FFCP PHASE1:Hg19::chr15:57211064..57211075,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:57211064..57211075,+
|short_description=p12@TCF12
|description=CAGE_peak_12_at_TCF12_5end
|association_with_transcript=34bp_to_ENST00000557843_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6938 | |EntrezGene=6938 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11623 | |HGNC=11623 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=34bp_to_ENST00000557843_5end | |||
|cluster_id=chr15:57211064..57211075,+ | |||
|description=CAGE_peak_12_at_TCF12_5end | |||
|id=chr15:57211064..57211075,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.67e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.39e-14!57;UBERON:0005068!2.39e-14!57;UBERON:0006241!2.39e-14!57;UBERON:0007135!2.39e-14!57;UBERON:0001017!6.78e-14!82;UBERON:0000955!2.96e-13!69;UBERON:0006238!2.96e-13!69;UBERON:0002616!3.84e-13!59;UBERON:0005743!8.01e-13!86;UBERON:0002780!1.13e-12!41;UBERON:0001890!1.13e-12!41;UBERON:0006240!1.13e-12!41;UBERON:0003080!4.39e-12!42;UBERON:0007023!7.14e-12!115;UBERON:0000073!1.23e-11!94;UBERON:0001016!1.23e-11!94;UBERON:0001893!7.92e-11!34;UBERON:0002020!9.47e-11!34;UBERON:0003528!9.47e-11!34;UBERON:0002791!2.04e-10!33;UBERON:0001869!1.80e-09!32;UBERON:0002308!5.31e-08!9;UBERON:0000125!5.31e-08!9;UBERON:0002346!7.77e-08!90;UBERON:0003075!8.80e-08!86;UBERON:0007284!8.80e-08!86;UBERON:0009663!5.61e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;2.81e-21;2!UBERON:0010225;2.81e-21;2!UBERON:0002038;2.67e-11;1!UBERON:0000941;2.67e-11;1!UBERON:0001785;2.67e-11;1!UBERON:0002464;2.67e-11;1!UBERON:0004904;2.67e-11;1!UBERON:0001021;2.67e-11;1!UBERON:0009661;2.67e-11;1!UBERON:0002950;2.67e-11;1!UBERON:0001891;2.67e-11;1!UBERON:0002784;4.02e-11;4!UBERON:0002420;1.58e-10;9!UBERON:0007245;1.58e-10;9!UBERON:0010009;1.58e-10;9!UBERON:0010011;1.58e-10;9!UBERON:0000454;1.58e-10;9!UBERON:0002108;4.49e-09;4!UBERON:0002780;2.84e-07;41!UBERON:0001890;2.84e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001897,1.70e-21,2;UBERON:0010225,1.70e-21,2;UBERON:0002038,1.60e-11,1;UBERON:0009661,1.60e-11,1;UBERON:0002950,1.60e-11,1;UBERON:0001891,1.60e-11,1;UBERON:0009616,1.60e-11,1;UBERON:0010286,1.60e-11,1;UBERON:0000941,2.18e-11,1;UBERON:0001785,2.18e-11,1;UBERON:0002464,2.18e-11,1;UBERON:0004904,2.18e-11,1;UBERON:0001021,2.18e-11,1;UBERON:0003902,2.18e-11,1;UBERON:0005425,2.18e-11,1;UBERON:0002784,3.12e-11,4;UBERON:0002420,1.74e-10,9;UBERON:0007245,1.74e-10,9;UBERON:0010009,1.74e-10,9;UBERON:0010011,1.74e-10,9;UBERON:0000454,1.74e-10,9;UBERON:0002108,3.67e-09,4;UBERON:0002780,3.45e-08,41;UBERON:0001890,3.45e-08,41;UBERON:0003080,3.45e-08,41;UBERON:0006240,3.45e-08,41;UBERON:0003056,3.15e-07,61;UBERON:0001894,8.86e-07,7;UBERON:0006222,8.86e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,1.34465029290355,0,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0,0,0.152826811495903,0.0821005894499457,0.157421562627358,0,0.383829398097213,0.309632246632152,0,0,0,0.387336002901508,0.284338464974843,0,0,0.601633342410425,0,0.447830948479849,0,0,0,0,0,0,0,0.619412741790207,0,0.256160706529101,0.236482229888585,0,0,0,0.376484679085209,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0,0.212604299965044,0.209658645508376,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0.357198913136319,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0.168776332241266,0.194874010322397,0.252433774244115,0.184099797284599,0.323292113637624,0,0,0,0.57978255948989,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.368965315629341,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0.500170521059677,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