FFCP PHASE1:Hg19::chr14:102394430..102394452,+: Difference between revisions
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|id=chr14:102394430..102394452,+
|short_description=p@chr14:102394430..102394452,+
|description=CAGE_peak_at_chr14:102394430..102394452,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:102394430..102394452,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr14:102394430..102394452,+ | |||
|id=chr14:102394430..102394452,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.55e-22!42;CL:0000557!1.12e-20!71;CL:0000860!1.76e-20!45;CL:0000839!3.69e-19!70;CL:0000766!9.37e-19!76;CL:0002009!1.99e-15!65;CL:0002194!2.29e-14!63;CL:0000576!2.29e-14!63;CL:0000040!2.29e-14!63;CL:0000559!2.29e-14!63;CL:0000763!3.77e-14!112;CL:0000049!3.77e-14!112;CL:0002274!1.17e-10!5;CL:0000457!1.17e-10!5;CL:0002191!1.17e-10!5;CL:0000097!1.17e-10!5;CL:0000831!1.17e-10!5;CL:0002028!1.17e-10!5;CL:0002031!4.43e-10!124;CL:0000738!6.55e-10!140;CL:0000988!5.82e-09!182;CL:0002032!3.66e-08!165;CL:0000837!3.66e-08!165;CL:0000037!1.48e-07!172;CL:0000566!1.48e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.68e-27;33!CL:0002057;5.68e-27;33!CL:0000097;1.30e-23;5!CL:0000473;8.19e-21;39!CL:0000234;8.19e-21;39!CL:0000576;5.99e-17;48!CL:0000766;2.84e-14;69!CL:0000228;1.25e-13;1!CL:0002372;1.25e-13;1!CL:0000163;2.09e-13;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,9.59e-30,66;CL:0000557,2.76e-29,67;CL:0000860,3.88e-28,42;CL:0002057,3.88e-28,42;CL:0000766,3.52e-27,72;CL:0000473,1.73e-24,48;CL:0000234,1.73e-24,48;CL:0000097,1.20e-23,5;CL:0002028,1.20e-23,5;CL:0002194,2.27e-19,59;CL:0000576,2.27e-19,59;CL:0000040,2.27e-19,59;CL:0000559,2.27e-19,59;CL:0002009,1.04e-18,61;CL:0000763,1.06e-17,108;CL:0000049,1.06e-17,108;CL:0002031,8.68e-16,120;CL:0000738,9.35e-14,136;CL:0000228,9.73e-14,1;CL:0002372,9.73e-14,1;CL:0000163,2.00e-13,9;CL:0000988,4.88e-12,177;CL:0002032,2.23e-11,161;CL:0000837,2.23e-11,161;CL:0000037,7.76e-11,168;CL:0002087,1.92e-09,115 | |||
|ontology_enrichment_development_v019=CL:0002057;3.41e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.70e-19!80;UBERON:0002390!9.04e-18!102;UBERON:0003061!9.04e-18!102;UBERON:0001474!1.79e-17!86;UBERON:0002193!1.65e-15!112;UBERON:0004765!3.84e-15!101;UBERON:0001434!3.84e-15!101;UBERON:0002405!2.20e-11!115;UBERON:0002204!8.51e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.08e-25,76;UBERON:0001474,1.00e-23,82;UBERON:0002390,5.50e-23,98;UBERON:0003061,5.50e-23,98;UBERON:0004765,1.66e-21,90;UBERON:0002405,9.00e-21,93;UBERON:0002193,9.91e-21,108;UBERON:0001434,3.17e-19,100;UBERON:0002204,7.85e-13,167;UBERON:0003081,2.82e-10,203;UBERON:0000926,4.55e-07,315;UBERON:0004120,4.55e-07,315;UBERON:0006603,4.55e-07,315 | |||
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| ||
|short_description=p@chr14:102394430..102394452,+ | |||
}} | }} |
Latest revision as of 18:07, 24 July 2015
Short description: | p@chr14:102394430..102394452, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:102394430..102394452, + |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 9.59e-30 | 66 |
granulocyte monocyte progenitor cell | 2.76e-29 | 67 |
classical monocyte | 3.88e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.88e-28 | 42 |
myeloid leukocyte | 3.52e-27 | 72 |
defensive cell | 1.73e-24 | 48 |
phagocyte | 1.73e-24 | 48 |
mast cell | 1.20e-23 | 5 |
basophil mast progenitor cell | 1.20e-23 | 5 |
monopoietic cell | 2.27e-19 | 59 |
monocyte | 2.27e-19 | 59 |
monoblast | 2.27e-19 | 59 |
promonocyte | 2.27e-19 | 59 |
macrophage dendritic cell progenitor | 1.04e-18 | 61 |
myeloid cell | 1.06e-17 | 108 |
common myeloid progenitor | 1.06e-17 | 108 |
hematopoietic lineage restricted progenitor cell | 8.68e-16 | 120 |
leukocyte | 9.35e-14 | 136 |
multinucleate cell | 9.73e-14 | 1 |
myotube | 9.73e-14 | 1 |
endocrine cell | 2.00e-13 | 9 |
hematopoietic cell | 4.88e-12 | 177 |
hematopoietic oligopotent progenitor cell | 2.23e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.23e-11 | 161 |
hematopoietic stem cell | 7.76e-11 | 168 |
nongranular leukocyte | 1.92e-09 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.08e-25 | 76 |
bone element | 1.00e-23 | 82 |
hematopoietic system | 5.50e-23 | 98 |
blood island | 5.50e-23 | 98 |
skeletal element | 1.66e-21 | 90 |
immune system | 9.00e-21 | 93 |
hemolymphoid system | 9.91e-21 | 108 |
skeletal system | 3.17e-19 | 100 |
musculoskeletal system | 7.85e-13 | 167 |
lateral plate mesoderm | 2.82e-10 | 203 |
mesoderm | 4.55e-07 | 315 |
mesoderm-derived structure | 4.55e-07 | 315 |
presumptive mesoderm | 4.55e-07 | 315 |