FFCP PHASE1:Hg19::chr6:151004774..151004794,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57480 | |EntrezGene=57480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=20884 | |HGNC=20884 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_uc011eem.1_5end | |association_with_transcript=-16bp_to_uc011eem.1_5end | ||
|cluster_id=chr6:151004774..151004794,+ | |||
|coexpression_cluster_id=C1971 | |||
|description=CAGE_peak_4_at_PLEKHG1_5end | |description=CAGE_peak_4_at_PLEKHG1_5end | ||
|id=chr6:151004774..151004794,+ | |id=chr6:151004774..151004794,+ | ||
|ontology_enrichment_celltype=CL:0002139!5.95e-25!24;CL:0000115!4.53e-21!35;CL:0000071!4.69e-18!18;CL:0002546!4.69e-18!18;CL:0002078!7.62e-15!44;CL:0000213!1.65e-09!57;CL:0000215!1.65e-09!57;CL:1000413!1.28e-08!9;CL:0005020!1.64e-08!6;CL:0002138!1.64e-08!6;CL:0005022!1.64e-08!6;CL:0002543!5.91e-08!6 | |ontology_enrichment_celltype=CL:0002139!5.95e-25!24;CL:0000115!4.53e-21!35;CL:0000071!4.69e-18!18;CL:0002546!4.69e-18!18;CL:0002078!7.62e-15!44;CL:0000213!1.65e-09!57;CL:0000215!1.65e-09!57;CL:1000413!1.28e-08!9;CL:0005020!1.64e-08!6;CL:0002138!1.64e-08!6;CL:0005022!1.64e-08!6;CL:0002543!5.91e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;7.02e-29;24!CL:0000115;1.73e-21;36!CL:0000071;2.02e-21;18!CL:0002078;1.91e-12;45!CL:0002543;2.42e-11;6!CL:0002138;5.13e-09;6!CL:0000213;6.47e-09;58!CL:0000215;6.47e-09;58!CL:1000413;9.03e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.43e-29,24;CL:0000115,6.02e-26,36;CL:0000071,2.03e-21,18;CL:0002546,2.03e-21,18;CL:0002078,2.72e-19,45;CL:0000213,2.10e-13,58;CL:0000215,2.10e-13,58;CL:0002543,2.84e-11,6;CL:0005020,3.89e-09,6;CL:0002138,3.89e-09,6;CL:0005022,3.89e-09,6;CL:1000413,8.79e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002546;2.02e-21;18!UBERON:0004872;6.22e-10;7!CL:0005022;5.13e-09;6!UBERON:0006601;6.15e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.85e-68!115;UBERON:0001049!8.07e-37!57;UBERON:0005068!8.07e-37!57;UBERON:0006241!8.07e-37!57;UBERON:0007135!8.07e-37!57;UBERON:0003080!3.33e-31!42;UBERON:0002780!3.41e-30!41;UBERON:0001890!3.41e-30!41;UBERON:0006240!3.41e-30!41;UBERON:0002616!1.31e-29!59;UBERON:0002020!5.44e-27!34;UBERON:0003528!5.44e-27!34;UBERON:0003075!2.59e-26!86;UBERON:0007284!2.59e-26!86;UBERON:0001893!2.83e-26!34;UBERON:0004111!6.21e-26!241;UBERON:0000955!1.88e-25!69;UBERON:0006238!1.88e-25!69;UBERON:0002791!2.04e-25!33;UBERON:0001017!5.63e-25!82;UBERON:0000025!2.14e-24!194;UBERON:0002346!2.29e-24!90;UBERON:0001869!2.58e-24!32;UBERON:0005743!4.94e-24!86;UBERON:0000477!1.07e-22!286;UBERON:0000073!1.86e-21!94;UBERON:0001016!1.86e-21!94;UBERON:0002619!1.80e-20!22;UBERON:0003056!1.08e-18!61;UBERON:0001950!2.91e-18!20;UBERON:0001986!4.69e-18!18;UBERON:0004638!4.69e-18!18;UBERON:0004852!4.69e-18!18;UBERON:0000956!2.90e-17!25;UBERON:0000203!2.90e-17!25;UBERON:0000483!2.89e-14!309;UBERON:0000119!7.28e-14!312;UBERON:0000487!1.00e-13!22;UBERON:0000153!2.82e-13!129;UBERON:0007811!2.82e-13!129;UBERON:0000033!5.93e-12!123;UBERON:0000467!7.90e-12!625;UBERON:0000480!9.65e-12!626;UBERON:0002308!1.14e-11!9;UBERON:0000125!1.14e-11!9;UBERON:0002420!1.77e-11!9;UBERON:0007245!1.77e-11!9;UBERON:0010009!1.77e-11!9;UBERON:0010011!1.77e-11!9;UBERON:0000454!1.77e-11!9;UBERON:0006914!2.03e-11!25;UBERON:0000468!3.44e-11!659;UBERON:0004121!2.52e-10!169;UBERON:0002298!3.81e-10!8;UBERON:0000924!1.01e-09!173;UBERON:0006601!1.01e-09!173;UBERON:0001871!3.09e-09!7;UBERON:0009663!3.78e-09!7;UBERON:0000055!6.26e-09!69;UBERON:0000064!1.05e-08!219;UBERON:0003915!1.28e-08!9;UBERON:0004700!1.28e-08!9;UBERON:0001917!1.28e-08!9;UBERON:0000062!5.36e-08!511;UBERON:0000922!8.88e-08!612;UBERON:0000200!1.50e-07!6;UBERON:0002050!1.61e-07!605;UBERON:0005423!1.61e-07!605;UBERON:0002465!3.36e-07!10;UBERON:0000923!3.50e-07!604;UBERON:0005291!3.50e-07!604;UBERON:0006598!3.50e-07!604;UBERON:0002532!3.50e-07!604;UBERON:0003076!3.82e-07!15;UBERON:0003057!3.82e-07!15;UBERON:0000349!6.15e-07!5;UBERON:0004872!8.37e-07!84;UBERON:0002049!9.48e-07!79;UBERON:0007798!9.48e-07!79 | |ontology_enrichment_uberon=UBERON:0007023!6.85e-68!115;UBERON:0001049!8.07e-37!57;UBERON:0005068!8.07e-37!57;UBERON:0006241!8.07e-37!57;UBERON:0007135!8.07e-37!57;UBERON:0003080!3.33e-31!42;UBERON:0002780!3.41e-30!41;UBERON:0001890!3.41e-30!41;UBERON:0006240!3.41e-30!41;UBERON:0002616!1.31e-29!59;UBERON:0002020!5.44e-27!34;UBERON:0003528!5.44e-27!34;UBERON:0003075!2.59e-26!86;UBERON:0007284!2.59e-26!86;UBERON:0001893!2.83e-26!34;UBERON:0004111!6.21e-26!241;UBERON:0000955!1.88e-25!69;UBERON:0006238!1.88e-25!69;UBERON:0002791!2.04e-25!33;UBERON:0001017!5.63e-25!82;UBERON:0000025!2.14e-24!194;UBERON:0002346!2.29e-24!90;UBERON:0001869!2.58e-24!32;UBERON:0005743!4.94e-24!86;UBERON:0000477!1.07e-22!286;UBERON:0000073!1.86e-21!94;UBERON:0001016!1.86e-21!94;UBERON:0002619!1.80e-20!22;UBERON:0003056!1.08e-18!61;UBERON:0001950!2.91e-18!20;UBERON:0001986!4.69e-18!18;UBERON:0004638!4.69e-18!18;UBERON:0004852!4.69e-18!18;UBERON:0000956!2.90e-17!25;UBERON:0000203!2.90e-17!25;UBERON:0000483!2.89e-14!309;UBERON:0000119!7.28e-14!312;UBERON:0000487!1.00e-13!22;UBERON:0000153!2.82e-13!129;UBERON:0007811!2.82e-13!129;UBERON:0000033!5.93e-12!123;UBERON:0000467!7.90e-12!625;UBERON:0000480!9.65e-12!626;UBERON:0002308!1.14e-11!9;UBERON:0000125!1.14e-11!9;UBERON:0002420!1.77e-11!9;UBERON:0007245!1.77e-11!9;UBERON:0010009!1.77e-11!9;UBERON:0010011!1.77e-11!9;UBERON:0000454!1.77e-11!9;UBERON:0006914!2.03e-11!25;UBERON:0000468!3.44e-11!659;UBERON:0004121!2.52e-10!169;UBERON:0002298!3.81e-10!8;UBERON:0000924!1.01e-09!173;UBERON:0006601!1.01e-09!173;UBERON:0001871!3.09e-09!7;UBERON:0009663!3.78e-09!7;UBERON:0000055!6.26e-09!69;UBERON:0000064!1.05e-08!219;UBERON:0003915!1.28e-08!9;UBERON:0004700!1.28e-08!9;UBERON:0001917!1.28e-08!9;UBERON:0000062!5.36e-08!511;UBERON:0000922!8.88e-08!612;UBERON:0000200!1.50e-07!6;UBERON:0002050!1.61e-07!605;UBERON:0005423!1.61e-07!605;UBERON:0002465!3.36e-07!10;UBERON:0000923!3.50e-07!604;UBERON:0005291!3.50e-07!604;UBERON:0006598!3.50e-07!604;UBERON:0002532!3.50e-07!604;UBERON:0003076!3.82e-07!15;UBERON:0003057!3.82e-07!15;UBERON:0000349!6.15e-07!5;UBERON:0004872!8.37e-07!84;UBERON:0002049!9.48e-07!79;UBERON:0007798!9.48e-07!79 | ||
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|short_description=p4@PLEKHG1 | |short_description=p4@PLEKHG1 | ||
}} | }} |
Latest revision as of 04:02, 16 September 2015
Short description: | p4@PLEKHG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PLEKHG1_5end |
Coexpression cluster: | C1971_spleen_Endothelial_heart_lung_adipose_mature_locus |
Association with transcript: | -16bp_to_uc011eem.1_5end |
EntrezGene: | PLEKHG1 |
HGNC: | 20884 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.43e-29 | 24 |
endothelial cell | 6.02e-26 | 36 |
blood vessel endothelial cell | 2.03e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.03e-21 | 18 |
meso-epithelial cell | 2.72e-19 | 45 |
lining cell | 2.10e-13 | 58 |
barrier cell | 2.10e-13 | 58 |
vein endothelial cell | 2.84e-11 | 6 |
lymphangioblast | 3.89e-09 | 6 |
endothelial cell of lymphatic vessel | 3.89e-09 | 6 |
vascular lymphangioblast | 3.89e-09 | 6 |
endothelial cell of artery | 8.79e-08 | 9 |