FFCP PHASE1:Hg19::chr6:29910623..29910663,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3105 | |EntrezGene=3105 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4931 | |HGNC=4931 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=89bp_to_uc011dmc.1_5end | |association_with_transcript=89bp_to_uc011dmc.1_5end | ||
|cluster_id=chr6:29910623..29910663,+ | |||
|description=CAGE_peak_4_at_HLA-A_5end | |description=CAGE_peak_4_at_HLA-A_5end | ||
|id=chr6:29910623..29910663,+ | |id=chr6:29910623..29910663,+ | ||
|ontology_enrichment_celltype=CL:0000738!7.07e-29!140;CL:0002087!2.61e-27!119;CL:0002031!1.70e-24!124;CL:0002057!5.81e-21!42;CL:0000766!8.23e-20!76;CL:0000860!3.29e-19!45;CL:0002032!2.56e-18!165;CL:0000837!2.56e-18!165;CL:0000037!2.97e-18!172;CL:0000566!2.97e-18!172;CL:0000988!6.41e-18!182;CL:0002194!7.35e-18!63;CL:0000576!7.35e-18!63;CL:0000040!7.35e-18!63;CL:0000559!7.35e-18!63;CL:0002009!1.05e-17!65;CL:0000839!1.31e-15!70;CL:0000557!1.51e-15!71;CL:0000763!1.13e-09!112;CL:0000049!1.13e-09!112;CL:0000791!1.76e-09!18;CL:0000789!1.76e-09!18;CL:0002420!1.76e-09!18;CL:0002419!1.76e-09!18;CL:0000790!1.76e-09!18;CL:0000542!2.80e-09!53;CL:0000051!2.80e-09!53;CL:0000838!3.16e-09!52;CL:0000048!9.51e-08!430;CL:0000084!2.12e-07!25;CL:0000827!2.12e-07!25;CL:0000134!2.71e-07!358;CL:0000723!6.21e-07!436;CL:0000625!9.40e-07!11 | |ontology_enrichment_celltype=CL:0000738!7.07e-29!140;CL:0002087!2.61e-27!119;CL:0002031!1.70e-24!124;CL:0002057!5.81e-21!42;CL:0000766!8.23e-20!76;CL:0000860!3.29e-19!45;CL:0002032!2.56e-18!165;CL:0000837!2.56e-18!165;CL:0000037!2.97e-18!172;CL:0000566!2.97e-18!172;CL:0000988!6.41e-18!182;CL:0002194!7.35e-18!63;CL:0000576!7.35e-18!63;CL:0000040!7.35e-18!63;CL:0000559!7.35e-18!63;CL:0002009!1.05e-17!65;CL:0000839!1.31e-15!70;CL:0000557!1.51e-15!71;CL:0000763!1.13e-09!112;CL:0000049!1.13e-09!112;CL:0000791!1.76e-09!18;CL:0000789!1.76e-09!18;CL:0002420!1.76e-09!18;CL:0002419!1.76e-09!18;CL:0000790!1.76e-09!18;CL:0000542!2.80e-09!53;CL:0000051!2.80e-09!53;CL:0000838!3.16e-09!52;CL:0000048!9.51e-08!430;CL:0000084!2.12e-07!25;CL:0000827!2.12e-07!25;CL:0000134!2.71e-07!358;CL:0000723!6.21e-07!436;CL:0000625!9.40e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.11e-23;33!CL:0002057;1.11e-23;33!CL:0000473;2.50e-20;39!CL:0000234;2.50e-20;39!CL:0000576;8.81e-18;48!CL:0000791;7.36e-14;18!CL:0000789;7.36e-14;18!CL:0002419;7.36e-14;18!CL:0000766;3.61e-13;69!CL:0002087;1.17e-11;104!CL:0000625;2.42e-09;11!CL:0000084;2.76e-09;25!CL:0000738;7.01e-09;136!CL:0000094;5.34e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.36e-38,136;CL:0002087,1.07e-35,115;CL:0002031,1.22e-31,120;CL:0000473,4.80e-31,48;CL:0000234,4.