FFCP PHASE1:Hg19::chr3:5021113..5021180,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8553 | |EntrezGene=8553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1046 | |HGNC=1046 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000467610_5end | |association_with_transcript=0bp_to_ENST00000467610_5end | ||
|cluster_id=chr3:5021113..5021180,+ | |||
|coexpression_cluster_id=C4335 | |||
|description=CAGE_peak_1_at_BHLHE40_5end | |description=CAGE_peak_1_at_BHLHE40_5end | ||
|id=chr3:5021113..5021180,+ | |id=chr3:5021113..5021180,+ | ||
|ontology_enrichment_celltype=CL:0000766!2.38e-19!76;CL:0002057!5.54e-18!42;CL:0000557!1.80e-16!71;CL:0000860!7.48e-16!45;CL:0000738!4.85e-14!140;CL:0000839!6.44e-14!70;CL:0002009!7.08e-14!65;CL:0002194!8.28e-13!63;CL:0000576!8.28e-13!63;CL:0000040!8.28e-13!63;CL:0000559!8.28e-13!63;CL:0000763!1.32e-10!112;CL:0000049!1.32e-10!112;CL:0002031!2.42e-08!124;CL:0000037!1.75e-07!172;CL:0000566!1.75e-07!172;CL:0000988!1.82e-07!182;CL:0002087!2.81e-07!119 | |ontology_enrichment_celltype=CL:0000766!2.38e-19!76;CL:0002057!5.54e-18!42;CL:0000557!1.80e-16!71;CL:0000860!7.48e-16!45;CL:0000738!4.85e-14!140;CL:0000839!6.44e-14!70;CL:0002009!7.08e-14!65;CL:0002194!8.28e-13!63;CL:0000576!8.28e-13!63;CL:0000040!8.28e-13!63;CL:0000559!8.28e-13!63;CL:0000763!1.32e-10!112;CL:0000049!1.32e-10!112;CL:0002031!2.42e-08!124;CL:0000037!1.75e-07!172;CL:0000566!1.75e-07!172;CL:0000988!1.82e-07!182;CL:0002087!2.81e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.29e-17;33!CL:0002057;8.29e-17;33!CL:0000473;2.55e-15;39!CL:0000234;2.55e-15;39!CL:0000766;4.23e-10;69!CL:0000576;5.96e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.23e-21,72;CL:0000473,1.80e-19,48;CL:0000234,1.80e-19,48;CL:0000860,5.54e-18,42;CL:0002057,5.54e-18,42;CL:0000557,8.96e-18,67;CL:0002009,4.37e-15,61;CL:0000839,4.72e-15,66;CL:0000738,1.12e-14,136;CL:0002194,5.77e-14,59;CL:0000576,5.77e-14,59;CL:0000040,5.77e-14,59;CL:0000559,5.77e-14,59;CL:0000763,3.30e-11,108;CL:0000049,3.30e-11,108;CL:0002031,8.49e-09,120;CL:0000988,6.41e-08,177;CL:0000037,8.28e-08,168;CL:0002087,1.07e-07,115;CL:0002032,5.61e-07,161;CL:0000837,5.61e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.66e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.28e-15!102;UBERON:0003061!8.28e-15!102;UBERON:0002371!3.92e-14!80;UBERON:0002193!1.41e-12!112;UBERON:0001474!1.56e-12!86;UBERON:0002405!4.91e-11!115;UBERON:0003081!5.89e-10!216;UBERON:0004765!2.15e-08!101;UBERON:0001434!2.15e-08!101 | |ontology_enrichment_uberon=UBERON:0002390!8.28e-15!102;UBERON:0003061!8.28e-15!102;UBERON:0002371!3.92e-14!80;UBERON:0002193!1.41e-12!112;UBERON:0001474!1.56e-12!86;UBERON:0002405!4.91e-11!115;UBERON:0003081!5.89e-10!216;UBERON:0004765!2.15e-08!101;UBERON:0001434!2.15e-08!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.13e-15,98;UBERON:0003061,1.13e-15,98;UBERON:0002371,3.71e-15,76;UBERON:0001474,2.12e-13,82;UBERON:0002193,2.84e-13,108;UBERON:0002405,5.60e-12,93;UBERON:0004765,4.00e-11,90;UBERON:0003081,5.66e-09,203;UBERON:0001434,7.77e-08,100 | |||
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| ||
|short_description=p1@BHLHE40 | |short_description=p1@BHLHE40 | ||
}} | }} |
Latest revision as of 18:28, 18 September 2015
Short description: | p1@BHLHE40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BHLHE40_5end |
Coexpression cluster: | C4335_Mast_Basophils_immature_CD14_Eosinophils_serous_CD8 |
Association with transcript: | 0bp_to_ENST00000467610_5end |
EntrezGene: | BHLHE40 |
HGNC: | 1046 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.23e-21 | 72 |
defensive cell | 1.80e-19 | 48 |
phagocyte | 1.80e-19 | 48 |
classical monocyte | 5.54e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.54e-18 | 42 |
granulocyte monocyte progenitor cell | 8.96e-18 | 67 |
macrophage dendritic cell progenitor | 4.37e-15 | 61 |
myeloid lineage restricted progenitor cell | 4.72e-15 | 66 |
leukocyte | 1.12e-14 | 136 |
monopoietic cell | 5.77e-14 | 59 |
monocyte | 5.77e-14 | 59 |
monoblast | 5.77e-14 | 59 |
promonocyte | 5.77e-14 | 59 |
myeloid cell | 3.30e-11 | 108 |
common myeloid progenitor | 3.30e-11 | 108 |
hematopoietic lineage restricted progenitor cell | 8.49e-09 | 120 |
hematopoietic cell | 6.41e-08 | 177 |
hematopoietic stem cell | 8.28e-08 | 168 |
nongranular leukocyte | 1.07e-07 | 115 |
hematopoietic oligopotent progenitor cell | 5.61e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.61e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.13e-15 | 98 |
blood island | 1.13e-15 | 98 |
bone marrow | 3.71e-15 | 76 |
bone element | 2.12e-13 | 82 |
hemolymphoid system | 2.84e-13 | 108 |
immune system | 5.60e-12 | 93 |
skeletal element | 4.00e-11 | 90 |
lateral plate mesoderm | 5.66e-09 | 203 |
skeletal system | 7.77e-08 | 100 |