FFCP PHASE1:Hg19::chr7:20581377..20581387,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:20581377..20581387,- | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_at_chr7:20581377..20581387,- | |description=CAGE_peak_at_chr7:20581377..20581387,- | ||
|id=chr7:20581377..20581387,- | |id=chr7:20581377..20581387,- | ||
|ontology_enrichment_celltype=CL:0002057!3.01e-63!42;CL:0000860!1.32e-58!45;CL:0002194!1.08e-53!63;CL:0000576!1.08e-53!63;CL:0000040!1.08e-53!63;CL:0000559!1.08e-53!63;CL:0002009!7.58e-52!65;CL:0000766!3.72e-50!76;CL:0000839!1.09e-47!70;CL:0000557!6.31e-47!71;CL:0002087!3.83e-36!119;CL:0000738!5.96e-36!140;CL:0000763!4.90e-34!112;CL:0000049!4.90e-34!112;CL:0000037!1.64e-29!172;CL:0000566!1.64e-29!172;CL:0000988!3.24e-29!182;CL:0002031!6.74e-28!124;CL:0002393!2.51e-24!9;CL:0002397!2.51e-24!9;CL:0002032!6.22e-24!165;CL:0000837!6.22e-24!165;CL:0000875!1.09e-14!3;CL:0002396!1.09e-14!3;CL:0000842!1.63e-13!3;CL:0000080!1.05e-11!6;CL:0000224!2.98e-10!4;CL:0000134!8.81e-10!358;CL:0002320!1.97e-09!365;CL:0000219!3.37e-08!390;CL:0000767!7.11e-07!3;CL:0000048!9.90e-07!430 | |ontology_enrichment_celltype=CL:0002057!3.01e-63!42;CL:0000860!1.32e-58!45;CL:0002194!1.08e-53!63;CL:0000576!1.08e-53!63;CL:0000040!1.08e-53!63;CL:0000559!1.08e-53!63;CL:0002009!7.58e-52!65;CL:0000766!3.72e-50!76;CL:0000839!1.09e-47!70;CL:0000557!6.31e-47!71;CL:0002087!3.83e-36!119;CL:0000738!5.96e-36!140;CL:0000763!4.90e-34!112;CL:0000049!4.90e-34!112;CL:0000037!1.64e-29!172;CL:0000566!1.64e-29!172;CL:0000988!3.24e-29!182;CL:0002031!6.74e-28!124;CL:0002393!2.51e-24!9;CL:0002397!2.51e-24!9;CL:0002032!6.22e-24!165;CL:0000837!6.22e-24!165;CL:0000875!1.09e-14!3;CL:0002396!1.09e-14!3;CL:0000842!1.63e-13!3;CL:0000080!1.05e-11!6;CL:0000224!2.98e-10!4;CL:0000134!8.81e-10!358;CL:0002320!1.97e-09!365;CL:0000219!3.37e-08!390;CL:0000767!7.11e-07!3;CL:0000048!9.90e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000875;2.28e-85;3!CL:0002396;2.28e-85;3!CL:0002393;1.33e-42;6!CL:0002397;1.33e-42;6!CL:0000576;3.13e-13;48!CL:0000766;2.39e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,4.43e-112,9;CL:0002397,4.43e-112,9;CL:0000875,2.28e-85,3;CL:0002396,2.28e-85,3;CL:0000860,1.91e-24,42;CL:0002057,1.91e-24,42;CL:0000473,1.94e-21,48;CL:0000234,1.94e-21,48;CL:0002194,3.20e-17,59;CL:0000576,3.20e-17,59;CL:0000040,3.20e-17,59;CL:0000559,3.20e-17,59;CL:0002009,1.12e-16,61;CL:0000839,1.87e-15,66;CL:0000557,3.12e-15,67;CL:0000766,3.29e-14,72;CL:0002087,3.65e-12,115;CL:0002031,1.14e-11,120;CL:0000738,2.51e-10,136;CL:0000763,1.37e-09,108;CL:0000049,1.37e-09,108;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.22e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;3.16e-29;1!DOID:0060061;3.16e-29;1!DOID:8691;3.16e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.37e-29,1;DOID:0060061,2.37e-29,1;DOID:8691,2.37e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.66e-46!102;UBERON:0003061!4.66e-46!102;UBERON:0002193!2.92e-41!112;UBERON:0002371!6.50e-41!80;UBERON:0001474!1.35e-37!86;UBERON:0004765!2.63e-33!101;UBERON:0001434!2.63e-33!101;UBERON:0002405!2.27e-28!115;UBERON:0003081!7.96e-19!216;UBERON:0002204!2.37e-17!167;UBERON:0002384!5.92e-09!375;UBERON:0000178!7.36e-07!15;UBERON:0000179!7.36e-07!15;UBERON:0000463!7.36e-07!15 | |ontology_enrichment_uberon=UBERON:0002390!4.66e-46!102;UBERON:0003061!4.66e-46!102;UBERON:0002193!2.92e-41!112;UBERON:0002371!6.50e-41!80;UBERON:0001474!1.35e-37!86;UBERON:0004765!2.63e-33!101;UBERON:0001434!2.63e-33!101;UBERON:0002405!2.27e-28!115;UBERON:0003081!7.96e-19!216;UBERON:0002204!2.37e-17!167;UBERON:0002384!5.92e-09!375;UBERON:0000178!7.36e-07!15;UBERON:0000179!7.36e-07!15;UBERON:0000463!7.36e-07!