FFCP PHASE1:Hg19::chr6:12957705..12957721,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221692 | |EntrezGene=221692 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20990 | |HGNC=20990 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=114bp_to_ENST00000482982_5end | |association_with_transcript=114bp_to_ENST00000482982_5end | ||
|cluster_id=chr6:12957705..12957721,+ | |||
|description=CAGE_peak_13_at_PHACTR1_5end | |description=CAGE_peak_13_at_PHACTR1_5end | ||
|id=chr6:12957705..12957721,+ | |id=chr6:12957705..12957721,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.03e-10;3!CL:1000428;1.03e-10;3!CL:0002032;3.31e-09;1!CL:0000557;3.31e-09;1!CL:0000037;4.52e-09;1!CL:0001024;4.52e-09;1!CL:0002559;9.17e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,9.35e-11,3;CL:1000428,9.35e-11,3;CL:0001024,5.28e-09,1;CL:0002559,8.66e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.17e-08;1!UBERON:0005425;1.17e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;3.06e-09;1!DOID:8692;3.33e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,3.06e-09,1;DOID:8692,3.69e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.42e-28!115;UBERON:0001049!1.48e-15!57;UBERON:0005068!1.48e-15!57;UBERON:0006241!1.48e-15!57;UBERON:0007135!1.48e-15!57;UBERON:0003075!2.15e-15!86;UBERON:0007284!2.15e-15!86;UBERON:0002346!5.51e-14!90;UBERON:0002616!2.70e-12!59;UBERON:0002780!5.80e-12!41;UBERON:0001890!5.80e-12!41;UBERON:0006240!5.80e-12!41;UBERON:0003080!1.83e-11!42;UBERON:0001893!2.80e-10!34;UBERON:0003056!2.98e-10!61;UBERON:0001017!4.06e-10!82;UBERON:0002020!5.89e-10!34;UBERON:0003528!5.89e-10!34;UBERON:0000955!7.90e-10!69;UBERON:0006238!7.90e-10!69;UBERON:0005743!9.29e-10!86;UBERON:0002791!1.02e-09!33;UBERON:0001869!5.20e-09!32;UBERON:0000073!7.06e-09!94;UBERON:0001016!7.06e-09!94;UBERON:0002619!8.13e-09!22;UBERON:0000153!1.07e-08!129;UBERON:0007811!1.07e-08!129;UBERON:0000033!1.55e-07!123;UBERON:0001950!1.62e-07!20;UBERON:0000956!3.40e-07!25;UBERON:0000203!3.40e-07!25;UBERON:0004121!5.01e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!2.42e-28!115;UBERON:0001049!1.48e-15!57;UBERON:0005068!1.48e-15!57;UBERON:0006241!1.48e-15!57;UBERON:0007135!1.48e-15!57;UBERON:0003075!2.15e-15!86;UBERON:0007284!2.15e-15!86;UBERON:0002346!5.51e-14!90;UBERON:0002616!2.70e-12!59;UBERON:0002780!5.80e-12!41;UBERON:0001890!5.80e-12!41;UBERON:0006240!5.80e-12!41;UBERON:0003080!1.83e-11!42;UBERON:0001893!2.80e-10!34;UBERON:0003056!2.98e-10!61;UBERON:0001017!4.06e-10!82;UBERON:0002020!5.89e-10!34;UBERON:0003528!5.89e-10!34;UBERON:0000955!7.90e-10!69;UBERON:0006238!7.90e-10!69;UBERON:0005743!9.29e-10!86;UBERON:0002791!1.02e-09!33;UBERON:0001869!5.20e-09!32;UBERON:0000073!7.06e-09!94;UBERON:0001016!7.06e-09!94;UBERON:0002619!8.13e-09!22;UBERON:0000153!1.07e-08!129;UBERON:0007811!1.07e-08!129;UBERON:0000033!1.55e-07!123;UBERON:0001950!1.62e-07!20;UBERON:0000956!3.40e-07!25;UBERON:0000203!3.40e-07!25;UBERON:0004121!5.01e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.03e-10;3!UBERON:0001992;1.03e-10;3!UBERON:0002134;4.52e-09;1!UBERON:0005208;4.52e-09;1!UBERON:0004145;4.52e-09;1!UBERON:0005946;4.52e-09;1!UBERON:0005965;4.52e-09;1!UBERON:0002078;4.52e-09;1!UBERON:0002363;1.17e-08;1!UBERON:0000941;1.17e-08;1!UBERON:0001785;1.17e-08;1!UBERON:0002464;1.17e-08;1!UBERON:0004904;1.17e-08;1!UBERON:0001021;1.17e-08;1!UBERON:0002073;9.17e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,9.35e-11,3;UBERON:0001992,9.35e-11,3;UBERON:0002134,4.52e-09,1;UBERON:0005208,4.52e-09,1;UBERON:0005946,4.52e-09,1;UBERON:0005965,4.52e-09,1;UBERON:0002078,4.52e-09,1;UBERON:0002363,1.05e-08,1;UBERON:0007645,1.05e-08,1;UBERON:0007647,1.05e-08,1;UBERON:0010115,1.05e-08,1;UBERON:0000941,1.22e-08,1;UBERON:0001785,1.22e-08,1;UBERON:0002464,1.22e-08,1;UBERON:0004904,1.22e-08,1;UBERON:0001021,1.22e-08,1;UBERON:0003902,1.22e-08,1;UBERON:0005425,1.22e-08,1;UBERON:0002073,8.66e-07,5;UBERON:0005086,8.66e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0.246242116153576,0.204000691244253,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05520307534393,0,0.200544447470142,0,0.223915474239924,0.32389366601898,0,0,0,0.242584061187816,0.232429036905685,0.411167888021826,0.309706370895104,0.575384784644301