FFCP PHASE1:Hg19::chr6:138413333..138413389,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:138413333..138413389,- | |||
|coexpression_cluster_id=C1043 | |||
|description=CAGE_peak_at_chr6:138413333..138413389,- | |description=CAGE_peak_at_chr6:138413333..138413389,- | ||
|id=chr6:138413333..138413389,- | |id=chr6:138413333..138413389,- | ||
|ontology_enrichment_celltype=CL:0000066!9.40e-25!254;CL:0002076!2.16e-13!43;CL:0000223!1.19e-12!59;CL:0002251!3.53e-09!21;CL:0002321!1.87e-07!248;CL:0000220!3.08e-07!246 | |ontology_enrichment_celltype=CL:0000066!9.40e-25!254;CL:0002076!2.16e-13!43;CL:0000223!1.19e-12!59;CL:0002251!3.53e-09!21;CL:0002321!1.87e-07!248;CL:0000220!3.08e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002159;4.07e-12;14!CL:0000244;2.01e-11;4!CL:0000731;2.01e-11;4!CL:0002076;5.31e-11;42!CL:0000622;2.55e-10;5!CL:0002251;3.31e-10;20!CL:0002623;4.95e-10;3!CL:0002621;2.94e-09;3!CL:0002166;6.45e-09;3!CL:0000154;1.39e-08;6!CL:0000575;3.36e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.69e-14,42;CL:0002159,2.84e-12,14;CL:0000223,1.48e-11,58;CL:0000244,1.63e-11,4;CL:0000731,1.63e-11,4;CL:0000622,2.35e-10,5;CL:0002251,3.11e-10,20;CL:0002623,4.43e-10,3;CL:0002621,3.46e-09,3;CL:0000066,3.84e-09,253;CL:0002166,5.89e-09,3;CL:0000154,1.29e-08,6;CL:0000575,2.95e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.42e-11!106;DOID:0050687!2.77e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.06e-18!169;UBERON:0000925!1.06e-18!169;UBERON:0006595!1.06e-18!169;UBERON:0001007!7.29e-15!155;UBERON:0001555!7.29e-15!155;UBERON:0007026!7.29e-15!155;UBERON:0001004!8.76e-14!72;UBERON:0000161!1.08e-12!35;UBERON:0000077!2.41e-12!130;UBERON:0004921!1.01e-11!129;UBERON:0004185!1.01e-11!129;UBERON:0000165!2.79e-09!28;UBERON:0000930!2.79e-09!28;UBERON:0000166!5.61e-09!21;UBERON:0000065!1.06e-08!53;UBERON:0008947!1.36e-07!38;UBERON:0003258!1.36e-07!38;UBERON:0001041!2.29e-07!98;UBERON:0000464!2.42e-07!104 | |ontology_enrichment_uberon=UBERON:0004119!1.06e-18!169;UBERON:0000925!1.06e-18!169;UBERON:0006595!1.06e-18!169;UBERON:0001007!7.29e-15!155;UBERON:0001555!7.29e-15!155;UBERON:0007026!7.29e-15!155;UBERON:0001004!8.76e-14!72;UBERON:0000161!1.08e-12!35;UBERON:0000077!2.41e-12!130;UBERON:0004921!1.01e-11!129;UBERON:0004185!1.01e-11!129;UBERON:0000165!2.79e-09!28;UBERON:0000930!2.79e-09!28;UBERON:0000166!5.61e-09!21;UBERON:0000065!1.06e-08!53;UBERON:0008947!1.36e-07!38;UBERON:0003258!1.36e-07!38;UBERON:0001041!2.29e-07!98;UBERON:0000464!2.42e-07!104 | ||
|ontology_enrichment_uberon_v019=UBERON:0001044;4.24e-12;6!UBERON:0003293;4.24e-12;6!UBERON:0003294;4.24e-12;6!UBERON:0010047;4.24e-12;6!UBERON:0003408;4.24e-12;6!UBERON:0000167;4.24e-12;6!UBERON:0000161;7.73e-11;19!UBERON:0000166;7.73e-11;19!UBERON:0000486;1.29e-10;12!UBERON:0000165;2.83e-10;28!UBERON:0001041;2.48e-09;14!UBERON:0001949;2.94e-09;3!UBERON:0000365;3.84e-09;5!UBERON:0005910;1.28e-07;6!UBERON:0001708;8.83e-07;4!UBERON:0008895;8.83e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,1.06e-13,22;UBERON:0001044,4.48e-12,6;UBERON:0003293,4.48e-12,6;UBERON:0003294,4.48e-12,6;UBERON:0010047,4.48e-12,6;UBERON:0000167,4.48e-12,6;UBERON:0000161,8.24e-11,36;UBERON:0000033,1.41e-10,56;UBERON:0000153,1.68e-10,62;UBERON:0007811,1.68e-10,62;UBERON:0000165,8.44e-10,29;UBERON:0000930,8.44e-10,29;UBERON:0003102,9.47e-10,99;UBERON:0000365,3.25e-09,5;UBERON:0001949,3.46e-09,3;UBERON:0001004,4.76e-08,74;UBERON:0005910,1.12e-07,6;UBERON:0001444,3.95e-07,49;UBERON:0003408,4.40e-07,10;UBERON:0001708,8.26e-07,4;UBERON:0008895,8.26e-07,4;UBERON:0004119,9.11e-07,160;UBERON:0000925,9.11e-07,160;UBERON:0006595,9.11e-07,160 