.647142602455851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.241718899183244,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.27470839445503,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0.2023155617111,0,0,0.6970372701606,0.308033580176089,0,0,0,0.143124886741991,0,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0.159426272728822,0,0.5745161103971,0,0,0.561594356226918,0,0.313359791546046,0,0.338583555603207,0,0,0,0,0.921722292925374,0.223676107892416,0.333698283423817,0,0.278406173895242,0,0,0,1.4098700508785,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,1.1253553312841,0,0.329607748453519,0.211125408127993,0.597743964753209,0.552567831062295,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0.236387681767936,0,0,0,0.885741385813839,0.60298219312704,0,0.221158519862449,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0.217294743844016,0,0.0915975934018623,0,1.02193298195737,0,0.332423363800313,0.225595660617181,0.19606253431774,0,0.37950746544837,0.317873157960757,0.210998064528027,0,0.141353071433941,0,0,0.884575645033392,2.4441205797345,0,0.123563938946503,0.104421949505455,0.808813595768125,0,0.937057782901357,0.182454789215666,0,0,0,0,0.61214552326098,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,0.50648636764703,0.195551382734803,0,0.426905989478705,0,0.144090417154106,0.114536596165916,1.02956998717179,0,0,0.235694034616795,0.135904206073614,0.104602846312333,0,0.288950589901519,1.20084057741958,0.958337652243951,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.201550417460179,0.360299883542404,0,0.315132729228895,0.247247575143499,0.13480708770837,0.295282444544246,0,0,0.681017030557878,0.160753148465019,0.137539436597234,0,0,0,0.485996453264197,0,0.236417121897595,0.367182116944987,0,0,0,0,0,0,0,0,0.326587360109409,0,0.164185041498678,0.170388021785422,0.113312091520126,0,1.32506888912221,0.517131825446202,0.26446520348538,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0.121792598380896,0,0,0.2506898940227,0,0,0.314108192500469,0,0.366078794705889,0.876336514945499,0,0.998361463831671,0.558867626472451,0.138348634936231,0,0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| ||
|short_description=p12@TCF12 | |||
}} | }} |
Latest revision as of 05:53, 18 September 2015
Short description: | p12@TCF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TCF12_5end |
Coexpression cluster: | NA |
Association with transcript: | 34bp_to_ENST00000557843_5end |
EntrezGene: | TCF12 |
HGNC: | 11623 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dorsal plus ventral thalamus | 1.70e-21 | 2 |
thalamic complex | 1.70e-21 | 2 |
substantia nigra | 1.60e-11 | 1 |
midbrain nucleus | 1.60e-11 | 1 |
regional part of midbrain | 1.60e-11 | 1 |
midbrain | 1.60e-11 | 1 |
presumptive midbrain | 1.60e-11 | 1 |
midbrain neural tube | 1.60e-11 | 1 |
cranial nerve II | 2.18e-11 | 1 |
cranial nerve | 2.18e-11 | 1 |
nerve trunk | 2.18e-11 | 1 |
nerve connecting eye with brain | 2.18e-11 | 1 |
nerve | 2.18e-11 | 1 |
retinal neural layer | 2.18e-11 | 1 |
presumptive neural retina | 2.18e-11 | 1 |
regional part of diencephalon | 3.12e-11 | 4 |
basal ganglion | 1.74e-10 | 9 |
nuclear complex of neuraxis | 1.74e-10 | 9 |
aggregate regional part of brain | 1.74e-10 | 9 |
collection of basal ganglia | 1.74e-10 | 9 |
cerebral subcortex | 1.74e-10 | 9 |
small intestine | 3.67e-09 | 4 |
regional part of forebrain | 3.45e-08 | 41 |
forebrain | 3.45e-08 | 41 |
anterior neural tube | 3.45e-08 | 41 |
future forebrain | 3.45e-08 | 41 |
pre-chordal neural plate | 3.15e-07 | 61 |
diencephalon | 8.86e-07 | 7 |
future diencephalon | 8.86e-07 | 7 |