FFCP PHASE1:Hg19::chr16:29826201..29826227,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:29826201..29826227,+
|short_description=p@chr16:29826201..29826227,+
|description=CAGE_peak_at_chr16:29826201..29826227,+
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:29826201..29826227,+ | |||
|coexpression_cluster_id=C1168 | |||
|description=CAGE_peak_at_chr16:29826201..29826227,+ | |||
|id=chr16:29826201..29826227,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.90e-08!6;CL:0000031!5.90e-08!6;CL:0000404!5.90e-08!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.63e-19;3!UBERON:0006601;2.01e-08;82!UBERON:0003056;2.27e-08;3!UBERON:0005425;6.87e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;6.87e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,6.88e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.40e-53!82;UBERON:0005743!1.33e-51!86;UBERON:0001049!1.82e-51!57;UBERON:0005068!1.82e-51!57;UBERON:0006241!1.82e-51!57;UBERON:0007135!1.82e-51!57;UBERON:0000073!4.67e-50!94;UBERON:0001016!4.67e-50!94;UBERON:0000955!9.08e-45!69;UBERON:0006238!9.08e-45!69;UBERON:0002616!2.21e-42!59;UBERON:0002780!1.17e-40!41;UBERON:0001890!1.17e-40!41;UBERON:0006240!1.17e-40!41;UBERON:0003080!2.22e-39!42;UBERON:0002346!6.06e-38!90;UBERON:0003075!7.18e-36!86;UBERON:0007284!7.18e-36!86;UBERON:0007023!1.10e-34!115;UBERON:0001893!1.99e-34!34;UBERON:0002020!8.49e-34!34;UBERON:0003528!8.49e-34!34;UBERON:0002791!3.59e-33!33;UBERON:0001869!2.63e-32!32;UBERON:0003056!1.25e-27!61;UBERON:0002619!1.20e-25!22;UBERON:0000924!2.06e-25!173;UBERON:0006601!2.06e-25!173;UBERON:0000153!3.54e-24!129;UBERON:0007811!3.54e-24!129;UBERON:0000956!6.90e-24!25;UBERON:0000203!6.90e-24!25;UBERON:0004121!1.08e-23!169;UBERON:0000033!2.36e-23!123;UBERON:0001950!4.93e-23!20;UBERON:0003076!8.01e-13!15;UBERON:0003057!8.01e-13!15;UBERON:0002420!1.52e-12!9;UBERON:0007245!1.52e-12!9;UBERON:0010009!1.52e-12!9;UBERON:0010011!1.52e-12!9;UBERON:0000454!1.52e-12!9;UBERON:0000025!2.03e-11!194;UBERON:0002308!2.33e-11!9;UBERON:0000125!2.33e-11!9;UBERON:0004732!9.39e-11!13;UBERON:0009663!7.12e-10!7;UBERON:0004733!1.56e-09!12;UBERON:0002028!1.56e-09!12;UBERON:0007277!1.56e-09!12;UBERON:0000200!1.88e-09!6;UBERON:0001871!3.30e-09!7;UBERON:0000349!4.02e-08!5;UBERON:0001872!4.26e-08!5;UBERON:0004111!4.81e-08!241;UBERON:0000475!7.71e-08!365;UBERON:0001894!1.50e-07!7;UBERON:0006222!1.50e-07!7;UBERON:0002298!7.19e-07!8;UBERON:0002680!7.50e-07!9;UBERON:0001895!7.50e-07!9;UBERON:0010092!7.50e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.48e-34;22!UBERON:0001950;6.07e-32;20!UBERON:0000956;2.71e-30;25!UBERON:0000203;2.71e-30;25!UBERON:0002791;2.29e-24;32!UBERON:0001869;2.66e-24;32!UBERON:0003528;3.28e-23;34!UBERON:0002020;3.28e-23;34!UBERON:0001893;8.11e-22;34!UBERON:0000073;8.40e-22;53!UBERON:0002616;8.40e-22;53!UBERON:0002780;1.00e-20;41!UBERON:0001890;1.00e-20;41!UBERON:0001871;1.86e-20;6!UBERON:0000955;1.37e-18;68!UBERON:0001016;1.46e-17;83!UBERON:0001017;1.21e-16;75!UBERON:0003296;4.05e-13;4!UBERON:0010133;4.05e-13;4!UBERON:0002771;1.44e-12;2!UBERON:0001876;2.03e-12;2!UBERON:0001905;4.05e-12;2!UBERON:0002757;4.05e-12;2!UBERON:0010134;4.05e-12;2!UBERON:0005408;4.05e-12;2!UBERON:0001899;4.05e-12;2!UBERON:0002021;2.00e-11;5!UBERON:0000349;5.93e-11;5!UBERON:0002037;1.22e-09;6!UBERON:0000200;2.35e-09;6!UBERON:0011216;3.98e-08;132!UBERON:0007023;6.97e-08;114!UBERON:0001894;1.05e-07;7!UBERON:0004732;1.89e-07;13!UBERON:0003112;2.37e-07;1!UBERON:0011158;2.37e-07;1!UBERON:0003128;2.37e-07;1!UBERON:0001703;2.37e-07;1!UBERON:0002241;2.37e-07;1!UBERON:0001874;3.39e-07;1!UBERON:0000941;6.87e-07;1!UBERON:0001785;6.87e-07;1!UBERON:0002464;6.87e-07;1!UBERON:0004904;6.87e-07;1!UBERON:0001021;6.87e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.96e-38,81;UBERON:0001016,3.37e-37,89;UBERON:0001049,1.45e-36,56;UBERON:0005068,1.