FFCP PHASE1:Hg19::chr2:29237279..29237297,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=165186 | |EntrezGene=165186 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33715 | |HGNC=33715 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_uc002rmr.3_5end | |association_with_transcript=18bp_to_uc002rmr.3_5end | ||
|cluster_id=chr2:29237279..29237297,+ | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_1_at_FAM179A_5end | |description=CAGE_peak_1_at_FAM179A_5end | ||
|id=chr2:29237279..29237297,+ | |id=chr2:29237279..29237297,+ | ||
|ontology_enrichment_celltype=CL:0000084!4.60e-23!25;CL:0000827!4.60e-23!25;CL:0000791!5.16e-23!18;CL:0000789!5.16e-23!18;CL:0002420!5.16e-23!18;CL:0002419!5.16e-23!18;CL:0000790!5.16e-23!18;CL:0000625!9.43e-18!11;CL:0000738!4.61e-14!140;CL:0000037!2.66e-13!172;CL:0000566!2.66e-13!172;CL:0000988!1.05e-11!182;CL:0002032!1.61e-11!165;CL:0000837!1.61e-11!165;CL:0000838!3.08e-11!52;CL:0002087!4.45e-11!119;CL:0000542!6.87e-11!53;CL:0000051!6.87e-11!53;CL:0002031!1.45e-08!124;CL:0000094!5.55e-07!8 | |ontology_enrichment_celltype=CL:0000084!4.60e-23!25;CL:0000827!4.60e-23!25;CL:0000791!5.16e-23!18;CL:0000789!5.16e-23!18;CL:0002420!5.16e-23!18;CL:0002419!5.16e-23!18;CL:0000790!5.16e-23!18;CL:0000625!9.43e-18!11;CL:0000738!4.61e-14!140;CL:0000037!2.66e-13!172;CL:0000566!2.66e-13!172;CL:0000988!1.05e-11!182;CL:0002032!1.61e-11!165;CL:0000837!1.61e-11!165;CL:0000838!3.08e-11!52;CL:0002087!4.45e-11!119;CL:0000542!6.87e-11!53;CL:0000051!6.87e-11!53;CL:0002031!1.45e-08!124;CL:0000094!5.55e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000625;5.98e-35;11!CL:0000791;6.41e-33;18!CL:0000789;6.41e-33;18!CL:0002419;6.41e-33;18!CL:0000084;3.54e-26;25!CL:0000623;1.44e-11;3!CL:0000226;5.57e-10;3!CL:0000842;5.57e-10;3!CL:0000542;4.48e-09;53!CL:0000771;1.33e-07;2!CL:0000094;8.18e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,6.34e-35,11;CL:0000791,8.71e-33,18;CL:0000789,8.71e-33,18;CL:0002420,8.71e-33,18;CL:0002419,8.71e-33,18;CL:0000790,8.71e-33,18;CL:0000084,5.18e-26,25;CL:0000827,5.18e-26,25;CL:0000838,3.36e-16,52;CL:0000542,8.31e-16,53;CL:0000051,8.31e-16,53;CL:0000738,1.40e-12,136;CL:0000623,1.44e-11,3;CL:0000825,1.44e-11,3;CL:0002087,4.30e-11,115;CL:0000037,1.42e-10,168;CL:0000226,4.41e-10,3;CL:0000842,4.41e-10,3;CL:0000988,1.15e-09,177;CL:0002032,1.16e-08,161;CL:0000837,1.16e-08,161;CL:0000771,1.02e-07,2;CL:0002031,1.53e-07,120;CL:0000893,2.16e-07,2;CL:0002489,2.16e-07,2;CL:0000809,2.16e-07,2;CL:0000808,2.16e-07,2;CL:0000894,2.16e-07,2;CL:0000806,2.16e-07,2;CL:0000807,2.16e-07,2;CL:0000805,2.16e-07,2;CL:0002425,2.16e-07,2;CL:0000094,6.25e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;6.41e-33;18!CL:0000051;4.48e-09;53!CL:0002425;1.78e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;9.07e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.09e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-19!115;UBERON:0000178!1.46e-13!15;UBERON:0000179!1.46e-13!15;UBERON:0000463!1.46e-13!15;UBERON:0002390!4.51e-07!102;UBERON:0003061!4.51e-07!102;UBERON:0002193!7.39e-07!112 | |ontology_enrichment_uberon=UBERON:0007023!1.22e-19!115;UBERON:0000178!1.46e-13!15;UBERON:0000179!1.46e-13!15;UBERON:0000463!1.46e-13!15;UBERON:0002390!4.51e-07!102;UBERON:0003061!4.51e-07!102;UBERON:0002193!7.39e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.55e-27;15!UBERON:0000179;1.55e-27;15!UBERON:0000463;1.55e-27;15!UBERON:0002390;3.75e-13;32!UBERON:0002193;8.38e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.40e-27,15;UBERON:0000179,1.40e-27,15;UBERON:0000463,1.40e-27,15;UBERON:0007023,5.57e-09,114;UBERON:0002390,9.02e-07,98;UBERON:0003061,9.02e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,4.98978217526377,0.928896739896456,0,0,0,0,0,0,1.66198622559563,1.80490002723128,3.47217393145363,0,0.32389366601898,0.257575567634187,0,0,0,0.464858073811369,0,0,0,0,0,0.689491361473237,0.645484683583826,0,0,0.545812300115692,0,0,0,0,0,0.398927315243264,0.426224750532694,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0.561643155732475,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80254281490768,0,0.393419540227666,0.393010762749165,0.616804496998528,1.00311897234407,0,0,0,1.22551502573691,1.17842362989935,0.221533894583621,0.812411591295047,1.92136979588513,0.520237390239513,1.15106533222573,2.76350017785848,2.31842468588042,0.14828656316206,0,0,3.62589896632212,1.14966148080576,0.68725489096526,0.506039384039006,3.82278497188916,3.90650072313851,4.75226022224187,1.50575119077773,3.07167866770604,6.24653632761729,4.97232229292435,4.92676798152628,2.01606743224732,2.67440195783507,3.18613688542158,