FFCP PHASE1:Hg19::chr2:85198231..85198305,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56888 | |EntrezGene=56888 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20589 | |HGNC=20589 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P0J7 | |UniProt=Q9P0J7 | ||
|association_with_transcript=0bp_to_NM_020122,uc002sox.3_5end | |association_with_transcript=0bp_to_NM_020122,uc002sox.3_5end | ||
|cluster_id=chr2:85198231..85198305,+ | |||
|description=CAGE_peak_1_at_KCMF1_5end | |description=CAGE_peak_1_at_KCMF1_5end | ||
|id=chr2:85198231..85198305,+ | |id=chr2:85198231..85198305,+ | ||
|ontology_enrichment_celltype=CL:0000738!7.67e-18!140;CL:0002057!1.46e-17!42;CL:0000860!1.99e-16!45;CL:0002031!1.72e-13!124;CL:0002087!2.28e-13!119;CL:0000037!7.94e-13!172;CL:0000566!7.94e-13!172;CL:0002032!9.71e-12!165;CL:0000837!9.71e-12!165;CL:0000766!9.68e-11!76;CL:0000988!1.31e-10!182;CL:0000557!2.49e-09!71;CL:0002009!5.05e-08!65;CL:0000839!1.09e-07!70;CL:0002194!1.64e-07!63;CL:0000576!1.64e-07!63;CL:0000040!1.64e-07!63;CL:0000559!1.64e-07!63;CL:0000063!4.83e-07!578;CL:0000763!9.82e-07!112;CL:0000049!9.82e-07!112 | |ontology_enrichment_celltype=CL:0000738!7.67e-18!140;CL:0002057!1.46e-17!42;CL:0000860!1.99e-16!45;CL:0002031!1.72e-13!124;CL:0002087!2.28e-13!119;CL:0000037!7.94e-13!172;CL:0000566!7.94e-13!172;CL:0002032!9.71e-12!165;CL:0000837!9.71e-12!165;CL:0000766!9.68e-11!76;CL:0000988!1.31e-10!182;CL:0000557!2.49e-09!71;CL:0002009!5.05e-08!65;CL:0000839!1.09e-07!70;CL:0002194!1.64e-07!63;CL:0000576!1.64e-07!63;CL:0000040!1.64e-07!63;CL:0000559!1.64e-07!63;CL:0000063!4.83e-07!578;CL:0000763!9.82e-07!112;CL:0000049!9.82e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.55e-15;33!CL:0002057;9.55e-15;33!CL:0000576;2.83e-09;48!CL:0000473;1.61e-08;39!CL:0000234;1.61e-08;39!CL:0000766;6.94e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.08e-18,136;CL:0000860,1.46e-17,42;CL:0002057,1.46e-17,42;CL:0002031,3.04e-14,120;CL:0002087,3.86e-14,115;CL:0000037,2.18e-13,168;CL:0000473,9.10e-13,48;CL:0000234,9.10e-13,48;CL:0002032,2.79e-12,161;CL:0000837,2.79e-12,161;CL:0000766,1.15e-11,72;CL:0000988,4.93e-11,177;CL:0000557,3.40e-10,67;CL:0002009,7.75e-09,61;CL:0000839,1.98e-08,66;CL:0002194,2.66e-08,59;CL:0000576,2.66e-08,59;CL:0000040,2.66e-08,59;CL:0000559,2.66e-08,59;CL:0000763,3.39e-07,108;CL:0000049,3.39e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;5.70e-13;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.31e-10!112;UBERON:0002390!1.84e-10!102;UBERON:0003061!1.84e-10!102;UBERON:0001474!1.36e-08!86;UBERON:0002371!1.13e-07!80 | |ontology_enrichment_uberon=UBERON:0002193!1.31e-10!112;UBERON:0002390!1.84e-10!102;UBERON:0003061!1.84e-10!102;UBERON:0001474!1.36e-08!86;UBERON:0002371!1.13e-07!80 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.79e-11,108;UBERON:0002390,3.56e-11,98;UBERON:0003061,3.56e-11,98;UBERON:0001474,2.78e-09,82;UBERON:0002405,5.27e-09,93;UBERON:0002371,2.45e-08,76;UBERON:0004765,2.07e-07,90 | |||
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| ||
|short_description=p1@KCMF1 | |short_description=p1@KCMF1 | ||
}} | }} |
Latest revision as of 15:39, 18 September 2015
Short description: | p1@KCMF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCMF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_020122, uc002sox.3_5end |
EntrezGene: | KCMF1 |
HGNC: | 20589 |
UniProt: | Q9P0J7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.08e-18 | 136 |
classical monocyte | 1.46e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.46e-17 | 42 |
hematopoietic lineage restricted progenitor cell | 3.04e-14 | 120 |
nongranular leukocyte | 3.86e-14 | 115 |
hematopoietic stem cell | 2.18e-13 | 168 |
defensive cell | 9.10e-13 | 48 |
phagocyte | 9.10e-13 | 48 |
hematopoietic oligopotent progenitor cell | 2.79e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.79e-12 | 161 |
myeloid leukocyte | 1.15e-11 | 72 |
hematopoietic cell | 4.93e-11 | 177 |
granulocyte monocyte progenitor cell | 3.40e-10 | 67 |
macrophage dendritic cell progenitor | 7.75e-09 | 61 |
myeloid lineage restricted progenitor cell | 1.98e-08 | 66 |
monopoietic cell | 2.66e-08 | 59 |
monocyte | 2.66e-08 | 59 |
monoblast | 2.66e-08 | 59 |
promonocyte | 2.66e-08 | 59 |
myeloid cell | 3.39e-07 | 108 |
common myeloid progenitor | 3.39e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.79e-11 | 108 |
hematopoietic system | 3.56e-11 | 98 |
blood island | 3.56e-11 | 98 |
bone element | 2.78e-09 | 82 |
immune system | 5.27e-09 | 93 |
bone marrow | 2.45e-08 | 76 |
skeletal element | 2.07e-07 | 90 |