FFCP PHASE1:Hg19::chr15:86212972..86212989,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:86212972..86212989,+
|short_description=p20@AKAP13
|description=CAGE_peak_20_at_AKAP13_5end
|association_with_transcript=0bp_to_BC063592_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11214 | |EntrezGene=11214 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=371 | |HGNC=371 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_BC063592_5end | |||
|cluster_id=chr15:86212972..86212989,+ | |||
|coexpression_cluster_id=C273 | |||
|description=CAGE_peak_20_at_AKAP13_5end | |||
|id=chr15:86212972..86212989,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.35e-23!42;CL:0000860!1.07e-22!45;CL:0000738!1.04e-21!140;CL:0000766!5.03e-19!76;CL:0000557!1.96e-18!71;CL:0002009!3.65e-17!65;CL:0000839!1.48e-16!70;CL:0002031!4.24e-16!124;CL:0002194!5.82e-16!63;CL:0000576!5.82e-16!63;CL:0000040!5.82e-16!63;CL:0000559!5.82e-16!63;CL:0002087!1.29e-15!119;CL:0000037!4.08e-15!172;CL:0000566!4.08e-15!172;CL:0002032!7.14e-14!165;CL:0000837!7.14e-14!165;CL:0000763!5.35e-13!112;CL:0000049!5.35e-13!112;CL:0000988!7.37e-13!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.05e-52;33!CL:0002057;5.05e-52;33!CL:0000473;4.96e-41;39!CL:0000234;4.96e-41;39!CL:0000576;1.65e-25;48!CL:0000766;2.72e-20;69!CL:0000763;5.11e-09;100!CL:0000738;7.67e-09;136!CL:0002087;1.94e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.35e-49,42;CL:0002057,5.35e-49,42;CL:0000473,1.17e-46,48;CL:0000234,1.17e-46,48;CL:0000557,1.95e-40,67;CL:0002009,1.96e-38,61;CL:0000766,6.59e-37,72;CL:0000839,2.34e-36,66;CL:0002194,4.55e-35,59;CL:0000576,4.55e-35,59;CL:0000040,4.55e-35,59;CL:0000559,4.55e-35,59;CL:0000738,3.07e-28,136;CL:0002031,3.80e-26,120;CL:0000763,4.77e-25,108;CL:0000049,4.77e-25,108;CL:0002087,2.11e-23,115;CL:0000037,4.72e-20,168;CL:0002032,2.05e-19,161;CL:0000837,2.05e-19,161;CL:0000988,2.67e-18,177;CL:0000134,4.10e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;7.36e-35;42!CL:0000049;1.28e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.27e-14!80;UBERON:0002390!1.93e-13!102;UBERON:0003061!1.93e-13!102;UBERON:0001474!5.19e-13!86;UBERON:0002193!2.08e-11!112;UBERON:0004765!3.36e-10!101;UBERON:0001434!3.36e-10!101;UBERON:0002405!2.93e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.11e-34,76;UBERON:0001474,7.39e-31,82;UBERON:0002390,6.97e-30,98;UBERON:0003061,6.97e-30,98;UBERON:0002193,1.97e-27,108;UBERON:0002405,2.06e-27,93;UBERON:0004765,4.62e-27,90;UBERON:0001434,3.50e-23,100;UBERON:0003081,1.24e-14,203;UBERON:0002204,3.26e-14,167;UBERON:0000926,5.32e-08,315;UBERON:0004120,5.32e-08,315;UBERON:0006603,5.32e-08,315 | |||
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| ||
|short_description=p20@AKAP13 | |||
}} | }} |
Latest revision as of 14:24, 19 September 2015
Short description: | p20@AKAP13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_AKAP13_5end |
Coexpression cluster: | C273_Neutrophils_CD14_Eosinophils_Monocytederived_CD4_Natural_Mast |
Association with transcript: | 0bp_to_BC063592_5end |
EntrezGene: | AKAP13 |
HGNC: | 371 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.35e-49 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.35e-49 | 42 |
defensive cell | 1.17e-46 | 48 |
phagocyte | 1.17e-46 | 48 |
granulocyte monocyte progenitor cell | 1.95e-40 | 67 |
macrophage dendritic cell progenitor | 1.96e-38 | 61 |
myeloid leukocyte | 6.59e-37 | 72 |
myeloid lineage restricted progenitor cell | 2.34e-36 | 66 |
monopoietic cell | 4.55e-35 | 59 |
monocyte | 4.55e-35 | 59 |
monoblast | 4.55e-35 | 59 |
promonocyte | 4.55e-35 | 59 |
leukocyte | 3.07e-28 | 136 |
hematopoietic lineage restricted progenitor cell | 3.80e-26 | 120 |
myeloid cell | 4.77e-25 | 108 |
common myeloid progenitor | 4.77e-25 | 108 |
nongranular leukocyte | 2.11e-23 | 115 |
hematopoietic stem cell | 4.72e-20 | 168 |
hematopoietic oligopotent progenitor cell | 2.05e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.05e-19 | 161 |
hematopoietic cell | 2.67e-18 | 177 |
mesenchymal cell | 4.10e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.11e-34 | 76 |
bone element | 7.39e-31 | 82 |
hematopoietic system | 6.97e-30 | 98 |
blood island | 6.97e-30 | 98 |
hemolymphoid system | 1.97e-27 | 108 |
immune system | 2.06e-27 | 93 |
skeletal element | 4.62e-27 | 90 |
skeletal system | 3.50e-23 | 100 |
lateral plate mesoderm | 1.24e-14 | 203 |
musculoskeletal system | 3.26e-14 | 167 |
mesoderm | 5.32e-08 | 315 |
mesoderm-derived structure | 5.32e-08 | 315 |
presumptive mesoderm | 5.32e-08 | 315 |