FFCP PHASE1:Hg19::chr4:85791647..85791659,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:85791647..85791659,- | |||
|coexpression_cluster_id=C4437 | |||
|description=CAGE_peak_at_chr4:85791647..85791659,- | |description=CAGE_peak_at_chr4:85791647..85791659,- | ||
|id=chr4:85791647..85791659,- | |id=chr4:85791647..85791659,- | ||
|ontology_enrichment_celltype=CL:0002139!4.76e-47!24;CL:0000071!1.64e-38!18;CL:0002546!1.64e-38!18;CL:0000115!2.63e-34!35;CL:0002078!2.69e-29!44;CL:1000413!3.66e-26!9;CL:0000213!7.58e-24!57;CL:0000215!7.58e-24!57;CL:0002543!3.96e-16!6;CL:0002544!4.21e-16!6;CL:0000076!8.76e-12!62;CL:0005020!3.08e-10!6;CL:0002138!3.08e-10!6;CL:0005022!3.08e-10!6;CL:0000222!1.11e-09!119;CL:0002545!7.92e-09!2;CL:0002321!1.11e-08!248;CL:0000066!1.11e-07!254;CL:0000220!2.15e-07!246 | |ontology_enrichment_celltype=CL:0002139!4.76e-47!24;CL:0000071!1.64e-38!18;CL:0002546!1.64e-38!18;CL:0000115!2.63e-34!35;CL:0002078!2.69e-29!44;CL:1000413!3.66e-26!9;CL:0000213!7.58e-24!57;CL:0000215!7.58e-24!57;CL:0002543!3.96e-16!6;CL:0002544!4.21e-16!6;CL:0000076!8.76e-12!62;CL:0005020!3.08e-10!6;CL:0002138!3.08e-10!6;CL:0005022!3.08e-10!6;CL:0000222!1.11e-09!119;CL:0002545!7.92e-09!2;CL:0002321!1.11e-08!248;CL:0000066!1.11e-07!254;CL:0000220!2.15e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.30e-43;24!CL:0000071;6.54e-33;18!CL:0002543;2.23e-25;6!CL:0000115;8.50e-24;36!CL:1000413;2.53e-17;9!CL:0002078;3.18e-17;45!CL:0002544;3.35e-12;6!CL:0000213;3.83e-12;58!CL:0000215;3.83e-12;58!CL:0002138;6.34e-12;6!CL:0000039;2.35e-10;7!CL:0000586;2.35e-10;7!CL:0002545;9.87e-10;2!CL:0000076;1.09e-08;63!CL:0002618;6.69e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.80e-43,24;CL:0000071,6.74e-33,18;CL:0002546,6.74e-33,18;CL:0000115,9.69e-29,36;CL:0002543,2.14e-25,6;CL:0002078,6.53e-23,45;CL:0000213,1.13e-17,58;CL:0000215,1.13e-17,58;CL:1000413,2.68e-17,9;CL:0002544,3.26e-12,6;CL:0005020,7.48e-12,6;CL:0002138,7.48e-12,6;CL:0005022,7.48e-12,6;CL:0000039,1.77e-10,7;CL:0000586,1.77e-10,7;CL:0002545,9.46e-10,2;CL:0000076,2.64e-09,63;CL:0000222,3.59e-08,121;CL:0002618,6.88e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;6.54e-33;18!CL:0005022;6.34e-12;6!UBERON:0009117;1.62e-07;10!UBERON:0005564;1.62e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;6.54e-33;18!UBERON:0001986;6.54e-33;18!UBERON:0004852;6.54e-33;18!UBERON:0000487;6.30e-27;22!UBERON:0006914;1.08e-23;25!UBERON:0007195;9.48e-18;1!UBERON:0003915;2.53e-17;9!UBERON:0004700;2.53e-17;9!UBERON:0001917;2.53e-17;9!UBERON:0001638;3.63e-17;9!UBERON:0003920;3.63e-17;9!UBERON:0004582;3.63e-17;9!UBERON:0000490;8.12e-17;33!UBERON:0005800;9.87e-10;2!UBERON:0001515;9.87e-10;2!UBERON:0002049;2.18e-09;75!UBERON:0007798;2.18e-09;75!UBERON:0000055;2.33e-09;65!UBERON:0000473;3.55e-09;8!UBERON:0001473;3.55e-09;8!UBERON:0004536;3.55e-09;8!UBERON:0006558;3.55e-09;8!UBERON:0002465;1.62e-07;10!UBERON:0007500;4.59e-07;56!UBERON:0001981;4.59e-07;56!UBERON:0004537;4.59e-07;56!UBERON:0003135;6.54e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.74e-33,18;UBERON:0001986,6.74e-33,18;UBERON:0004852,6.74e-33,18