FFCP PHASE1:Hg19::chr8:101959111..101959114,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:101959111..101959114,- | |||
|coexpression_cluster_id=C306 | |||
|description=CAGE_peak_at_chr8:101959111..101959114,- | |description=CAGE_peak_at_chr8:101959111..101959114,- | ||
|id=chr8:101959111..101959114,- | |id=chr8:101959111..101959114,- | ||
|ontology_enrichment_celltype=CL:0000738!1.18e-34!140;CL:0000037!6.27e-30!172;CL:0000566!6.27e-30!172;CL:0002032!5.21e-28!165;CL:0000837!5.21e-28!165;CL:0002087!6.08e-28!119;CL:0000988!4.74e-27!182;CL:0002031!6.43e-27!124;CL:0000766!2.30e-23!76;CL:0002057!4.94e-23!42;CL:0000860!1.99e-21!45;CL:0000557!2.52e-19!71;CL:0002009!4.39e-19!65;CL:0000763!6.62e-19!112;CL:0000049!6.62e-19!112;CL:0002194!2.26e-18!63;CL:0000576!2.26e-18!63;CL:0000040!2.26e-18!63;CL:0000559!2.26e-18!63;CL:0000839!2.41e-18!70;CL:0000542!1.28e-08!53;CL:0000051!1.28e-08!53;CL:0000838!2.20e-08!52;CL:0000134!2.31e-07!358 | |ontology_enrichment_celltype=CL:0000738!1.18e-34!140;CL:0000037!6.27e-30!172;CL:0000566!6.27e-30!172;CL:0002032!5.21e-28!165;CL:0000837!5.21e-28!165;CL:0002087!6.08e-28!119;CL:0000988!4.74e-27!182;CL:0002031!6.43e-27!124;CL:0000766!2.30e-23!76;CL:0002057!4.94e-23!42;CL:0000860!1.99e-21!45;CL:0000557!2.52e-19!71;CL:0002009!4.39e-19!65;CL:0000763!6.62e-19!112;CL:0000049!6.62e-19!112;CL:0002194!2.26e-18!63;CL:0000576!2.26e-18!63;CL:0000040!2.26e-18!63;CL:0000559!2.26e-18!63;CL:0000839!2.41e-18!70;CL:0000542!1.28e-08!53;CL:0000051!1.28e-08!53;CL:0000838!2.20e-08!52;CL:0000134!2.31e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.49e-19;33!CL:0002057;1.49e-19;33!CL:0000473;1.22e-16;39!CL:0000234;1.22e-16;39!CL:0000576;1.19e-15;48!CL:0000766;4.12e-13;69!CL:0002087;1.50e-10;104!CL:0000738;4.43e-08;136!CL:0000763;1.92e-07;100!CL:0000084;5.51e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.61e-37,136;CL:0002087,3.44e-31,115;CL:0000037,1.13e-30,168;CL:0002031,4.31e-29,120;CL:0000988,7.15e-29,177;CL:0002032,7.59e-29,161;CL:0000837,7.59e-29,161;CL:0000860,2.13e-27,42;CL:0002057,2.13e-27,42;CL:0000473,3.97e-27,48;CL:0000234,3.97e-27,48;CL:0000766,9.63e-27,72;CL:0002009,1.15e-22,61;CL:0000557,2.83e-22,67;CL:0002194,8.30e-22,59;CL:0000576,8.30e-22,59;CL:0000040,8.30e-22,59;CL:0000559,8.30e-22,59;CL:0000839,1.02e-20,66;CL:0000763,1.01e-19,108;CL:0000049,1.01e-19,108;CL:0000542,1.17e-08,53;CL:0000051,1.17e-08,53;CL:0000838,2.19e-08,52;CL:0000134,1.52e-07,354;CL:0002393,2.33e-07,9;CL:0002397,2.33e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;5.68e-20;42 | |||
|ontology_enrichment_disease=DOID:162!3.08e-08!235;DOID:14566!1.70e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.66e-19!102;UBERON:0003061!6.66e-19!102;UBERON:0002193!5.18e-16!112;UBERON:0002371!2.47e-15!80;UBERON:0001474!1.53e-14!86;UBERON:0004765!5.73e-10!101;UBERON:0001434!5.73e-10!101;UBERON:0002405!1.76e-09!115 | |ontology_enrichment_uberon=UBERON:0002390!6.66e-19!102;UBERON:0003061!6.66e-19!102;UBERON:0002193!5.18e-16!112;UBERON:0002371!2.47e-15!80;UBERON:0001474!1.53e-14!86;UBERON:0004765!5.73e-10!101;UBERON:0001434!5.73e-10!101;UBERON:0002405!1.76e-09!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.04e-22,98;UBERON:0003061,8.04e-22,98;UBERON:0002193,3.21e-18,108;UBERON:0002371,4.74e-18,76;UBERON:0001474,1.04e-16,82;UBERON:0002405,1.91e-14,93;UBERON:0004765,4.51e-13,90;UBERON:0001434,1.49e-10,100 | |||
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| ||
|short_description=p@chr8:101959111..101959114,- | |short_description=p@chr8:101959111..101959114,- | ||
}} | }} |
Latest revision as of 13:30, 31 July 2015
Short description: | p@chr8:101959111..101959114, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:101959111..101959114, - |
Coexpression cluster: | C306_CD4_CD8_Neutrophils_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.61e-37 | 136 |
nongranular leukocyte | 3.44e-31 | 115 |
hematopoietic stem cell | 1.13e-30 | 168 |
hematopoietic lineage restricted progenitor cell | 4.31e-29 | 120 |
hematopoietic cell | 7.15e-29 | 177 |
hematopoietic oligopotent progenitor cell | 7.59e-29 | 161 |
hematopoietic multipotent progenitor cell | 7.59e-29 | 161 |
classical monocyte | 2.13e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.13e-27 | 42 |
defensive cell | 3.97e-27 | 48 |
phagocyte | 3.97e-27 | 48 |
myeloid leukocyte | 9.63e-27 | 72 |
macrophage dendritic cell progenitor | 1.15e-22 | 61 |
granulocyte monocyte progenitor cell | 2.83e-22 | 67 |
monopoietic cell | 8.30e-22 | 59 |
monocyte | 8.30e-22 | 59 |
monoblast | 8.30e-22 | 59 |
promonocyte | 8.30e-22 | 59 |
myeloid lineage restricted progenitor cell | 1.02e-20 | 66 |
myeloid cell | 1.01e-19 | 108 |
common myeloid progenitor | 1.01e-19 | 108 |
lymphocyte | 1.17e-08 | 53 |
common lymphoid progenitor | 1.17e-08 | 53 |
lymphoid lineage restricted progenitor cell | 2.19e-08 | 52 |
mesenchymal cell | 1.52e-07 | 354 |
intermediate monocyte | 2.33e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.33e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.04e-22 | 98 |
blood island | 8.04e-22 | 98 |
hemolymphoid system | 3.21e-18 | 108 |
bone marrow | 4.74e-18 | 76 |
bone element | 1.04e-16 | 82 |
immune system | 1.91e-14 | 93 |
skeletal element | 4.51e-13 | 90 |
skeletal system | 1.49e-10 | 100 |