,0,0.236482229888585,0,0,0,0,0,0.674170453335254,0.306083892370903,0,0,0.989553900560148,0.199463657621632,0,0,0.56738522469114,0.622822248995575,0.502497330513487,0,0.434377689410233,0,0.368277635987565,0,0.845021145247767,0.212604299965044,0.209658645508376,0.112328631146495,0,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.756278537312543,0,0.527008714158756,0.589405839739707,0.364295288292542,0,0,0,0,2.14641561874808,0.571994910780128,0.74291500265913,0.198762407366705,0,0,0,0,0.550236083880135,0,0,0.71153252537342,0.66944122552934,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0,0,0,0,0,0,0,0.516628905878827,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,1.56449532329816,0.643240938192885,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0.179060963239896,0.784596007954691,0,0,0,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0.620304078368662,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,1.13733384070897,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0,0,0.510450849978337,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,1.1974762285969,1.53204296105893,2.32840940996271,0,0.561594356226918,2.05411211129873,0,0,1.69291777801603,0.321176150207399,0.201799707191048,0.851692475380653,1.37402137902306,0,0,0,0.390776190804081,0,0,0.811367035427949,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.984685914873589,0.111308705022906,0.329607748453519,0,0.597743964753209,0,0,0,0,0,0,0,0.511572370226872,0.986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.331737779793674,0,0.87754158861589,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0.470940769185074,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.606610196826093,0,0.234264445725339,0,0,0,0,0,0,1.45329133145522,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0.794858446811959,0.633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.547621515567972,3.83239764200917,0.429765441419957,0.262887354279314,0,0.458320848023367,2.15361907373044,0.199679000498991,0,0,0.335917362433631,0,0,0,0,0,0,4.9110532598155,0.795229689809303,0.408610218334727,0,0.137539436597234,0,0,0,0.546746009922222,0,0.788057072991982,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.453248366080503,0.146552233678082,0,0.258565912723101,0.26446520348538,0,0,0.961086713109252,0.628817220398664,0.828478110694391,0.496166021811951,0.197611631897944,0,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0.3755727921195,0,0.221858103073705,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0.449803112163605,0.155262956876259,0,0,0.521745061811734,0.300515217994437,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0.607719912354764,0.829550616910385,0,0,0.163565394255844,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47317047000752,0,0,0,0.449604575675217,1.41696576325585,0.638535436228605,0.205116364240755,0,0.414943514785307,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0.472763092328763,0.781078098613847,0.620060389503552,0.634158101939068,0,0.548257766857182,0.992422356778588,0,0,0.535701835878287,0.336283722218824,0.606965604236632,0,0.177404740325278,0,0,0.475788130837822,0.855046056317038,0,0,0.549451649953598,0.471346769748006,0,1.82631744101899,0,0,0.500335809236594,0,0,0,0,0,0,0,0.430227358820278,0,0.170426809518315,0,0,0,0,0,0,0,0,0,2.3196288626764,0,0,0,0,0,0,0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|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0.246242116153576,0.204000691244253,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05520307534393,0,0.200544447470142,0,0.223915474239924,0.32389366601898,0,0,0,0.242584061187816,0.232429036905685,0.411167888021826,0.309706370895104,0.575384784644301,0,0.236482229888585,0,0,0,0,0,0.674170453335254,0.306083892370903,0,0,0.989553900560148,0.199463657621632,0,0,0.56738522469114,0.622822248995575,0.502497330513487,0,0.434377689410233,0,0.368277635987565,0,0.845021145247767,0.212604299965044,0.209658645508376,0.112328631146495,0,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.756278537312543,0,0.527008714158756,0.589405839739707,0.364295288292542,0,0,0,0,2.14641561874808,0.571994910780128,0.74291500265913,0.198762407366705,0,0,0,0,0.550236083880135,0,0,0.71153252537342,0.66