FFCP PHASE1:Hg19::chr4:26322267..26322334,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3516 | |EntrezGene=3516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5724 | |HGNC=5724 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc011bxt.1_5end | |association_with_transcript=0bp_to_uc011bxt.1_5end | ||
|cluster_id=chr4:26322267..26322334,+ | |||
|description=CAGE_peak_3_at_RBPJ_5end | |description=CAGE_peak_3_at_RBPJ_5end | ||
|id=chr4:26322267..26322334,+ | |id=chr4:26322267..26322334,+ | ||
|ontology_enrichment_celltype=CL:0002009!4.28e-14!65;CL:0002194!4.57e-13!63;CL:0000576!4.57e-13!63;CL:0000040!4.57e-13!63;CL:0000559!4.57e-13!63;CL:0000034!1.36e-12!444;CL:0000048!9.51e-12!430;CL:0000557!2.23e-11!71;CL:0000766!3.32e-11!76;CL:0000763!4.27e-11!112;CL:0000049!4.27e-11!112;CL:0000723!4.27e-11!436;CL:0002057!6.65e-11!42;CL:0000860!1.98e-10!45;CL:0000839!2.12e-09!70;CL:0002320!2.04e-08!365;CL:0000134!6.49e-08!358;CL:0002032!8.50e-08!165;CL:0000837!8.50e-08!165;CL:0000738!1.09e-07!140;CL:0002087!1.92e-07!119;CL:0000037!3.18e-07!172;CL:0000566!3.18e-07!172;CL:0000219!3.38e-07!390;CL:0000988!5.74e-07!182 | |ontology_enrichment_celltype=CL:0002009!4.28e-14!65;CL:0002194!4.57e-13!63;CL:0000576!4.57e-13!63;CL:0000040!4.57e-13!63;CL:0000559!4.57e-13!63;CL:0000034!1.36e-12!444;CL:0000048!9.51e-12!430;CL:0000557!2.23e-11!71;CL:0000766!3.32e-11!76;CL:0000763!4.27e-11!112;CL:0000049!4.27e-11!112;CL:0000723!4.27e-11!436;CL:0002057!6.65e-11!42;CL:0000860!1.98e-10!45;CL:0000839!2.12e-09!70;CL:0002320!2.04e-08!365;CL:0000134!6.49e-08!358;CL:0002032!8.50e-08!165;CL:0000837!8.50e-08!165;CL:0000738!1.09e-07!140;CL:0002087!1.92e-07!119;CL:0000037!3.18e-07!172;CL:0000566!3.18e-07!172;CL:0000219!3.38e-07!390;CL:0000988!5.74e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.44e-13;33!CL:0002057;1.44e-13;33!CL:0000473;3.18e-12;39!CL:0000234;3.18e-12;39!CL:0000576;2.05e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.05e-15,61;CL:0002194,2.73e-14,59;CL:0000576,2.73e-14,59;CL:0000040,2.73e-14,59;CL:0000559,2.73e-14,59;CL:0000034,3.54e-14,441;CL:0000048,6.00e-13,427;CL:0000473,1.63e-12,48;CL:0000234,1.63e-12,48;CL:0000557,1.94e-12,67;CL:0000723,2.02e-12,433;CL:0000766,2.09e-12,72;CL:0000763,1.25e-11,108;CL:0000049,1.25e-11,108;CL:0000860,1.51e-11,42;CL:0002057,1.51e-11,42;CL:0000839,3.16e-10,66;CL:0002320,2.50e-09,361;CL:0000134,9.40e-09,354;CL:0000219,5.38e-08,386;CL:0000738,1.04e-07,136;CL:0002032,1.54e-07,161;CL:0000837,1.54e-07,161;CL:0002087,2.73e-07,115;CL:0000988,4.30e-07,177;CL:0000037,4.80e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;1.33e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.93e-14!167;UBERON:0004765!2.74e-11!101;UBERON:0001434!2.74e-11!101;UBERON:0002390!6.73e-10!102;UBERON:0003061!6.73e-10!102;UBERON:0002371!7.28e-10!80;UBERON:0001474!1.31e-09!86;UBERON:0002384!2.50e-08!375;UBERON:0002193!4.16e-08!112 | |ontology_enrichment_uberon=UBERON:0002204!3.93e-14!167;UBERON:0004765!2.74e-11!101;UBERON:0001434!2.74e-11!101;UBERON:0002390!6.73e-10!102;UBERON:0003061!6.73e-10!102;UBERON:0002371!7.28e-10!80;UBERON:0001474!1.31e-09!86;UBERON:0002384!2.50e-08!375;UBERON:0002193!4.16e-08!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.95e-16,167;UBERON:0001434,7.55e-13,100;UBERON:0002371,4.75e-11,76;UBERON:0002390,6.08e-11,98;UBERON:0003061,6.08e-11,98;UBERON:0001474,8.72e-11,82;UBERON:0004765,9.14e-11,90;UBERON:0002405,1.13e-09,93;UBERON:0002193,2.20e-09,108;UBERON:0002384,5.25e-09,371;UBERON:0000926,1.16e-07,315;UBERON:0004120,1.16e-07,315;UBERON:0006603,1.16e-07,315 | |||
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| ||
|short_description=p3@RBPJ | |short_description=p3@RBPJ | ||
}} | }} |
Latest revision as of 11:12, 17 September 2015
Short description: | p3@RBPJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RBPJ_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc011bxt.1_5end |
EntrezGene: | RBPJ |
HGNC: | 5724 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 2.05e-15 | 61 |
monopoietic cell | 2.73e-14 | 59 |
monocyte | 2.73e-14 | 59 |
monoblast | 2.73e-14 | 59 |
promonocyte | 2.73e-14 | 59 |
stem cell | 3.54e-14 | 441 |
multi fate stem cell | 6.00e-13 | 427 |
defensive cell | 1.63e-12 | 48 |
phagocyte | 1.63e-12 | 48 |
granulocyte monocyte progenitor cell | 1.94e-12 | 67 |
somatic stem cell | 2.02e-12 | 433 |
myeloid leukocyte | 2.09e-12 | 72 |
myeloid cell | 1.25e-11 | 108 |
common myeloid progenitor | 1.25e-11 | 108 |
classical monocyte | 1.51e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.51e-11 | 42 |
myeloid lineage restricted progenitor cell | 3.16e-10 | 66 |
connective tissue cell | 2.50e-09 | 361 |
mesenchymal cell | 9.40e-09 | 354 |
motile cell | 5.38e-08 | 386 |
leukocyte | 1.04e-07 | 136 |
hematopoietic oligopotent progenitor cell | 1.54e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.54e-07 | 161 |
nongranular leukocyte | 2.73e-07 | 115 |
hematopoietic cell | 4.30e-07 | 177 |
hematopoietic stem cell | 4.80e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 7.95e-16 | 167 |
skeletal system | 7.55e-13 | 100 |
bone marrow | 4.75e-11 | 76 |
hematopoietic system | 6.08e-11 | 98 |
blood island | 6.08e-11 | 98 |
bone element | 8.72e-11 | 82 |
skeletal element | 9.14e-11 | 90 |
immune system | 1.13e-09 | 93 |
hemolymphoid system | 2.20e-09 | 108 |
connective tissue | 5.25e-09 | 371 |
mesoderm | 1.16e-07 | 315 |
mesoderm-derived structure | 1.16e-07 | 315 |
presumptive mesoderm | 1.16e-07 | 315 |