FFCP PHASE1:Hg19::chr13:114898016..114898113,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:114898016..114898113,-
|short_description=p1@RASA3
|description=CAGE_peak_1_at_RASA3_5end
|association_with_transcript=0bp_to_ENST00000334062,ENST00000542...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22821 | |EntrezGene=22821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20331 | |HGNC=20331 | ||
|TSSclassifier=strong | |||
|UniProt=Q14644,B7Z3G9 | |UniProt=Q14644,B7Z3G9 | ||
|association_with_transcript=0bp_to_ENST00000334062,ENST00000542651,NM_007368,uc001vui.2,uc001vuj.2,uc010tkl.1_5end | |||
|cluster_id=chr13:114898016..114898113,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_RASA3_5end | |||
|id=chr13:114898016..114898113,- | |||
|ontology_enrichment_celltype=CL:0000048!4.60e-22!430;CL:0002320!3.73e-20!365;CL:0000723!1.03e-19!436;CL:0000134!4.21e-19!358;CL:0000034!1.21e-18!444;CL:0000219!3.26e-16!390;CL:0002057!1.07e-15!42;CL:0000738!3.02e-14!140;CL:0002087!2.64e-13!119;CL:0000988!5.23e-13!182;CL:0000037!5.95e-13!172;CL:0000566!5.95e-13!172;CL:0000766!1.05e-12!76;CL:0000860!1.23e-12!45;CL:0002032!1.40e-12!165;CL:0000837!1.40e-12!165;CL:0000791!1.50e-12!18;CL:0000789!1.50e-12!18;CL:0002420!1.50e-12!18;CL:0002419!1.50e-12!18;CL:0000790!1.50e-12!18;CL:0002031!3.95e-12!124;CL:0002371!8.01e-10!591;CL:0000557!1.77e-09!71;CL:0000839!5.15e-09!70;CL:0000763!1.09e-08!112;CL:0000049!1.09e-08!112;CL:0002194!1.17e-08!63;CL:0000576!1.17e-08!63;CL:0000040!1.17e-08!63;CL:0000559!1.17e-08!63;CL:0000625!2.15e-08!11;CL:0002009!6.84e-08!65;CL:0000057!9.75e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.48e-12;18!CL:0000789;1.48e-12;18!CL:0002419;1.48e-12;18!CL:0000860;5.21e-12;33!CL:0002057;5.21e-12;33!CL:0000576;6.54e-09;48!CL:0000473;8.98e-09;39!CL:0000234;8.98e-09;39!CL:0000625;2.13e-08;11!CL:0000766;2.45e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,8.06e-23,427;CL:0002320,4.24e-21,361;CL:0000723,2.06e-20,433;CL:0000134,5.01e-20,354;CL:0000034,2.56e-19,441;CL:0000219,5.05e-17,386;CL:0000738,7.44e-16,136;CL:0000860,1.07e-15,42;CL:0002057,1.07e-15,42;CL:0002087,5.16e-15,115;CL:0000766,6.92e-15,72;CL:0000037,2.70e-14,168;CL:0000988,5.47e-14,177;CL:0002032,6.29e-14,161;CL:0000837,6.29e-14,161;CL:0000473,7.31e-14,48;CL:0000234,7.31e-14,48;CL:0002031,1.07e-13,120;CL:0000791,1.50e-12,18;CL:0000789,1.50e-12,18;CL:0002420,1.50e-12,18;CL:0002419,1.50e-12,18;CL:0000790,1.50e-12,18;CL:0000557,2.43e-11,67;CL:0000839,7.89e-11,66;CL:0002194,1.51e-10,59;CL:0000576,1.51e-10,59;CL:0000040,1.51e-10,59;CL:0000559,1.51e-10,59;CL:0000763,5.40e-10,108;CL:0000049,5.40e-10,108;CL:0002009,1.26e-09,61;CL:0000625,2.15e-08,11;CL:0000057,9.30e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000790;1.48e-12;18!CL:0002057;1.20e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.24e-19!375;UBERON:0002193!7.12e-15!112;UBERON:0003081!7.80e-14!216;UBERON:0002390!1.39e-13!102;UBERON:0003061!1.39e-13!102;UBERON:0004535!2.94e-10!110;UBERON:0001009!2.57e-09!113;UBERON:0002204!8.42e-09!167;UBERON:0002371!1.08e-08!80;UBERON:0002049!3.15e-08!79;UBERON:0007798!3.15e-08!79;UBERON:0001474!1.14e-07!86;UBERON:0002405!1.43e-07!115;UBERON:0004765!2.94e-07!101;UBERON:0001434!2.94e-07!101;UBERON:0000055!9.59e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.50e-20,371;UBERON:0002193,9.38e-17,108;UBERON:0002390,1.84e-15,98;UBERON:0003061,1.84e-15,98;UBERON:0003081,2.71e-15,203;UBERON:0002405,1.10e-12,93;UBERON:0002371,2.60e-10,76;UBERON:0004535,3.08e-10,109;UBERON:0002204,7.44e-10,167;UBERON:0000926,7.69e-10,315;UBERON:0004120,7.69e-10,315;UBERON:0006603,7.69e-10,315;UBERON:0001009,2.71e-09,112;UBERON:0001474,4.39e-09,82;UBERON:0001434,1.22e-08,100;UBERON:0002049,3.26e-08,78;UBERON:0007798,3.26e-08,78;UBERON:0004765,6.80e-08,90;UBERON:0000055,9.97e-07,68 | |||
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| ||
|short_description=p1@RASA3 | |||
}} | }} |
Latest revision as of 17:35, 16 September 2015
Short description: | p1@RASA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RASA3_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000334062, ENST00000542651, NM_007368, uc001vui.2, uc001vuj.2, uc010tkl.1_5end |
EntrezGene: | RASA3 |
HGNC: | 20331 |
UniProt: | Q14644B7Z3G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.50e-20 | 371 |
hemolymphoid system | 9.38e-17 | 108 |
hematopoietic system | 1.84e-15 | 98 |
blood island | 1.84e-15 | 98 |
lateral plate mesoderm | 2.71e-15 | 203 |
immune system | 1.10e-12 | 93 |
bone marrow | 2.60e-10 | 76 |
cardiovascular system | 3.08e-10 | 109 |
musculoskeletal system | 7.44e-10 | 167 |
mesoderm | 7.69e-10 | 315 |
mesoderm-derived structure | 7.69e-10 | 315 |
presumptive mesoderm | 7.69e-10 | 315 |
circulatory system | 2.71e-09 | 112 |
bone element | 4.39e-09 | 82 |
skeletal system | 1.22e-08 | 100 |
vasculature | 3.26e-08 | 78 |
vascular system | 3.26e-08 | 78 |
skeletal element | 6.80e-08 | 90 |
vessel | 9.97e-07 | 68 |