FFCP PHASE1:Hg19::chr3:135914615..135914701,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55167 | |EntrezGene=55167 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25544 | |HGNC=25544 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCI7 | |UniProt=Q9HCI7 | ||
|association_with_transcript=0bp_to_ENST00000309993,NM_018133,uc003eqx.1_5end | |association_with_transcript=0bp_to_ENST00000309993,NM_018133,uc003eqx.1_5end | ||
|cluster_id=chr3:135914615..135914701,- | |||
|coexpression_cluster_id=C123 | |||
|description=CAGE_peak_3_at_MSL2_5end | |description=CAGE_peak_3_at_MSL2_5end | ||
|id=chr3:135914615..135914701,- | |id=chr3:135914615..135914701,- | ||
|ontology_enrichment_celltype=CL:0000738!2.12e-45!140;CL:0000037!4.70e-45!172;CL:0000566!4.70e-45!172;CL:0000988!1.51e-42!182;CL:0002032!1.62e-40!165;CL:0000837!1.62e-40!165;CL:0002087!7.22e-37!119;CL:0002031!5.13e-36!124;CL:0000542!3.17e-21!53;CL:0000051!3.17e-21!53;CL:0000838!4.30e-21!52;CL:0000766!8.69e-21!76;CL:0000763!4.01e-19!112;CL:0000049!4.01e-19!112;CL:0000557!1.94e-17!71;CL:0000839!6.17e-15!70;CL:0002009!2.18e-14!65;CL:0002057!3.01e-14!42;CL:0002194!4.31e-14!63;CL:0000576!4.31e-14!63;CL:0000040!4.31e-14!63;CL:0000559!4.31e-14!63;CL:0000860!5.87e-14!45;CL:0000084!2.39e-11!25;CL:0000827!2.39e-11!25;CL:0000791!2.53e-09!18;CL:0000789!2.53e-09!18;CL:0002420!2.53e-09!18;CL:0002419!2.53e-09!18;CL:0000790!2.53e-09!18;CL:0000945!3.80e-09!24;CL:0000826!3.80e-09!24;CL:0000236!7.68e-07!14 | |ontology_enrichment_celltype=CL:0000738!2.12e-45!140;CL:0000037!4.70e-45!172;CL:0000566!4.70e-45!172;CL:0000988!1.51e-42!182;CL:0002032!1.62e-40!165;CL:0000837!1.62e-40!165;CL:0002087!7.22e-37!119;CL:0002031!5.13e-36!124;CL:0000542!3.17e-21!53;CL:0000051!3.17e-21!53;CL:0000838!4.30e-21!52;CL:0000766!8.69e-21!76;CL:0000763!4.01e-19!112;CL:0000049!4.01e-19!112;CL:0000557!1.94e-17!71;CL:0000839!6.17e-15!70;CL:0002009!2.18e-14!65;CL:0002057!3.01e-14!42;CL:0002194!4.31e-14!63;CL:0000576!4.31e-14!63;CL:0000040!4.31e-14!63;CL:0000559!4.31e-14!63;CL:0000860!5.87e-14!45;CL:0000084!2.39e-11!25;CL:0000827!2.39e-11!25;CL:0000791!2.53e-09!18;CL:0000789!2.53e-09!18;CL:0002420!2.53e-09!18;CL:0002419!2.53e-09!18;CL:0000790!2.53e-09!18;CL:0000945!3.80e-09!24;CL:0000826!3.80e-09!24;CL:0000236!7.68e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000542;6.31e-13;53!CL:0002087;1.94e-11;104!CL:0000084;2.64e-11;25!CL:0000766;2.44e-10;69!CL:0000738;4.72e-10;136!CL:0000576;6.66e-10;48!CL:0000945;2.32e-09;24!CL:0000791;2.45e-09;18!CL:0000789;2.45e-09;18!CL:0002419;2.45e-09;18!CL:0000860;2.94e-09;33!CL:0002057;2.94e-09;33!CL:0000988;3.55e-08;177!CL:0000473;3.94e-08;39!CL:0000234;3.94e-08;39!CL:0000763;1.57e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.32e-49,168;CL:0000738,2.32e-48,136;CL:0000988,2.07e-46,177;CL:0002032,4.72e-44,161;CL:0000