FFCP PHASE1:Hg19::chr5:70751463..70751503,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55814 | |EntrezGene=55814 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13652 | |HGNC=13652 | ||
|TSSclassifier=strong | |||
|UniProt=C9JGV8 | |UniProt=C9JGV8 | ||
|association_with_transcript=0bp_to_ENST00000444711_5end | |association_with_transcript=0bp_to_ENST00000444711_5end | ||
|cluster_id=chr5:70751463..70751503,+ | |||
|coexpression_cluster_id=C986 | |||
|description=CAGE_peak_1_at_BDP1_5end | |description=CAGE_peak_1_at_BDP1_5end | ||
|id=chr5:70751463..70751503,+ | |id=chr5:70751463..70751503,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.45e-23!172;CL:0000566!1.45e-23!172;CL:0000738!1.40e-22!140;CL:0002032!2.85e-21!165;CL:0000837!2.85e-21!165;CL:0000988!4.02e-21!182;CL:0002031!1.32e-20!124;CL:0002087!1.26e-19!119;CL:0000542!5.54e-13!53;CL:0000051!5.54e-13!53;CL:0000838!8.60e-13!52;CL:0000557!1.03e-09!71;CL:0000763!1.49e-09!112;CL:0000049!1.49e-09!112;CL:0000860!2.24e-08!45;CL:0000766!3.02e-08!76;CL:0000839!3.63e-08!70;CL:0000791!1.45e-07!18;CL:0000789!1.45e-07!18;CL:0002420!1.45e-07!18;CL:0002419!1.45e-07!18;CL:0000790!1.45e-07!18;CL:0002009!1.93e-07!65;CL:0002057!2.56e-07!42;CL:0002194!8.54e-07!63;CL:0000576!8.54e-07!63;CL:0000040!8.54e-07!63;CL:0000559!8.54e-07!63 | |ontology_enrichment_celltype=CL:0000037!1.45e-23!172;CL:0000566!1.45e-23!172;CL:0000738!1.40e-22!140;CL:0002032!2.85e-21!165;CL:0000837!2.85e-21!165;CL:0000988!4.02e-21!182;CL:0002031!1.32e-20!124;CL:0002087!1.26e-19!119;CL:0000542!5.54e-13!53;CL:0000051!5.54e-13!53;CL:0000838!8.60e-13!52;CL:0000557!1.03e-09!71;CL:0000763!1.49e-09!112;CL:0000049!1.49e-09!112;CL:0000860!2.24e-08!45;CL:0000766!3.02e-08!76;CL:0000839!3.63e-08!70;CL:0000791!1.45e-07!18;CL:0000789!1.45e-07!18;CL:0002420!1.45e-07!18;CL:0002419!1.45e-07!18;CL:0000790!1.45e-07!18;CL:0002009!1.93e-07!65;CL:0002057!2.56e-07!42;CL:0002194!8.54e-07!63;CL:0000576!8.54e-07!63;CL:0000040!8.54e-07!63;CL:0000559!8.54e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000542;6.77e-08;53!CL:0000791;1.72e-07;18!CL:0000789;1.72e-07;18!CL:0002419;1.72e-07;18!CL:0000860;3.88e-07;33!CL:0002057;3.88e-07;33!CL:0002087;4.50e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.06e-22,168;CL:0000738,9.78e-22,136;CL:0000988,6.96e-21,177;CL:0002032,1.96e-20,161;CL:0000837,1.96e-20,161;CL:0002031,8.73e-20,120;CL:0002087,8.11e-19,115;CL:0000542,5.54e-13,53;CL:0000051,5.54e-13,53;CL:0000838,8.60e-13,52;CL:0000557,5.19e-09,67;CL:0000763,6.78e-09,108;CL:0000049,6.78e-09,108;CL:0000766,1.40e-07,72;CL:0000791,1.45e-07,18;CL:0000789,1.45e-07,18;CL:0002420,1.45e-07,18;CL:0002419,1.45e-07,18;CL:0000790,1.45e-07,18;CL:0000839,1.71e-07,66;CL:0000860,2.56e-07,42;CL:0002057,2.56e-07,42;CL:0002009,8.83e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000051;6.77e-08;53!CL:0000790;1.72e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.21e-15!115;UBERON:0001049!1.46e-13!57;UBERON:0005068!1.46e-13!57;UBERON:0006241!1.46e-13!57;UBERON:0007135!1.46e-13!57;UBERON:0002780!4.29e-13!41;UBERON:0001890!4.29e-13!41;UBERON:0006240!4.29e-13!41;UBERON:0003080!7.30e-13!42;UBERON:0001017!8.10e-12!82;UBERON:0002616!6.92e-11!59;UBERON:0000955!7.37e-11!69;UBERON:0006238!7.37e-11!69;UBERON:0000073!7.90e-11!94;UBERON:0001016!7.90e-11!94;UBERON:0002020!1.06e-10!34;UBERON:0003528!1.06e-10!34;UBERON:0005743!3.56e-10!86;UBERON:0001893!5.10e-10!34;UBERON:0002791!6.06e-10!33;UBERON:0002390!1.07e-09!102;UBERON:0003061!1.07e-09!102;UBERON:0001869!1.31e-09!32;UBERON:0001474!6.21e-08!86;UBERON:0002193!7.35e-08!112;UBERON:0002619!9.07e-08!22;UBERON:0002371!1.48e-07!80;UBERON:0002346!2.45e-07!90;UBERON:0003075!3.69e-07!86;UBERON:0007284!3.69e-07!86;UBERON:0000956!4.20e-07!25;UBERON:0000203!4.20e-07!25;UBERON:0001950!5.07e-07!20 | |ontology_enrichment_uberon=UBERON:0007023!3.21e-15!115;UBERON:0001049!1.46e-13!57;UBERON:0005068!1.46e-13!57;UBERON:0006241!1.46e-13!57;UBERON:0007135!1.46e-13!57;UBERON:0002780!4.29e-13!41;UBERON:0001890!4.29e-13!41;UBERON:0006240!4.29e-13!41;UBERON:0003080!7.30e-13!42;UBERON:0001017!8.10e-12!82;UBERON:0002616!6.92e-11!59;UBERON:0000955!7.37e-11!69;UBERON:0006238!7.37e-11!69;UBERON:0000073!7.90e-11!94;UBERON:0001016!7.90e-11!94;UBERON:0002020!1.06e-10!34;UBERON:0003528!1.06e-10!34;UBERON:0005743!3.56e-10!86;UBERON:0001893!5.10e-10!34;UBERON:0002791!6.06e-10!33;UBERON:0002390!1.07e-09!102;UBERON:0003061!1.07e-09!102;UBERON:0001869!1.31e-09!32;UBERON:0001474!6.21e-08!86;UBERON:0002193!7.35e-08!112;UBERON:0002619!9.07e-08!22;UBERON:0002371!1.48e-07!80;UBERON:0002346!2.45e-07!90;UBERON:0003075!3.69e-07!86;UBERON:0007284!3.69e-07!86;UBERON:0000956!4.20e-07!25;UBERON:0000203!4.20e-07!25;UBERON:0001950!5.07e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.59e-10;41!UBERON:0001890;9.59e-10;41!UBERON:0003528;3.27e-09;34!UBERON:0002020;3.27e-09;34!UBERON:0002791;3.71e-09;32!UBERON:0001869;1.03e-08;32!UBERON:0001893;1.28e-08;34!UBERON:0000073;1.77e-08;53!UBERON:0002616;1.77e-08;53!UBERON:0002619;8.64e-08;22!UBERON:0000956;3.91e-07;25!UBERON:0000203;3.91e-07;25!UBERON:0001950;4.75e-07;20 | |||
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| ||
|short_description=p1@BDP1 | |short_description=p1@BDP1 | ||
}} | }} |
Latest revision as of 13:24, 18 September 2015
Short description: | p1@BDP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BDP1_5end |
Coexpression cluster: | C986_cerebellum_CD4_granulocyte_Mast_pineal_non_pituitary |
Association with transcript: | 0bp_to_ENST00000444711_5end |
EntrezGene: | BDP1 |
HGNC: | 13652 |
UniProt: | C9JGV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.06e-22 | 168 |
leukocyte | 9.78e-22 | 136 |
hematopoietic cell | 6.96e-21 | 177 |
hematopoietic oligopotent progenitor cell | 1.96e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.96e-20 | 161 |
hematopoietic lineage restricted progenitor cell | 8.73e-20 | 120 |
nongranular leukocyte | 8.11e-19 | 115 |
lymphocyte | 5.54e-13 | 53 |
common lymphoid progenitor | 5.54e-13 | 53 |
lymphoid lineage restricted progenitor cell | 8.60e-13 | 52 |
granulocyte monocyte progenitor cell | 5.19e-09 | 67 |
myeloid cell | 6.78e-09 | 108 |
common myeloid progenitor | 6.78e-09 | 108 |
myeloid leukocyte | 1.40e-07 | 72 |
mature alpha-beta T cell | 1.45e-07 | 18 |
alpha-beta T cell | 1.45e-07 | 18 |
immature T cell | 1.45e-07 | 18 |
mature T cell | 1.45e-07 | 18 |
immature alpha-beta T cell | 1.45e-07 | 18 |
myeloid lineage restricted progenitor cell | 1.71e-07 | 66 |
classical monocyte | 2.56e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.56e-07 | 42 |
macrophage dendritic cell progenitor | 8.83e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.75e-15 | 114 |
neural tube | 9.79e-14 | 56 |
neural rod | 9.79e-14 | 56 |
future spinal cord | 9.79e-14 | 56 |
neural keel | 9.79e-14 | 56 |
regional part of nervous system | 3.45e-13 | 53 |
regional part of brain | 3.45e-13 | 53 |
regional part of forebrain | 4.29e-13 | 41 |
forebrain | 4.29e-13 | 41 |
anterior neural tube | 4.29e-13 | 41 |
future forebrain | 4.29e-13 | 41 |
nervous system | 1.58e-12 | 89 |
central nervous system | 6.51e-12 | 81 |
brain | 5.79e-11 | 68 |
future brain | 5.79e-11 | 68 |
brain grey matter | 1.06e-10 | 34 |
gray matter | 1.06e-10 | 34 |
telencephalon | 5.10e-10 | 34 |
regional part of telencephalon | 5.14e-10 | 32 |
cerebral hemisphere | 1.31e-09 | 32 |
hematopoietic system | 5.02e-09 | 98 |
blood island | 5.02e-09 | 98 |
regional part of cerebral cortex | 9.07e-08 | 22 |
bone element | 2.73e-07 | 82 |
hemolymphoid system | 3.00e-07 | 108 |
cerebral cortex | 4.20e-07 | 25 |
pallium | 4.20e-07 | 25 |
neocortex | 5.07e-07 | 20 |
bone marrow | 6.48e-07 | 76 |
neurectoderm | 7.06e-07 | 86 |