-09,12;CL:0002584,5.36e-09,12;CL:0000222,9.87e-09,121;CL:0000349,1.21e-08,19;CL:0005020,4.04e-08,6;CL:0002138,4.04e-08,6;CL:0005022,4.04e-08,6;CL:0000669,9.17e-08,4;CL:0002139,1.59e-07,24;CL:0002615,4.16e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;3.14e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.61e-12!79;UBERON:0007798!2.61e-12!79;UBERON:0001009!3.72e-11!113;UBERON:0003914!1.09e-10!118;UBERON:0004535!1.14e-10!110;UBERON:0005256!9.84e-10!143;UBERON:0004876!1.67e-09!20;UBERON:0000353!2.03e-09!17;UBERON:0003064!2.17e-09!37;UBERON:0006555!2.99e-09!17;UBERON:0005103!2.99e-09!17;UBERON:0000083!2.99e-09!17;UBERON:0009201!2.99e-09!17;UBERON:0004819!2.99e-09!17;UBERON:0006553!2.99e-09!17;UBERON:0003074!2.99e-09!17;UBERON:0003060!2.99e-09!17;UBERON:0004872!4.63e-09!84;UBERON:0000055!5.19e-09!69;UBERON:0004211!6.34e-09!16;UBERON:0001285!6.34e-09!16;UBERON:0007684!6.34e-09!16;UBERON:0003220!6.34e-09!16;UBERON:0004208!6.34e-09!16;UBERON:0003886!1.24e-08!63;UBERON:0000080!2.16e-08!18;UBERON:0002120!2.16e-08!18;UBERON:0004875!2.16e-08!18;UBERON:0005721!2.16e-08!18;UBERON:0005754!2.16e-08!18;UBERON:0007297!2.16e-08!18;UBERON:0002100!2.19e-08!216;UBERON:0003887!2.45e-08!21;UBERON:0000477!4.45e-08!286;UBERON:0000468!1.36e-07!659;UBERON:0002553!1.88e-07!70;UBERON:0001225!5.02e-07!13;UBERON:0008987!5.02e-07!13;UBERON:0001473!7.03e-07!8;UBERON:0004536!7.03e-07!8;UBERON:0006558!7.03e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.50e-11;8!UBERON:0004536;1.50e-11;8!UBERON:0006558;1.50e-11;8!UBERON:0000353;2.73e-11;15!UBERON:0006555;3.77e-11;15!UBERON:0004819;3.77e-11;15!UBERON:0001285;3.77e-11;15!UBERON:0007684;3.77e-11;15!UBERON:0000074;1.13e-09;7!UBERON:0001229;1.13e-09;7!UBERON:0000478;1.86e-09;24!UBERON:0001225;3.87e-09;12!UBERON:0008987;3.87e-09;12!UBERON:0002465;5.51e-09;10!UBERON:0001851;5.25e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.88e-11,8;UBERON:0004536,1.88e-11,8;UBERON:0006558,1.88e-11,8;UBERON:0000353,3.38e-11,15;UBERON:0004211,4.44e-11,15;UBERON:0009773,4.44e-11,15;UBERON:0001231,4.44e-11,15;UBERON:0001285,4.44e-11,15;UBERON:0007684,4.44e-11,15;UBERON:0004208,4.44e-11,15;UBERON:0006555,3.04e-10,16;UBERON:0004819,3.04e-10,16;UBERON:0010532,1.57e-09,7;UBERON:0000074,1.57e-09,7;UBERON:0001229,1.57e-09,7;UBERON:0001230,1.57e-09,7;UBERON:0003220,1.57e-09,7;UBERON:0005749,1.57e-09,7;UBERON:0004199,1.57e-09,7;UBERON:0004209,1.57e-09,7;UBERON:0004198,1.57e-09,7;UBERON:0003914,1.70e-09,117;UBERON:0000478,2.20e-09,24;UBERON:0002049,3.05e-09,78;UBERON:0007798,3.05e-09,78;UBERON:0001225,5.36e-09,12;UBERON:0008987,5.36e-09,12;UBERON:0002465,6.55e-09,10;UBERON:0001009,1.38e-08,112;UBERON:0000055,1.59e-08,68;UBERON:0004535,2.96e-08,109;UBERON:0005103,3.10e-08,8;UBERON:0000083,3.10e-08,8;UBERON:0009201,3.10e-08,8;UBERON:0006553,3.10e-08,8;UBERON:0003074,3.10e-08,8;UBERON:0003060,3.10e-08,8;UBERON:0004876,1.17e-07,11;UBERON:0000080,3.16e-07,9;UBERON:0002120,3.16e-07,9;UBERON:0004875,3.16e-07,9;UBERON:0005721,3.16e-07,9;UBERON:0005754,3.16e-07,9;UBERON:0007297,3.16e-07,9;UBERON:0002417,3.20e-07,60;UBERON:0000916,3.20e-07,60;UBERON:0001851,6.73e-07,15;UBERON:0000058,9.32e-07,19 | |||
|phase1_expression=1.2717486548939,10.0627246228762,2.25527046553554,4.00293193412522,3.5756887554183,0.872338524100369,0,0,3.91778442299758,0.737201809504527,0.697801167972428,0,1.05506791291381,0.123766352960047,0.662794751455832,1.34465029290355,1.20538905604795,0.730310090387373,0.487932798790507,0.123121058076788,0.204000691244253,0.626909442956176,0,0.136874425072884,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.289693037921647,0,0,0.283604451492204,0.886917589850256,0.614843499851882,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,1.25849830862972,4.40188867104108,1.04497483268405,0.516833518338658,1.06729878806013,1.33888245105868,1.20848795132744,0,7.56592378399325,0,6.48113558305408,0.357198913136319,0.44905874525234,0.337834441449967,0,0,0,0,0,0,4.96971951695318,1.77282716330412,0.264818361626438,0.286836620748814,0,0.560677600142307,2.1349799145941,12.0867098724408,0,2.2900814251847,2.28846664358842,1.81628913173918,1.72852777344,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,0,2.47266929278557,2.73048408581408,2.15585442544872,0,0.375355559615893,0,0.438977620880838,0.919463387397059,0.600952235626387,1.70148274740032,1.07633781413317,0,0.211931901159562,0.600182192168805,0.103052529238439,1.03056