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.281908808191942,0,0.893922188854576,0,0,0,0,0.982935746006035,1.39560233594486,0.218441372130172,0.527533956456907,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.434539556882471,0,0,0.283604451492204,0,0.175669571386252,0,2.91436230634034,6.3033355273353,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,1.25849830862972,0.275118041940067,0,0.775250277507987,0,0,0,1.52054421143703,0.24406205754817,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,1.74437620857014,0.496971951695318,0.25326102332916,0.132409180813219,0,0,0,1.06748995729705,0.49333509683432,0,0.404132016209064,0.490385709340376,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0.408308342509787,0,0.103325781175765,0,0,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0,0.206105058476878,0,0,0.168776332241266,0.0974370051611986,0,0,0.323292113637624,0,0,0,2.70565194428616,1.36373060295417,2.00763216772303,0.365921118388786,0.132529768321485,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0.473227200159376,0.168584690078102,0.723033089650446,0.772057809126758,0.653638332277218,0.474541238222193,0.674156540800822,0.98110732562673,2.30848294167834,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,3.62175941848464,0,1.80952150340936,0.833296006426766,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0,1.87467667973554,2.35174979478403,1.13420077793909,0.806026704325635,0.871901815541886,0.383382679165211,0,0,0,0,0,0,0.381988425558278,0,0,0.308482478109971,0,0.285826432630578,0.224262168690721,0.43596006883328,0.36669142910475,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.599837947092342,0,0,0,0,0,0,0.579125226670317,0.205476322550383,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0.623912584592421,1.60586089917446,0.946214490203608,0.702848489956279,0,4.5481500811197,1.03473071292505,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0.909382714338778,0,0.907170879989041,0,0,0,0.896974044789907,0.511707249066704,0.160853921143607,0,0.154209693802656,0.355123450626254,0.328508624055237,0.519254429183621,0.232420756919918,0.483437798366489,7.41873940122154,3.77532054637175,0.34444334449382,0.910455840033585,0.917870904715969,0.902399225814824,0.462092022626489,0,0,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0.515205058238611,0,0.082509499920588,0,6.50060246036521,0,0,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,2.97512847649761,0.960950336825531,0.765676274967505,2.93357564481095,0,0.94443704049192,0,0.308033580176089,0,0.869932992075073,0,0,0.744316738719335,0.316379424718726,0.38126038784765,0,0,0,0,0,0.274537029736055,0.353437207037059,0.202182481573316,0,0.421258456238981,0,0,0,0.136499911407986,0.282810863907425,0,0.551365343546124,0.66343897524122,1.31535265576129,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