FFCP PHASE1:Hg19::chr6:32997441..32997457,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:32997441..32997457,+ | |||
|coexpression_cluster_id=C569 | |||
|description=CAGE_peak_at_chr6:32997441..32997457,+ | |description=CAGE_peak_at_chr6:32997441..32997457,+ | ||
|id=chr6:32997441..32997457,+ | |id=chr6:32997441..32997457,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.96e-66!140;CL:0002087!9.56e-65!119;CL:0002031!2.41e-61!124;CL:0002057!2.09e-54!42;CL:0000037!3.09e-54!172;CL:0000566!3.09e-54!172;CL:0000988!2.86e-52!182;CL:0002032!3.94e-51!165;CL:0000837!3.94e-51!165;CL:0000860!8.96e-50!45;CL:0002009!2.73e-49!65;CL:0002194!2.67e-46!63;CL:0000576!2.67e-46!63;CL:0000040!2.67e-46!63;CL:0000559!2.67e-46!63;CL:0000557!1.11e-43!71;CL:0000766!1.27e-41!76;CL:0000839!4.87e-40!70;CL:0000763!1.12e-31!112;CL:0000049!1.12e-31!112;CL:0000945!6.26e-22!24;CL:0000826!6.26e-22!24;CL:0000236!1.59e-18!14;CL:0000838!1.81e-17!52;CL:0000542!5.81e-17!53;CL:0000051!5.81e-17!53;CL:0002393!1.92e-13!9;CL:0002397!1.92e-13!9;CL:0000134!2.79e-13!358;CL:0002320!1.50e-12!365;CL:0000219!5.05e-10!390;CL:0000048!3.88e-07!430;CL:0000723!9.61e-07!436 | |ontology_enrichment_celltype=CL:0000738!3.96e-66!140;CL:0002087!9.56e-65!119;CL:0002031!2.41e-61!124;CL:0002057!2.09e-54!42;CL:0000037!3.09e-54!172;CL:0000566!3.09e-54!172;CL:0000988!2.86e-52!182;CL:0002032!3.94e-51!165;CL:0000837!3.94e-51!165;CL:0000860!8.96e-50!45;CL:0002009!2.73e-49!65;CL:0002194!2.67e-46!63;CL:0000576!2.67e-46!63;CL:0000040!2.67e-46!63;CL:0000559!2.67e-46!63;CL:0000557!1.11e-43!71;CL:0000766!1.27e-41!76;CL:0000839!4.87e-40!70;CL:0000763!1.12e-31!112;CL:0000049!1.12e-31!112;CL:0000945!6.26e-22!24;CL:0000826!6.26e-22!24;CL:0000236!1.59e-18!14;CL:0000838!1.81e-17!52;CL:0000542!5.81e-17!53;CL:0000051!5.81e-17!53;CL:0002393!1.92e-13!9;CL:0002397!1.92e-13!9;CL:0000134!2.79e-13!358;CL:0002320!1.50e-12!365;CL:0000219!5.05e-10!390;CL:0000048!3.88e-07!430;CL:0000723!9.61e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.37e-52;33!CL:0002057;1.37e-52;33!CL:0000576;3.95e-36;48!CL:0000473;4.26e-36;39!CL:0000234;4.26e-36;39!CL:0000236;6.71e-33;13!CL:0000766;4.53e-27;69!CL:0002087;3.55e-19;104!CL:0002393;5.48e-18;6!CL:0002397;5.48e-18;6!CL:0000945;6.77e-17;24!CL:0000738;8.46e-14;136!CL:0000767;1.25e-13;3!CL:0000763;9.61e-11;100!CL:0001014;2.31e-10;2!CL:0001016;2.31e-10;2!CL:0000988;4.86e-08;177!CL:0000219;5.21e-08;193!CL:0000840;2.36e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.37e-73,42;CL:0002057,4.37e-73,42;CL:0000473,4.04e-63,48;CL:0000234,4.04e-63,48;CL:0002009,1.88e-59,61;CL:0000738,1.54e-58,136;CL:0002087,2.33e-54,115;CL:0000557,1.43e-53,67;CL:0002194,4.35e-53,59;CL:0000576,4.35e-53,59;CL:0000040,4.35e-53,59;CL:0000559,4.35e-53,59;CL:0000766,1.01e-52,72;CL:0002031,3.76e-52,120;CL:0000037,4.25e-48,168;CL:0000839,7.94e-47,66;CL:0000988,3.18e-45,177;CL:0002032,1.63e-43,161;CL:0000837,1.63e-43,161;CL:0000763,5.43e-38,108;CL:0000049,5.43e-38,108;CL:0000236,1.91e-30,14;CL:0000134,3.06e-18,354;CL:0002320,1.03e-17,361;CL:0000945,6.44e-17,24;CL:0000826,6.44e-17,24;CL:0002393,1.42e-16,9;CL:0002397,1.42e-16,9;CL:0000219,7.45e-16,386;CL:0000767,1.03e-13,3;CL:0000048,1.41e-13,427;CL:0000723,2.90e-13,433;CL:0000034,7.40e-13,441;CL:0001014,2.53e-10,2;CL:0001016,2.53e-10,2;CL