216018252,0.558350568994769,0.168776332241266,0.487185025805993,0.252433774244115,0.460249493211497,0,0,0.403008392910561,0.508681776931463,0,0,0,0,0,0.232387885739037,0.518305275076852,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0,0,0,0,2.95262181849859,4.20725321410337,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0.469634776943287,4.90845922387651,2.31492756288305,4.75635380586496,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0.300343057843917,0.285826432630578,0.560655421726804,3.05172048183296,1.9067954313447,0.646358578788889,0,0,4.25500986535793,5.2003718455683,0,0,0,2.7165818795048,2.17048642156577,3.29296134712308,0.977208552881205,2.13235169245527,0,1.80863626235752,0,3.09916272664377,0,0,0,2.15662369942424,5.7430967917057,0,1.01346914667305,0.821905290201534,0,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,1.87173775377726,4.10386674233472,1.26161932027148,0.702848489956279,0,0,0,1.99267679560631,0.368738337083406,0.173767228936166,1.37060810223918,3.77457766191941,0,0,0,0,1.66435439510497,0,0.248107807818777,0.153461973288062,1.68396056659844,0.896974044789907,0.511707249066704,6.11244900345709,0,0.308419387605311,0.355123450626254,0,1.55776328755086,0.116210378459959,0,1.60405176242628,0.0920809889358963,0.459257792658427,0.910455840033585,0.262248829918848,0.451199612907412,1.15523005656622,0.784349769176855,2.92278449306521,2.53323909342902,4.54933536283586,1.53084334748864,1.51141141271498,6.16909010761157,1.08378575017541,2.00675909541941,0.254876273045038,0,2.68649705666614,0,0,0.256450125116389,0,0.325378394664303,0.618246069886334,0,0,0,0,1.6068392984416,0.096670718292122,0.616194468458578,0.614014698904518,0.137836572484531,0.107420244868274,1.30515024522806,0.681813019328807,0.0890320356467374,0.165284915360978,0.768760269460425,0.255225424989168,0.2023155617111,0,0.62962469366128,0,0.308033580176089,0,0,0,0.286249773483982,0.744316738719335,0.316379424718726,1.90630193923825,0,0.42793898803392,0,0,0.179872457583315,1.09814811894422,0.353437207037059,0.202182481573316,0,0,0.975267478179181,1.94970791705028,0,0.409499734223957,0.565621727814851,0,0,1.32687795048244,0.876901770507525,0,0,0.405820753925408,0.6196469961995,0.281695602532241,0.143411352204052,0.687743287091848,1.07001315444375,0,0,0,0.379473173765715,0,0,0,0,0.659006605437454,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0,0.597743964753209,0.552567831062295,0,0.102268682502155,0,1.86623752597084,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0.291604613383254,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0,0.153900517007594,0.227884111694002,0,0.359030577639089,0.217294743844016,0.957003479195758,1.64875668123352,2.66517388009317,0,0,0,0,0,0,0,0,1.05499032264014,0.816164040795739,0,0,0.995261931078505,0,0,0,0.123563938946503,0.208843899010911,0,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0.330991955875499,0,0,0.284609546029793,0,0,0,0,0.52418000472609,0,0,0,0.0821154570532092,0.387956065953678,0,1.80784592624426,0,0,0,0.195551382734803,0,0.85381197895741,0,0,0,0,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0,0,0.798716001995964,2.14613024068285,0,0.53746777989381,5.76479813667846,0,0,0,0,0,0,0,0,0.160753148465019,0.13753943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| ||
|short_description=p@chr13:110829341..110829354,- | |||
}} | }} |
Latest revision as of 14:29, 24 July 2015
Short description: | p@chr13:110829341..110829354, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:110829341..110829354, - |
Coexpression cluster: | C566_Pericytes_Renal_hepatic_Fibroblast_Endothelial_Hepatic_Lens |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 6.29e-13 | 58 |
barrier cell | 6.29e-13 | 58 |
endothelial cell | 1.31e-11 | 36 |
epithelial cell of nephron | 4.44e-11 | 15 |
meso-epithelial cell | 1.20e-09 | 45 |
glomerular cell | 1.57e-09 | 7 |
kidney corpuscule cell | 1.57e-09 | 7 |
kidney cell | 1.65e-09 | 17 |
kidney epithelial cell | 1.65e-09 | 17 |
kidney cortical cell | 5.36e-09 | 12 |
renal cortical epithelial cell | 5.36e-09 | 12 |
mesodermal cell | 9.87e-09 | 121 |
extraembryonic cell | 1.21e-08 | 19 |
lymphangioblast | 4.04e-08 | 6 |
endothelial cell of lymphatic vessel | 4.04e-08 | 6 |
vascular lymphangioblast | 4.04e-08 | 6 |
pericyte cell | 9.17e-08 | 4 |
endothelial cell of vascular tree | 1.59e-07 | 24 |
adipocyte of omentum tissue | 4.16e-07 | 3 |