;UBERON:0000487,6.45e-27,22;UBERON:0006914,1.11e-23,25;UBERON:0007195,1.44e-17,1;UBERON:0003915,2.68e-17,9;UBERON:0004700,2.68e-17,9;UBERON:0001917,2.68e-17,9;UBERON:0001638,3.53e-17,9;UBERON:0003920,3.53e-17,9;UBERON:0004582,3.53e-17,9;UBERON:0000055,5.32e-15,68;UBERON:0002049,5.22e-13,78;UBERON:0007798,5.22e-13,78;UBERON:0007500,5.96e-10,59;UBERON:0001981,5.96e-10,59;UBERON:0004537,5.96e-10,59;UBERON:0006965,5.96e-10,59;UBERON:0005800,9.46e-10,2;UBERON:0001515,9.46e-10,2;UBERON:0000473,2.77e-09,8;UBERON:0004535,3.85e-09,109;UBERON:0001473,4.02e-09,8;UBERON:0004536,4.02e-09,8;UBERON:0006558,4.02e-09,8;UBERON:0001009,7.03e-09,112;UBERON:0002465,1.79e-07,10;UBERON:0004872,5.31e-07,83;UBERON:0003135,5.47e-07,11 | |||
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| ||
|short_description=p@chr4:85791647..85791659,- | |short_description=p@chr4:85791647..85791659,- | ||
}} | }} |
Latest revision as of 07:37, 30 July 2015
Short description: | p@chr4:85791647..85791659, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:85791647..85791659, - |
Coexpression cluster: | C4437_astrocytoma_Endothelial_testicular_mesothelioma_Renal_teratocarcinoma_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.80e-43 | 24 |
blood vessel endothelial cell | 6.74e-33 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.74e-33 | 18 |
endothelial cell | 9.69e-29 | 36 |
vein endothelial cell | 2.14e-25 | 6 |
meso-epithelial cell | 6.53e-23 | 45 |
lining cell | 1.13e-17 | 58 |
barrier cell | 1.13e-17 | 58 |
endothelial cell of artery | 2.68e-17 | 9 |
aortic endothelial cell | 3.26e-12 | 6 |
lymphangioblast | 7.48e-12 | 6 |
endothelial cell of lymphatic vessel | 7.48e-12 | 6 |
vascular lymphangioblast | 7.48e-12 | 6 |
germ line cell | 1.77e-10 | 7 |
germ cell | 1.77e-10 | 7 |
thoracic aorta endothelial cell | 9.46e-10 | 2 |
squamous epithelial cell | 2.64e-09 | 63 |
mesodermal cell | 3.59e-08 | 121 |
endothelial cell of umbilical vein | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 6.74e-33 | 18 |
endothelium | 6.74e-33 | 18 |
cardiovascular system endothelium | 6.74e-33 | 18 |
simple squamous epithelium | 6.45e-27 | 22 |
squamous epithelium | 1.11e-23 | 25 |
stroma of bone marrow | 1.44e-17 | 1 |
endothelial tube | 2.68e-17 | 9 |
arterial system endothelium | 2.68e-17 | 9 |
endothelium of artery | 2.68e-17 | 9 |
vein | 3.53e-17 | 9 |
venous blood vessel | 3.53e-17 | 9 |
venous system | 3.53e-17 | 9 |
vessel | 5.32e-15 | 68 |
vasculature | 5.22e-13 | 78 |
vascular system | 5.22e-13 | 78 |
epithelial tube open at both ends | 5.96e-10 | 59 |
blood vessel | 5.96e-10 | 59 |
blood vasculature | 5.96e-10 | 59 |
vascular cord | 5.96e-10 | 59 |
segment of aorta | 9.46e-10 | 2 |
thoracic aorta | 9.46e-10 | 2 |
testis | 2.77e-09 | 8 |
cardiovascular system | 3.85e-09 | 109 |
lymphatic vessel | 4.02e-09 | 8 |
lymph vasculature | 4.02e-09 | 8 |
lymphatic part of lymphoid system | 4.02e-09 | 8 |
circulatory system | 7.03e-09 | 112 |
lymphoid system | 1.79e-07 | 10 |
splanchnic layer of lateral plate mesoderm | 5.31e-07 | 83 |
male reproductive organ | 5.47e-07 | 11 |