944122552934,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0,0,0,0,0,0,0,0.516628905878827,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,1.56449532329816,0.643240938192885,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0.179060963239896,0.784596007954691,0,0,0,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0.620304078368662,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,1.13733384070897,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0,0,0.510450849978337,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,1.1974762285969,1.53204296105893,2.32840940996271,0,0.561594356226918,2.05411211129873,0,0,1.69291777801603,0.321176150207399,0.201799707191048,0.851692475380653,1.37402137902306,0,0,0,0.390776190804081,0,0,0.811367035427949,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.984685914873589,0.111308705022906,0.329607748453519,0,0.597743964753209,0,0,0,0,0,0,0,0.511572370226872,0.986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.331737779793674,0,0.87754158861589,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0.470940769185074,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.606610196826093,0,0.234264445725339,0,0,0,0,0,0,1.45329133145522,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0.794858446811959,0.633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.547621515567972,3.83239764200917,0.429765441419957,0.262887354279314,0,0.458320848023367,2.15361907373044,0.199679000498991,0,0,0.335917362433631,0,0,0,0,0,0,4.9110532598155,0.795229689809303,0.408610218334727,0,0.137539436597234,0,0,0,0.546746009922222,0,0.788057072991982,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.453248366080503,0.146552233678082,0,0.258565912723101,0.26446520348538,0,0,0.961086713109252,0.628817220398664,0.828478110694391,0.496166021811951,0.197611631897944,0,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0.3755727921195,0,0.221858103073705,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0.449803112163605,0.155262956876259,0,0,0.521745061811734,0.300515217994437,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0.607719912354764,0.829550616910385,0,0,0.163565394255844,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47317047000752,0,0,0,0.449604575675217,1.41696576325585,0.638535436228605,0.205116364240755,0,0.414943514785307,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0,0.472763092328763,0.781078098613847,0.620060389503552,0.634158101939068,0,0.548257766857182,0.992422356778588,0,0,0.535701835878287,0.336283722218824,0.606965604236632,0,0.177404740325278,0,0,0.475788130837822,0.855046056317038,0,0,0.549451649953598,0.471346769748006,0,1.82631744101899,0,0,0.500335809236594,0,0,0,0,0,0,0,0.430227358820278,0,0.170426809518315,0,0,0,0,0,0,0,0,0,2.3196288626764,0,0,0,0,0,0,0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| ||
|short_description=p13@PHACTR1 | |short_description=p13@PHACTR1 | ||
}} | }} |
Latest revision as of 16:23, 24 September 2015
Short description: | p13@PHACTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PHACTR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 114bp_to_ENST00000482982_5end |
EntrezGene: | PHACTR1 |
HGNC: | 20990 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 9.35e-11 | 3 |
stem cell of epidermis | 9.35e-11 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 5.28e-09 | 1 |
hair follicle cell | 8.66e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 9.35e-11 | 3 |
papillary layer of dermis | 9.35e-11 | 3 |
tricuspid valve | 4.52e-09 | 1 |
right atrium valve | 4.52e-09 | 1 |
outflow tract of atrium | 4.52e-09 | 1 |
outflow part of right atrium | 4.52e-09 | 1 |
right cardiac atrium | 4.52e-09 | 1 |
dura mater | 1.05e-08 | 1 |
future meninx | 1.05e-08 | 1 |
ectomeninx | 1.05e-08 | 1 |
future dura mater | 1.05e-08 | 1 |
cranial nerve II | 1.22e-08 | 1 |
cranial nerve | 1.22e-08 | 1 |
nerve trunk | 1.22e-08 | 1 |
nerve connecting eye with brain | 1.22e-08 | 1 |
nerve | 1.22e-08 | 1 |
retinal neural layer | 1.22e-08 | 1 |
presumptive neural retina | 1.22e-08 | 1 |
hair follicle | 8.66e-07 | 5 |
hair follicle placode | 8.66e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.06e-09 | 1 |
myeloid leukemia | 3.69e-08 | 31 |