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94051263165695,7.29013812747131,6.03757209606648,10.1390998661001,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,2.37285620900479,2.56146138728266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,2.02979043692868,2.29391162142713,2.84823593587081,2.38231775457789,1.23408681925858,1.29694662238543,4.86028293514303,1.58625035258854,0,0.962479855263359,0,0,0,0,0.159426272728822,0.399158742865633,0.191505370132367,2.54008299268659,0,0.280797178113459,0.912938716132769,0,0,1.01575066680962,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0.262887354279314,7.26134243307861,0.916641696046735,0.717873024576814,2.59582700648688,5.57993862577542,3.79391477651183,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,3.57347663186684,1.98627591109629,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.320362237703084,0.314408610199332,2.07119527673598,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.225630985047772,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0.691259661814092,0.430227358820278,0,0,0,0,0,0,0,0,0,93.2297525550568,2.15591894398119,0,0.485710993059139,0,0,0,0,0,0,0.540219106755613,0.874238242015829,0,0,0,0,0,0,0,0.845855261818682,2.51385763096951,0,0,0,0,0,1.37618785021362,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,4.05144565611864,0,0,0.124149428591716,0,0.509177266225319,0.404234377916439,2.17716747896961,1.36893320434112,0.606168477131288,0.143444410785353,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,4.98978217526377,0.928896739896456,0,0,0,0,0,0,1.66198622559563,1.80490002723128,3.47217393145363,0,0.32389366601898,0.257575567634187,0,0,0,0.464858073811369,0,0,0,0,0,0.689491361473237,0.645484683583826,0,0,0.545812300115692,0,0,0,0,0,0.398927315243264,0.426224750532694,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0.561643155732475,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80254281490768,0,0.393419540227666,0.393010762749165,0.616804496998528,1.00311897234407,0,0,0,1.22551502573691,1.17842362989935,0.221533894583621,0.812411591295047,1.92136979588513,0.520237390239513,1.15106533222573,2.76350017785848,2.31842468588042,0.14828656316206,0,0,3.62589896632212,1.14966148080576,0.68725489096526,0.506039384039006,3.82278497188916,3.90650072313851,4.75226022224187,1.50575119077773,3.07167866770604,6.24653632761729,4.97232229292435,4.92676798152628,2.01606743224732,2.67440195783507,3.18613688542158,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94051263165695,7.29013812747131,6.03757209606648,10.1390998661001,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,2.37285620900479,2.56146138728266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.470719003883896,0,0,0,0,2.02979043692868,2.29391162142713,2.84823593587081,2.38231775457789,1.23408681925858,1.29694662238543,4.86028293514303,1.58625035258854,0,0.962479855263359,0,0,0,0,0.159426272728822,0.399158742865633,0.191505370132367,2.54008299268659,0,0.280797178113459,0.912938716132769,0,0,1.01575066680962,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0.262887354279314,7.26134243307861,0.916641696046735,0.717873024576814,2.59582700648688,5.57993862577542,3.79391477651183,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,3.57347663186684,1.98627591109629,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.320362237703084,0.314408610199332,2.07119527673598,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.225630985047772,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0.691259661814092,0.430227358820278,0,0,0,0,0,0,0,0,0,93.2297525550568,2.15591894398119,0,0.485710993059139,0,0,0,0,0,0,0.540219106755613,0.874238242015829,0,0,0,0,0,0,0,0.845855261818682,2.51385763096951,0,0,0,0,0,1.37618785021362,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,4.05144565611864,0,0,0.124149428591716,0,0.509177266225319,0.404234377916439,2.17716747896961,1.36893320434112,0.606168477131288,0.143444410785353,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,0 | ||
|short_description=p1@FAM179A | |short_description=p1@FAM179A | ||
}} | }} |
Latest revision as of 20:22, 16 September 2015
Short description: | p1@FAM179A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM179A_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 18bp_to_uc002rmr.3_5end |
EntrezGene: | FAM179A |
HGNC: | 33715 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.40e-27 | 15 |
haemolymphatic fluid | 1.40e-27 | 15 |
organism substance | 1.40e-27 | 15 |
adult organism | 5.57e-09 | 114 |
hematopoietic system | 9.02e-07 | 98 |
blood island | 9.02e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.09e-08 | 2 |