45e-36,56;UBERON:0006241,1.45e-36,56;UBERON:0007135,1.45e-36,56;UBERON:0000955,2.06e-35,68;UBERON:0006238,2.06e-35,68;UBERON:0000073,6.98e-35,53;UBERON:0002616,6.98e-35,53;UBERON:0002619,1.51e-34,22;UBERON:0001950,6.00e-32,20;UBERON:0002780,6.75e-32,41;UBERON:0001890,6.75e-32,41;UBERON:0003080,6.75e-32,41;UBERON:0006240,6.75e-32,41;UBERON:0000956,2.76e-30,25;UBERON:0000203,2.76e-30,25;UBERON:0003075,3.98e-29,82;UBERON:0007284,3.98e-29,82;UBERON:0002346,1.43e-27,86;UBERON:0002791,1.74e-27,32;UBERON:0001869,1.74e-27,32;UBERON:0003056,3.05e-26,61;UBERON:0003528,9.19e-26,34;UBERON:0002020,9.19e-26,34;UBERON:0001893,9.19e-26,34;UBERON:0010371,4.83e-22,104;UBERON:0001871,1.59e-20,6;UBERON:0007023,8.46e-20,114;UBERON:0010314,3.06e-18,132;UBERON:0011216,3.15e-17,223;UBERON:0004121,3.72e-17,171;UBERON:0000924,3.72e-17,171;UBERON:0006601,3.72e-17,171;UBERON:0003296,7.61e-13,4;UBERON:0010133,7.61e-13,4;UBERON:0002771,1.28e-12,2;UBERON:0001876,2.04e-12,2;UBERON:0001905,8.97e-12,2;UBERON:0002757,8.97e-12,2;UBERON:0010134,8.97e-12,2;UBERON:0005408,8.97e-12,2;UBERON:0001899,8.97e-12,2;UBERON:0002021,2.18e-11,5;UBERON:0000349,6.15e-11,5;UBERON:0002037,1.18e-09,6;UBERON:0006215,1.18e-09,6;UBERON:0000200,2.23e-09,6;UBERON:0000025,8.30e-08,192;UBERON:0001894,1.49e-07,7;UBERON:0006222,1.49e-07,7;UBERON:0004732,1.76e-07,13;UBERON:0003112,2.23e-07,1;UBERON:0011158,2.23e-07,1;UBERON:0003128,2.23e-07,1;UBERON:0001703,2.23e-07,1;UBERON:0002241,2.23e-07,1;UBERON:0004761,2.23e-07,1;UBERON:0009617,2.23e-07,1;UBERON:0001874,4.06e-07,1;UBERON:0000941,5.78e-07,1;UBERON:0001785,5.78e-07,1;UBERON:0002464,5.78e-07,1;UBERON:0004904,5.78e-07,1;UBERON:0001021,5.78e-07,1;UBERON:0003902,5.78e-07,1;UBERON:0005425,5.78e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0,0,0.757301322732344,0.184099797284599,0.161646056818812,1.06502877754984,0.201504196455281,0,0,0,0,0.243947412259191,0.530119073285941,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.502548796003046,3.82763250991898,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.585707074963566,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0.290012154876366,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,1.1253553312841,0,0,2.53350489753592,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.39152147242777,1.99613798001194,0.520855522170466,0,0,0,0,0,1.37897349296586,1.16641845353302,0.694499979733169,0.885741385813839,0.844175070377856,6.10326945268333,2.54332297841817,6.2064999980245,1.09692698576986,0.10893846351899,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0,0,0,0.123563938946503,0,0.337005664903385,0.802577647298789,0.937057782901357,0,0,0,0,0,2.75465485467441,0,0.150323419414493,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0.17472666824203,1.37588825977293,0,0,0,0,0,0.451961481561065,0,0,0.823040347426423,0,0,0.426905989478705,0,0,0.114536596165916,0.171594997861965,0,0,0,0.271808412147228,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0,0.916641696046735,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,2.38568906942791,0.953423842781029,0.160753148465019,0.550157746388935,0.415440338029185,0,0,0.546746009922222,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,3.54427271986794,3.05065662254908,0.876336514945499,0.573409195690071,0.554645257684261,0.0620964029413835,0.553394539744923,0,0,0,0,0.468334905806882,0,0,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.215649622793364,0,0.655257829152084,0,0.425149840203366,0.247871528518004,0,0,0,0,0,0,0.834979926253974,0,2.07524016774297,8.82000366235247,3.52900374710405,0.553258019713743,3.71393984953257,1.42769420259154,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.945526184657525,5.46754669029693,0.826747186004736,0.824405532520789,8.20462213527329,0,0.496211178389294,0.351742488719241,0,1.07140367175657,1.00885116665647,1.21393