FFCP PHASE1:Hg19::chr13:99960159..99960170,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:99960159..99960170,+
|short_description=p18@UBAC2
|description=CAGE_peak_18_at_UBAC2_5end
|association_with_transcript=-35bp_to_ENST00000473194_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=337867 | |EntrezGene=337867 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20486 | |HGNC=20486 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_ENST00000473194_5end | |||
|cluster_id=chr13:99960159..99960170,+ | |||
|description=CAGE_peak_18_at_UBAC2_5end | |||
|id=chr13:99960159..99960170,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.18e-53!42;CL:0000860!6.06e-49!45;CL:0000557!2.23e-41!71;CL:0000738!7.43e-40!140;CL:0002009!7.60e-40!65;CL:0000839!5.02e-36!70;CL:0000766!3.07e-35!76;CL:0000988!3.49e-35!182;CL:0002194!4.65e-35!63;CL:0000576!4.65e-35!63;CL:0000040!4.65e-35!63;CL:0000559!4.65e-35!63;CL:0002031!8.88e-35!124;CL:0000037!2.47e-32!172;CL:0000566!2.47e-32!172;CL:0002087!3.45e-32!119;CL:0000763!2.22e-31!112;CL:0000049!2.22e-31!112;CL:0002032!1.38e-30!165;CL:0000837!1.38e-30!165;CL:0000080!1.61e-14!6;CL:0000453!8.16e-13!5;CL:0000134!5.06e-11!358;CL:0002320!1.30e-10!365;CL:0000990!2.11e-10!8;CL:0000219!3.58e-09!390;CL:0001014!5.42e-09!2;CL:0001016!5.42e-09!2;CL:0000451!1.93e-08!10;CL:0000048!1.85e-07!430;CL:0000723!3.22e-07!436;CL:0000034!6.61e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0001014;1.22e-44;2!CL:0001016;1.22e-44;2!CL:0000453;5.31e-40;5!CL:0000990;1.30e-22;8!CL:0000451;1.21e-18;10!CL:0000840;1.22e-15;5!CL:0000860;2.58e-15;33!CL:0002057;2.58e-15;33!CL:0000473;2.98e-11;39!CL:0000234;2.98e-11;39!CL:0000576;8.33e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,7.83e-45,2;CL:0001016,7.83e-45,2;CL:0000453,5.69e-40,5;CL:0000990,1.35e-22,8;CL:0000451,1.24e-18,10;CL:0002009,2.82e-17,61;CL:0000557,9.53e-16,67;CL:0000840,1.05e-15,5;CL:0001029,1.05e-15,5;CL:0000860,2.77e-13,42;CL:0002057,2.77e-13,42;CL:0000763,1.03e-12,108;CL:0000049,1.03e-12,108;CL:0000473,1.20e-11,48;CL:0000234,1.20e-11,48;CL:0000738,4.57e-10,136;CL:0002194,2.38e-09,59;CL:0000576,2.38e-09,59;CL:0000040,2.38e-09,59;CL:0000559,2.38e-09,59;CL:0002031,8.71e-09,120;CL:0002032,1.82e-08,161;CL:0000837,1.82e-08,161;CL:0000839,2.19e-08,66;CL:0000037,4.20e-08,168;CL:0000766,1.05e-07,72;CL:0000988,1.12e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.38e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.62e-45!102;UBERON:0003061!8.62e-45!102;UBERON:0002193!5.57e-40!112;UBERON:0002371!6.91e-36!80;UBERON:0001474!7.36e-33!86;UBERON:0004765!7.43e-27!101;UBERON:0001434!7.43e-27!101;UBERON:0002405!2.77e-26!115;UBERON:0003081!2.76e-16!216;UBERON:0002204!2.92e-13!167;UBERON:0002384!4.70e-10!375;UBERON:0000178!5.94e-08!15;UBERON:0000179!5.94e-08!15;UBERON:0000463!5.94e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.31e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,7.88e-15,93;UBERON:0002390,4.51e-14,98;UBERON:0003061,4.51e-14,98;UBERON:0002371,6.75e-14,76;UBERON:0001474,6.94e-13,82;UBERON:0002193,9.19e-13,108;UBERON:0004765,9.66e-12,90;UBERON:0001434,1.45e-10,100;UBERON:0002106,8.31e-09,3;UBERON:0004854,8.31e-09,3;UBERON:0009034,8.31e-09,3;UBERON:0002095,8.31e-09,3;UBERON:0004782,8.31e-09,3;UBERON:0003281,8.31e-09,3;UBERON:0009664,8.31e-09,3;UBERON:0002296,8.31e-09,3;UBERON:0005602,8.31e-09,3;UBERON:0001179,8.31e-09,3;UBERON:0006293,8.31e-09,3 | |||
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| ||
|short_description=p18@UBAC2 | |||
}} | }} |
Latest revision as of 08:38, 18 September 2015
Short description: | p18@UBAC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_UBAC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_ENST00000473194_5end |
EntrezGene: | UBAC2 |
HGNC: | 20486 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 7.83e-45 | 2 |
immature CD1a-positive Langerhans cell | 7.83e-45 | 2 |
Langerhans cell | 5.69e-40 | 5 |
conventional dendritic cell | 1.35e-22 | 8 |
dendritic cell | 1.24e-18 | 10 |
macrophage dendritic cell progenitor | 2.82e-17 | 61 |
granulocyte monocyte progenitor cell | 9.53e-16 | 67 |
immature conventional dendritic cell | 1.05e-15 | 5 |
common dendritic progenitor | 1.05e-15 | 5 |
classical monocyte | 2.77e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.77e-13 | 42 |
myeloid cell | 1.03e-12 | 108 |
common myeloid progenitor | 1.03e-12 | 108 |
defensive cell | 1.20e-11 | 48 |
phagocyte | 1.20e-11 | 48 |
leukocyte | 4.57e-10 | 136 |
monopoietic cell | 2.38e-09 | 59 |
monocyte | 2.38e-09 | 59 |
monoblast | 2.38e-09 | 59 |
promonocyte | 2.38e-09 | 59 |
hematopoietic lineage restricted progenitor cell | 8.71e-09 | 120 |
hematopoietic oligopotent progenitor cell | 1.82e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.82e-08 | 161 |
myeloid lineage restricted progenitor cell | 2.19e-08 | 66 |
hematopoietic stem cell | 4.20e-08 | 168 |
myeloid leukocyte | 1.05e-07 | 72 |
hematopoietic cell | 1.12e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
immune system | 7.88e-15 | 93 |
hematopoietic system | 4.51e-14 | 98 |
blood island | 4.51e-14 | 98 |
bone marrow | 6.75e-14 | 76 |
bone element | 6.94e-13 | 82 |
hemolymphoid system | 9.19e-13 | 108 |
skeletal element | 9.66e-12 | 90 |
skeletal system | 1.45e-10 | 100 |
spleen | 8.31e-09 | 3 |
gastrointestinal system mesentery | 8.31e-09 | 3 |
stomach region | 8.31e-09 | 3 |
mesentery | 8.31e-09 | 3 |
gastrointestinal system serosa | 8.31e-09 | 3 |
mesentery of stomach | 8.31e-09 | 3 |
gut mesentery | 8.31e-09 | 3 |
dorsal mesentery | 8.31e-09 | 3 |
dorsal mesogastrium | 8.31e-09 | 3 |
peritoneal cavity | 8.31e-09 | 3 |
spleen primordium | 8.31e-09 | 3 |