837,4.72e-44,161;CL:0002087,1.58e-39,115;CL:0002031,6.21e-39,120;CL:0000766,1.07e-22,72;CL:0000542,5.06e-22,53;CL:0000051,5.06e-22,53;CL:0000838,6.95e-22,52;CL:0000763,2.40e-21,108;CL:0000049,2.40e-21,108;CL:0000557,4.27e-19,67;CL:0000839,1.16e-16,66;CL:0002009,8.06e-16,61;CL:0002194,1.60e-15,59;CL:0000576,1.60e-15,59;CL:0000040,1.60e-15,59;CL:0000559,1.60e-15,59;CL:0000860,9.25e-15,42;CL:0002057,9.25e-15,42;CL:0000473,1.10e-14,48;CL:0000234,1.10e-14,48;CL:0000084,9.63e-12,25;CL:0000827,9.63e-12,25;CL:0000791,1.23e-09,18;CL:0000789,1.23e-09,18;CL:0002420,1.23e-09,18;CL:0002419,1.23e-09,18;CL:0000790,1.23e-09,18;CL:0000945,1.87e-09,24;CL:0000826,1.87e-09,24;CL:0000236,4.68e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;6.31e-13;53!CL:0002057;1.65e-10;42!CL:0000790;2.45e-09;18 | |||
|ontology_enrichment_disease=DOID:2531!7.50e-07!51;DOID:0060083!7.50e-07!51 | |ontology_enrichment_disease=DOID:2531!7.50e-07!51;DOID:0060083!7.50e-07!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.58e-07,51;DOID:0060083,1.58e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.91e-25!102;UBERON:0003061!1.91e-25!102;UBERON:0002193!4.59e-22!112;UBERON:0002371!1.43e-15!80;UBERON:0001474!2.26e-14!86;UBERON:0002405!4.02e-12!115;UBERON:0004765!4.88e-11!101;UBERON:0001434!4.88e-11!101;UBERON:0000178!6.65e-09!15;UBERON:0000179!6.65e-09!15;UBERON:0000463!6.65e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.29e-09;15!UBERON:0000179;2.29e-09;15!UBERON:0000463;2.29e-09;15!UBERON:0002390;1.84e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.02e-27,98;UBERON:0003061,2.02e-27,98;UBERON:0002193,7.69e-24,108;UBERON:0002371,6.21e-17,76;UBERON:0002405,8.86e-17,93;UBERON:0001474,1.25e-15,82;UBERON:0004765,5.04e-12,90;UBERON:0001434,1.16e-10,100;UBERON:0000178,3.36e-09,15;UBERON:0000179,3.36e-09,15;UBERON:0000463,3.36e-09,15 | |||
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| ||
|short_description=p3@MSL2 | |short_description=p3@MSL2 | ||
}} | }} |
Latest revision as of 23:38, 24 September 2015
Short description: | p3@MSL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MSL2_5end |
Coexpression cluster: | C123_CD19_Natural_CD8_CD4_CD14_Peripheral_Basophils |
Association with transcript: | 0bp_to_ENST00000309993, NM_018133, uc003eqx.1_5end |
EntrezGene: | MSL2 |
HGNC: | 25544 |
UniProt: | Q9HCI7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.02e-27 | 98 |
blood island | 2.02e-27 | 98 |
hemolymphoid system | 7.69e-24 | 108 |
bone marrow | 6.21e-17 | 76 |
immune system | 8.86e-17 | 93 |
bone element | 1.25e-15 | 82 |
skeletal element | 5.04e-12 | 90 |
skeletal system | 1.16e-10 | 100 |
blood | 3.36e-09 | 15 |
haemolymphatic fluid | 3.36e-09 | 15 |
organism substance | 3.36e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.58e-07 | 51 |
immune system cancer | 1.58e-07 | 51 |