FFCP PHASE1:Hg19::chr16:31489056..31489082,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:31489056..31489082,+
|short_description=p@chr16:31489056..31489082,+
|description=CAGE_peak_at_chr16:31489056..31489082,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:31489056..31489082,+ | |||
|description=CAGE_peak_at_chr16:31489056..31489082,+ | |||
|id=chr16:31489056..31489082,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.10e-12!180;CL:0000057!5.34e-10!75;CL:0000222!2.10e-09!119;CL:0000213!3.59e-08!57;CL:0000215!3.59e-08!57;CL:0000220!7.82e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:1000746;1.65e-07;7!CL:1000612;1.65e-07;7!CL:0002188;5.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,2.98e-07,7;CL:1000612,2.98e-07,7;CL:0000346,4.54e-07,3;CL:1000428,4.54e-07,3;CL:0002559,7.25e-07,5;CL:0002188,8.36e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.65e-07;7!UBERON:0001229;1.65e-07;7!UBERON:0002118;8.00e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004876,3.87e-08,11;UBERON:0000080,1.31e-07,9;UBERON:0002120,1.31e-07,9;UBERON:0004875,1.31e-07,9;UBERON:0005721,1.31e-07,9;UBERON:0005754,1.31e-07,9;UBERON:0007297,1.31e-07,9;UBERON:0010532,2.98e-07,7;UBERON:0000074,2.98e-07,7;UBERON:0001229,2.98e-07,7;UBERON:0001230,2.98e-07,7;UBERON:0003220,2.98e-07,7;UBERON:0005749,2.98e-07,7;UBERON:0004199,2.98e-07,7;UBERON:0004209,2.98e-07,7;UBERON:0004198,2.98e-07,7;UBERON:0000412,4.54e-07,3;UBERON:0001992,4.54e-07,3;UBERON:0002073,7.25e-07,5;UBERON:0005086,7.25e-07,5 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,1.0007329835313,2.23480547213644,1.74467704820074,5.06599756336621,0,0,0,1.39560233594486,0,2.63766978228454,0.495065411840187,0.662794751455832,0,0.602694528023977,0,0.487932798790507,0.369363174230364,1.42800483870977,2.82109249330279,0,0.684372125364421,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,1.44846518960824,0,0.486634870302636,0.189069634328136,0.221729397462564,0.527008714158756,0.196468613246569,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,4.30117297553062,0,0,0,0.275118041940067,0.626984899610432,0,0,0.33472061276467,0.805658634218294,0.760272105718513,2.19655851793353,0,1.62028389576352,0,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0,0.496971951695318,0.506522046658319,0.132409180813219,1.14734648299525,1.41867352879343,1.68203280042692,2.1349799145941,2.96001058100592,0,0.269421344139376,0.326923806226917,0,0.576175924479999,0,0.312160076830321,0,1.04614076386261,0.117434498643765,0.323745888736263,0.140450806702248,0.204154171254893,0.491337269247072,0.103325781175765,0,0,0,5.03032699271367,0.168336113954066,0,0,0.877955241761676,0.30648779579902,0.150238058906597,0.113432183160021,3.04962380671065,0,0.423863802319124,1.20036438433761,0.309157587715317,3.60696756063881,0.18611685633159,0,0.0974370051611986,1.51460264546469,0,0,0.710019185033229,0.302256294682921,0.169560592310488,0,0,0,0,0,0.348581828608555,0.10366105501537,0.252320850875628,0,1.56449532329816,1.92972281457866,2.76269842704961,1.39310378409594,0,0,0,0,0.330881918197182,0.217879444092406,0,0.134831308160164,0,0,0.738155454624648,2.80483547606892,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.201057944823262,0,0,1.03993478527958,0,0,0,0.433099343283221,0.462985512576611,0.951270761172991,0,0,0,0,0,0,0,0,0,0.290633938513962,1.15014803749563,0,0.088048434013226,0,0.432359860250884,0,0.063497894292169,0,1.17217447210047,1.71072446022705,0.616964956219941,0.300343057843917,1.14330573052231,0,0,0.1466765716419,0,0,0,0.26593811658487,2.08014873822732,0,2.83698264046557,3.19706614819319,0,0,5.76268235746538,0,0,2.37585561880029,0,0,0.599837947092342,0,0