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.74e-13,76;UBERON:0001474,1.58e-12,82;UBERON:0004765,1.90e-11,90;UBERON:0002405,4.34e-11,93;UBERON:0002390,1.54e-10,98;UBERON:0003061,1.54e-10,98;UBERON:0001434,2.46e-10,100;UBERON:0002193,1.37e-09,108 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.619264493264304,0,0,0,0,0.142169232487422,0,0,0.802177789880567,0,0.447830948479849,0,0.515151135268373,0.290796477559129,0,0.485168122375632,0.464858073811369,0,0.619412741790207,0,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,0,0.564727018627814,0,0.449446968890169,0.612167784741805,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0,0,0.622822248995575,0.251248665256743,0,0.65156653411535,0,0,0.632924774881769,1.26753171787165,2.76385589954557,1.46761051855863,0,0,0.16072558669708,14.2506371870624,8.75233379675996,9.31587184199633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:20581377..20581387,- | |short_description=p@chr7:20581377..20581387,- | ||
}} | }} | ||
Latest revision as of 08:27, 31 July 2015
| Short description: | p@chr7:20581377..20581387, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr7:20581377..20581387, - |
| Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intermediate monocyte | 4.43e-112 | 9 |
| CD14-positive, CD16-positive monocyte | 4.43e-112 | 9 |
| non-classical monocyte | 2.28e-85 | 3 |
| CD14-low, CD16-positive monocyte | 2.28e-85 | 3 |
| classical monocyte | 1.91e-24 | 42 |
| CD14-positive, CD16-negative classical monocyte | 1.91e-24 | 42 |
| defensive cell | 1.94e-21 | 48 |
| phagocyte | 1.94e-21 | 48 |
| monopoietic cell | 3.20e-17 | 59 |
| monocyte | 3.20e-17 | 59 |
| monoblast | 3.20e-17 | 59 |
| promonocyte | 3.20e-17 | 59 |
| macrophage dendritic cell progenitor | 1.12e-16 | 61 |
| myeloid lineage restricted progenitor cell | 1.87e-15 | 66 |
| granulocyte monocyte progenitor cell | 3.12e-15 | 67 |
| myeloid leukocyte | 3.29e-14 | 72 |
| nongranular leukocyte | 3.65e-12 | 115 |
| hematopoietic lineage restricted progenitor cell | 1.14e-11 | 120 |
| leukocyte | 2.51e-10 | 136 |
| myeloid cell | 1.37e-09 | 108 |
| common myeloid progenitor | 1.37e-09 | 108 |
| hematopoietic oligopotent progenitor cell | 9.40e-09 | 161 |
| hematopoietic multipotent progenitor cell | 9.40e-09 | 161 |
| hematopoietic stem cell | 2.15e-08 | 168 |
| hematopoietic cell | 5.65e-08 | 177 |
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 1.74e-13 | 76 |
| bone element | 1.58e-12 | 82 |
| skeletal element | 1.90e-11 | 90 |
| immune system | 4.34e-11 | 93 |
| hematopoietic system | 1.54e-10 | 98 |
| blood island | 1.54e-10 | 98 |
| skeletal system | 2.46e-10 | 100 |
| hemolymphoid system | 1.37e-09 | 108 |
| Ontology term | p-value | n |
|---|---|---|
| non-Hodgkin lymphoma | 2.37e-29 | 1 |
| cutaneous T cell lymphoma | 2.37e-29 | 1 |
| mycosis fungoides | 2.37e-29 | 1 |