0.673554789078584,0.670302275535787,2.17781969722645,0.376575203107117,1.29151611801369,1.68471475667626,5.32116184244011,1.37834040124176,0,0,0,0,0,0,0,0,0.213648142254946,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0.561421621224659,0,0,0.222886768554957,0.284136146806413,3.58116727106535,0.890894042497916,4.30024982938925,0,0,0,0.329607748453519,0,0.597743964753209,0.276283915531148,0.251932747854276,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0.520855522170466,0,0,2.04828206913899,0,0.472775363535873,0,0,0.173624994933292,0,0,0,0,0.295547618953547,0,0.32681539055697,1.53366118706464,0.153900517007594,0.113942055847001,0,1.07709173291727,0.325942115766024,2.23300811812344,0.457987967009312,2.66517388009317,0,0,0,0,0,0,0,0,0.843992258112108,0,1.27217764290547,0,0,0.176915129006678,0,0,0.370691816839509,0.104421949505455,0,0,0,0,0.391329237864179,0.242780379534093,0.394584402849391,0,0,0.063186579628488,0.300646838828985,0,0,0.330991955875499,0.313932918407225,0,0,0.138674673013139,1.21491816834592,0.293977192243133,0.261177619741208,0.52418000472609,0,0.387025325156341,0.0730893170861856,0.410577285266046,9.31094558288826,0.176512253383001,0.225980740780532,0.274083849293502,0,0.0633107959558787,0.391102765469606,0.160317640503067,0.213452994739353,0.999048047910651,0.144090417154106,0,0.171594997861965,0.432164393964449,0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| ||
|short_description=p@chr6:138413333..138413389,- | |short_description=p@chr6:138413333..138413389,- | ||
}} | }} |
Latest revision as of 20:06, 30 July 2015
Short description: | p@chr6:138413333..138413389, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:138413333..138413389, - |
Coexpression cluster: | C1043_keratoacanthoma_Prostate_tongue_amniotic_salivary_skin_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.69e-14 | 42 |
general ecto-epithelial cell | 2.84e-12 | 14 |
endodermal cell | 1.48e-11 | 58 |
transitional epithelial cell | 1.63e-11 | 4 |
urothelial cell | 1.63e-11 | 4 |
acinar cell | 2.35e-10 | 5 |
epithelial cell of alimentary canal | 3.11e-10 | 20 |
acinar cell of salivary gland | 4.43e-10 | 3 |
gingival epithelial cell | 3.46e-09 | 3 |
epithelial cell | 3.84e-09 | 253 |
epithelial cell of Malassez | 5.89e-09 | 3 |
protein secreting cell | 1.29e-08 | 6 |
corneal epithelial cell | 2.95e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
oral opening | 1.06e-13 | 22 |
saliva-secreting gland | 4.48e-12 | 6 |
gland of oral region | 4.48e-12 | 6 |
gland of foregut | 4.48e-12 | 6 |
oral gland | 4.48e-12 | 6 |
oral cavity | 4.48e-12 | 6 |
orifice | 8.24e-11 | 36 |
head | 1.41e-10 | 56 |
anterior region of body | 1.68e-10 | 62 |
craniocervical region | 1.68e-10 | 62 |
mouth | 8.44e-10 | 29 |
stomodeum | 8.44e-10 | 29 |
surface structure | 9.47e-10 | 99 |
urothelium | 3.25e-09 | 5 |
gingival epithelium | 3.46e-09 | 3 |
respiratory system | 4.76e-08 | 74 |
transitional epithelium | 1.12e-07 | 6 |
subdivision of head | 3.95e-07 | 49 |
gland of gut | 4.40e-07 | 10 |
jaw skeleton | 8.26e-07 | 4 |
splanchnocranium | 8.26e-07 | 4 |
endoderm-derived structure | 9.11e-07 | 160 |
endoderm | 9.11e-07 | 160 |
presumptive endoderm | 9.11e-07 | 160 |