120847326,0,0,0,0,0.475788130837822,0.920818829879887,0,0,0.078493092850514,2.04250266890802,0,1.82631744101899,0,0,0.214429632529969,1.10609528212909,0.23248285073625,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0.118920090777569,0,0.549702583727146,0,0,0.437119121007915,0,0.245148321753905,0,1.96308467114945,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0.679914901909147,5.67255897442491,0,0,0.462175628631418,0.432626562123789,0.126166424835079,0,0.253397002022874,0,0,0,0,0,0.267964130156178,0.829169439458779,0.724030971033267,0.213233981900981,0.23806443146374,0.0645889098360061,0,0,0.0636471582781649,0.202117188958219,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0,0,0.757301322732344,0.184099797284599,0.161646056818812,1.06502877754984,0.201504196455281,0,0,0,0,0.243947412259191,0.530119073285941,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.502548796003046,3.82763250991898,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0.585707074963566,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0.290012154876366,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,1.1253553312841,0,0,2.53350489753592,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.39152147242777,1.99613798001194,0.520855522170466,0,0,0,0,0,1.37897349296586,1.16641845353302,0.694499979733169,0.885741385813839,0.844175070377856,6.10326945268333,2.54332297841817,6.2064999980245,1.09692698576986,0.10893846351899,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0,0,0,0.123563938946503,0,0.337005664903385,0.802577647298789,0.937057782901357,0,0,0,0,0,2.75465485467441,0,0.150323419414493,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0.17472666824203,1.37588825977293,0,0,0,0,0,0.451961481561065,0,0,0.823040347426423,0,0,0.426905989478705,0,0,0.114536596165916,0.171594997861965,0,0,0,0.271808412147228,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0,0.916641696046735,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,2.38568906942791,0.953423842781029,0.160753148465019,0.550157746388935,0.415440338029185,0,0,0.546746009922222,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,3.54427271986794,3.05065662254908,0.876336514945499,0.573409195690071,0.554645257684261,0.0620964029413835,0.553394539744923,0,0,0,0,0.468334905806882,0,0,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.215649622793364,0,0.655257829152084,0,0.425149840203366,0.247871528518004,0,0,0,0,0,0,0.834979926253974,0,2.07524016774297,8.82000366235247,3.52900374710405,0.553258019713743,3.71393984953257,1.42769420259154,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.945526184657525,5.46754669029693,0.826747186004736,0.824405532520789,8.20462213527329,0,0.496211178389294,0.351742488719241,0,1.07140367175657,1.00885116665647,1.21393120847326,0,0,0,0,0.475788130837822,0.920818829879887,0,0,0.078493092850514,2.04250266890802,0,1.82631744101899,0,0,0.214429632529969,1.10609528212909,0.23248285073625,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0.118920090777569,0,0.549702583727146,0,0,0.437119121007915,0,0.245148321753905,0,1.96308467114945,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0.679914901909147,5.67255897442491,0,0,0.462175628631418,0.432626562123789,0.126166424835079,0,0.253397002022874,0,0,0,0,0,0.267964130156178,0.829169439458779,0.724030971033267,0.213233981900981,0.23806443146374,0.0645889098360061,0,0,0.0636471582781649,0.202117188958219,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr16:29826201..29826227,+ | |||
}} | }} |
Latest revision as of 07:55, 25 July 2015
Short description: | p@chr16:29826201..29826227, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:29826201..29826227, + |
Coexpression cluster: | C1168_cerebellum_amygdala_hippocampus_occipital_medial_parietal_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 6.88e-07 | 1 |