:0000840,2.23e-07,5;CL:0001029,2.23e-07,5;CL:0000838,9.20e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;8.28e-52;42!CL:0000049;2.43e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.41e-43!102;UBERON:0003061!9.41e-43!102;UBERON:0002371!9.93e-39!80;UBERON:0002193!1.49e-38!112;UBERON:0001474!7.90e-35!86;UBERON:0004765!2.54e-28!101;UBERON:0001434!2.54e-28!101;UBERON:0002405!3.65e-25!115;UBERON:0003081!1.13e-12!216;UBERON:0002384!1.46e-11!375;UBERON:0002204!1.70e-11!167;UBERON:0007023!6.83e-10!115 | |ontology_enrichment_uberon=UBERON:0002390!9.41e-43!102;UBERON:0003061!9.41e-43!102;UBERON:0002371!9.93e-39!80;UBERON:0002193!1.49e-38!112;UBERON:0001474!7.90e-35!86;UBERON:0004765!2.54e-28!101;UBERON:0001434!2.54e-28!101;UBERON:0002405!3.65e-25!115;UBERON:0003081!1.13e-12!216;UBERON:0002384!1.46e-11!375;UBERON:0002204!1.70e-11!167;UBERON:0007023!6.83e-10!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.06e-49,76;UBERON:0001474,1.41e-45,82;UBERON:0002390,2.62e-42,98;UBERON:0003061,2.62e-42,98;UBERON:0004765,6.37e-41,90;UBERON:0002405,2.22e-39,93;UBERON:0002193,1.01e-37,108;UBERON:0001434,3.86e-36,100;UBERON:0002204,8.50e-19,167;UBERON:0002384,5.41e-17,371;UBERON:0003081,1.38e-16,203;UBERON:0000926,4.73e-08,315;UBERON:0004120,4.73e-08,315;UBERON:0006603,4.73e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,0.903106483949403,0.472264687882075,1.96682138424452,2.30297638858328,5.88301268601089,0,0,0,0.232401601740905,0,1.46800219667424,6.09394949385065,5.21415563422368,2.82114131930607,0.895661896959697,0.971680998056939,0.515151135268373,0.436194716338694,1.51150377475524,0.242584061187816,0.464858073811369,1.6446715520873,0.309706370895104,4.60307827715441,3.84241059793651,4.49316236788312,1.72372840368309,3.22742341791913,2.70852973188684,0.564727018627814,0.272906150057846,0.449446968890169,2.14258724659632,1.92557416245656,3.83602275479425,2.30895910130701,2.59302754908121,1.70489900213078,0.870627715885752,1.70215567407342,1.24564449799115,2.51248665256743,4.69334626578181,4.56096573880745,0,1.10483290796269,2.84816148696796,0.845021145247767,1.27562579979026,1.67726916406701,2.92054440980887,0.150176892841506,0.48217676009124,1.14005097496499,0.39783335439818,0.365328307529268,1.75996244461323,3.82297027883492,0.889509253863555,3.41384178053206,2.40237592221607,5.74752439954483,3.30522436392431,6.67837628174755,8.53819453664173,7.6340834618222,6.49864487812889,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0.174129737299267,0,2.8618874916641,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.468008530278475,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2942852049117,2.02782359826544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0.562677665642051,0,0,0,0,0.276283915531148,0,0,0.246169610922139,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0.104421949505455,0.606610196826093,0,0,0.364909578431332,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.27450393947851,10.8332273638113,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.776503360757966,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664324201566815,0.490696182767533,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.0887023701626388,0.691403925334676,0,0.203909198930495,0.0657727735628491,