.502257091432126,0,0.958499421966331,1.14861935834114,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,1.91381625495949,0,0,0,0.36807447515742,7.00238729483548,0.542530047399471,4.99130067673937,5.17444067511769,3.6271555457805,0.35142424497814,0.300946099727719,0,3.10419213877515,0,0.737476674166813,1.21637060255316,0,1.37257369524342,0,0,0,0,0,2.11673205330776,0,0,0.841980283299221,0.256278298511402,0,0.804269605718038,1.48418066444991,0.771048469013278,1.59805552781814,0.0821271560138091,1.03850885836724,0.348631135379878,0,0.200506470303285,0.368323955743585,0.34444334449382,0.364182336013434,1.44236856455367,0.451199612907412,0,0,1.46139224653261,0,2.27466768141793,1.02056223165909,0.215915916102139,6.16909010761157,0.270946437543853,2.00675909541941,0,0,0.895499018888713,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.580024309752732,0.616194468458578,0.460511024178389,0.413509717453592,0.751941714077915,0.580066775656914,0.681813019328807,0.267096106940212,0,0,0.127612712494584,0.10115778085555,2.78907329578371,1.25924938732256,0,0,0,0,0,0.143124886741991,0,0,0.571890581771475,0,0,0,0.78494864019923,0.359744915166629,0.823611089208164,0.824686816419805,0,0,0,0.48763373908959,0,2.11300293513511,0.136499911407986,0.848432591722276,0,0.551365343546124,0,0.438450885253763,0,3.27947376023316,0,1.54911749049875,0.845086807596724,0.286822704408103,0,0,0,1.05553817648832,0.658589785919804,0,2.44954304171488,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,3.36942951335251,1.7737206141467,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,1.9924798825107,0.552567831062295,0,0,0,0.311039587661807,0,0,0,0.591860433821602,0,0,0,0,0,0,0,1.44999915086959,0.227586896570999,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,0,1.83309043480088,0,0,0,0,0,0.234264445725339,0,0,0,1.57833761139756,1.20990716048664,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.873633341210151,0,0.19351266257817,0,0,0.484945082442097,0,0.451961481561065,1.23337732182076,0,0,0,0,0.85381197895741,0.39961921916426,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0.429226048136571,0,0.201550417460179,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,1.42939065274673,0,0,0,0,1.30634944043764,0,0,0.681552087141687,0.453248366080503,0,0,0,0,0,0.704815022316672,0,0.157204305099666,0.414239055347196,0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| ||
|short_description=p@chr16:31489056..31489082,+ | |||
}} | }} |
Latest revision as of 08:32, 25 July 2015
Short description: | p@chr16:31489056..31489082, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:31489056..31489082, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 2.98e-07 | 7 |
kidney corpuscule cell | 2.98e-07 | 7 |
hair follicle dermal papilla cell | 4.54e-07 | 3 |
stem cell of epidermis | 4.54e-07 | 3 |
hair follicle cell | 7.25e-07 | 5 |
glomerular endothelial cell | 8.36e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
urogenital ridge | 3.87e-08 | 11 |
mesonephros | 1.31e-07 | 9 |
pronephros | 1.31e-07 | 9 |
nephrogenic cord | 1.31e-07 | 9 |
pronephric mesoderm | 1.31e-07 | 9 |
rostral part of nephrogenic cord | 1.31e-07 | 9 |
presumptive pronephric mesoderm | 1.31e-07 | 9 |
primitive nephron | 2.98e-07 | 7 |
renal glomerulus | 2.98e-07 | 7 |
renal corpuscle | 2.98e-07 | 7 |
glomerular capsule | 2.98e-07 | 7 |
metanephric mesenchyme | 2.98e-07 | 7 |
glomerular tuft | 2.98e-07 | 7 |
S-shaped body | 2.98e-07 | 7 |
renal vesicle | 2.98e-07 | 7 |
comma-shaped body | 2.98e-07 | 7 |
dermal papilla | 4.54e-07 | 3 |
papillary layer of dermis | 4.54e-07 | 3 |
hair follicle | 7.25e-07 | 5 |
hair follicle placode | 7.25e-07 | 5 |