80e-31,48;CL:0000860,3.26e-30,42;CL:0002057,3.26e-30,42;CL:0000766,6.41e-28,72;CL:0002194,5.36e-26,59;CL:0000576,5.36e-26,59;CL:0000040,5.36e-26,59;CL:0000559,5.36e-26,59;CL:0000037,7.92e-26,168;CL:0002009,8.82e-26,61;CL:0002032,1.00e-25,161;CL:0000837,1.00e-25,161;CL:0000988,4.29e-25,177;CL:0000557,7.04e-22,67;CL:0000839,2.19e-21,66;CL:0000763,2.60e-15,108;CL:0000049,2.60e-15,108;CL:0000791,4.39e-14,18;CL:0000789,4.39e-14,18;CL:0002420,4.39e-14,18;CL:0002419,4.39e-14,18;CL:0000790,4.39e-14,18;CL:0000838,1.54e-10,52;CL:0000542,3.80e-10,53;CL:0000051,3.80e-10,53;CL:0000625,8.75e-10,11;CL:0000084,2.00e-09,25;CL:0000827,2.00e-09,25;CL:0000134,1.39e-08,354;CL:0002320,7.62e-08,361;CL:0000048,1.04e-07,427;CL:0000723,3.77e-07,433;CL:0000094,5.04e-07,8;CL:0000034,5.69e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.68e-21;42!CL:0000790;7.36e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.93e-21!102;UBERON:0003061!5.93e-21!102;UBERON:0002193!3.27e-19!112;UBERON:0002371!1.47e-15!80;UBERON:0001474!5.11e-14!86;UBERON:0002405!4.66e-13!115;UBERON:0003081!7.40e-12!216;UBERON:0004765!2.74e-10!101;UBERON:0001434!2.74e-10!101;UBERON:0002204!3.97e-08!167;UBERON:0002384!7.01e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!5.93e-21!102;UBERON:0003061!5.93e-21!102;UBERON:0002193!3.27e-19!112;UBERON:0002371!1.47e-15!80;UBERON:0001474!5.11e-14!86;UBERON:0002405!4.66e-13!115;UBERON:0003081!7.40e-12!216;UBERON:0004765!2.74e-10!101;UBERON:0001434!2.74e-10!101;UBERON:0002204!3.97e-08!167;UBERON:0002384!7.01e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.56e-07;15!UBERON:0000179;2.56e-07;15!UBERON:0000463;2.56e-07;15 | |||
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| ||
|short_description=p4@HLA-A | |short_description=p4@HLA-A | ||
}} | }} |
Latest revision as of 15:03, 17 September 2015
Short description: | p4@HLA-A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HLA-A_5end |
Coexpression cluster: | NA |
Association with transcript: | 89bp_to_uc011dmc.1_5end |
EntrezGene: | HLA-A |
HGNC: | 4931 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.84e-27 | 98 |
blood island | 3.84e-27 | 98 |
hemolymphoid system | 1.74e-24 | 108 |
bone marrow | 1.38e-21 | 76 |
bone element | 1.55e-19 | 82 |
immune system | 1.23e-18 | 93 |
skeletal element | 3.48e-16 | 90 |
skeletal system | 4.29e-15 | 100 |
lateral plate mesoderm | 1.07e-14 | 203 |
musculoskeletal system | 1.36e-08 | 167 |
connective tissue | 5.96e-08 | 371 |
blood | 3.14e-07 | 15 |
haemolymphatic fluid | 3.14e-07 | 15 |
organism substance | 3.14e-07 | 15 |
mesoderm | 8.14e-07 | 315 |
mesoderm-derived structure | 8.14e-07 | 315 |
presumptive mesoderm | 8.14e-07 | 315 |