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.594092800654172,0,0,0.375935671919414,0.322289439867886,0,0,0,0,0,0,0.860037498908708,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,0.903106483949403,0.472264687882075,1.96682138424452,2.30297638858328,5.88301268601089,0,0,0,0.232401601740905,0,1.46800219667424,6.09394949385065,5.21415563422368,2.82114131930607,0.895661896959697,0.971680998056939,0.515151135268373,0.436194716338694,1.51150377475524,0.242584061187816,0.464858073811369,1.6446715520873,0.309706370895104,4.60307827715441,3.84241059793651,4.49316236788312,1.72372840368309,3.22742341791913,2.70852973188684,0.564727018627814,0.272906150057846,0.449446968890169,2.14258724659632,1.92557416245656,3.83602275479425,2.30895910130701,2.59302754908121,1.70489900213078,0.870627715885752,1.70215567407342,1.24564449799115,2.51248665256743,4.69334626578181,4.56096573880745,0,1.10483290796269,2.84816148696796,0.845021145247767,1.27562579979026,1.67726916406701,2.92054440980887,0.150176892841506,0.48217676009124,1.14005097496499,0.39783335439818,0.365328307529268,1.75996244461323,3.82297027883492,0.889509253863555,3.41384178053206,2.40237592221607,5.74752439954483,3.30522436392431,6.67837628174755,8.53819453664173,7.6340834618222,6.49864487812889,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0.174129737299267,0,2.8618874916641,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.468008530278475,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2942852049117,2.02782359826544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0.562677665642051,0,0,0,0,0.276283915531148,0,0,0.246169610922139,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0.104421949505455,0.606610196826093,0,0,0.364909578431332,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.27450393947851,10.8332273638113,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.776503360757966,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664324201566815,0.490696182767533,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0.0887023701626388,0.691403925334676,0,0.203909198930495,0.0657727735628491,0,0,0,0.157115589916002,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.594092800654172,0,0,0.375935671919414,0.322289439867886,0,0,0,0,0,0,0.860037498908708,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,0,0,0,0,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr6:32997441..32997457,+ | |short_description=p@chr6:32997441..32997457,+ | ||
}} | }} |
Latest revision as of 00:34, 31 July 2015
Short description: | p@chr6:32997441..32997457, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:32997441..32997457, + |
Coexpression cluster: | C569_CD14_immature_CD19_Basophils_migratory_Dendritic_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.06e-49 | 76 |
bone element | 1.41e-45 | 82 |
hematopoietic system | 2.62e-42 | 98 |
blood island | 2.62e-42 | 98 |
skeletal element | 6.37e-41 | 90 |
immune system | 2.22e-39 | 93 |
hemolymphoid system | 1.01e-37 | 108 |
skeletal system | 3.86e-36 | 100 |
musculoskeletal system | 8.50e-19 | 167 |
connective tissue | 5.41e-17 | 371 |
lateral plate mesoderm | 1.38e-16 | 203 |
mesoderm | 4.73e-08 | 315 |
mesoderm-derived structure | 4.73e-08 | 315 |
presumptive mesoderm | 4.73e-08 | 315 |