FFCP PHASE1:Hg19::chr17:29248955..29248978,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:29248955..29248978,+
|short_description=p1@ADAP2
|description=CAGE_peak_1_at_ADAP2_5end
|association_with_transcript=201bp_to_NM_018404,uc002hfx.2,uc002hf...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55803 | |EntrezGene=55803 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16487 | |HGNC=16487 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPF8 | |UniProt=Q9NPF8 | ||
|association_with_transcript=201bp_to_NM_018404,uc002hfx.2,uc002hfy.2,uc010csk.2,uc010csl.2_5end | |||
|cluster_id=chr17:29248955..29248978,+ | |||
|coexpression_cluster_id=C294 | |||
|description=CAGE_peak_1_at_ADAP2_5end | |||
|id=chr17:29248955..29248978,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.68e-29!65;CL:0002194!8.82e-29!63;CL:0000576!8.82e-29!63;CL:0000040!8.82e-29!63;CL:0000559!8.82e-29!63;CL:0002057!4.70e-28!42;CL:0000557!4.05e-26!71;CL:0000839!1.42e-24!70;CL:0000860!1.83e-24!45;CL:0000766!8.68e-24!76;CL:0002087!1.50e-13!119;CL:0000738!2.44e-13!140;CL:0000763!9.22e-12!112;CL:0000049!9.22e-12!112;CL:0002031!1.39e-11!124;CL:0002393!5.39e-08!9;CL:0002397!5.39e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.24e-27;39!CL:0000234;2.24e-27;39!CL:0000860;3.41e-26;33!CL:0002057;3.41e-26;33!CL:0000576;3.83e-24;48!CL:0000766;2.37e-16;69!CL:0000235;7.56e-08;6!CL:0002393;2.46e-07;6!CL:0002397;2.46e-07;6!CL:0000990;6.64e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.27e-44,48;CL:0000234,4.27e-44,48;CL:0002009,6.48e-44,61;CL:0002194,5.80e-43,59;CL:0000576,5.80e-43,59;CL:0000040,5.80e-43,59;CL:0000559,5.80e-43,59;CL:0000557,8.49e-38,67;CL:0000860,1.41e-37,42;CL:0002057,1.41e-37,42;CL:0000839,6.73e-36,66;CL:0000766,1.90e-35,72;CL:0000763,1.41e-21,108;CL:0000049,1.41e-21,108;CL:0002087,3.69e-19,115;CL:0000738,6.66e-19,136;CL:0002031,2.45e-16,120;CL:0000037,2.67e-11,168;CL:0002032,5.89e-11,161;CL:0000837,5.89e-11,161;CL:0000988,1.95e-10,177;CL:0002393,2.68e-10,9;CL:0002397,2.68e-10,9;CL:0000235,7.62e-08,6;CL:0000990,7.88e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.40e-27;42!CL:0000049;4.18e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.85e-34!115;UBERON:0002390!8.61e-23!102;UBERON:0003061!8.61e-23!102;UBERON:0000062!2.03e-21!511;UBERON:0002371!6.86e-21!80;UBERON:0002193!2.01e-19!112;UBERON:0001474!5.95e-18!86;UBERON:0002405!6.24e-17!115;UBERON:0000922!2.11e-14!612;UBERON:0002050!1.17e-13!605;UBERON:0005423!1.17e-13!605;UBERON:0004765!1.96e-13!101;UBERON:0001434!1.96e-13!101;UBERON:0000923!2.45e-13!604;UBERON:0005291!2.45e-13!604;UBERON:0006598!2.45e-13!604;UBERON:0002532!2.45e-13!604;UBERON:0000467!2.90e-13!625;UBERON:0000480!4.51e-13!626;UBERON:0000468!1.07e-10!659;UBERON:0001049!1.65e-09!57;UBERON:0005068!1.65e-09!57;UBERON:0006241!1.65e-09!57;UBERON:0007135!1.65e-09!57;UBERON:0001017!1.02e-07!82;UBERON:0005743!1.50e-07!86;UBERON:0002616!2.05e-07!59;UBERON:0003080!2.16e-07!42;UBERON:0000955!2.21e-07!69;UBERON:0006238!2.21e-07!69;UBERON:0002780!6.38e-07!41;UBERON:0001890!6.38e-07!41;UBERON:0006240!6.38e-07!41;UBERON:0000926!8.05e-07!448;UBERON:0004120!8.05e-07!448;UBERON:0006603!8.05e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.36e-09;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.12e-36,114;UBERON:0002390,3.76e-36,98;UBERON:0003061,3.76e-36,98;UBERON:0002193,1.17e-32,108;UBERON:0002371,3.77e-32,76;UBERON:0002405,5.02e-29,93;UBERON:0001474,4.60e-28,82;UBERON:0004765,1.59e-23,90;UBERON:0001434,1.03e-19,100;UBERON:0003081,2.87e-12,203;UBERON:0005423,1.27e-11,581;UBERON:0000922,1.31e-11,592;UBERON:0000923,1.20e-08,560;UBERON:0010316,1.20e-08,560;UBERON:0005291,1.20e-08,560;UBERON:0006598,1.20e-08,560;UBERON:0010317,1.20e-08,560;UBERON:0002532,1.20e-08,560;UBERON:0002050,1.28e-08,564;UBERON:0001049,4.15e-08,56;UBERON:0005068,4.15e-08,56;UBERON:0006241,4.15e-08,56;UBERON:0007135,4.15e-08,56;UBERON:0002204,4.10e-07,167;UBERON:0000073,5.65e-07,53;UBERON:0002616,5.65e-07,53 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.982935746006035,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,7.47392126012918,2.68680578668049,7.7408061658038,0,0.30120591877825,0.739508020333575,0,0,0,16.0658668474244,15.8430113501412,13.8886957258145,56.202784034221,37.8955589242206,61.0454095293022,19.3379657576821,10.2026504795979,18.6789727114618,13.9457422143411,5.75635043230556,5.26500830521676,9.78154133895312,7.94098190240212,9.45928919554341,11.721353145045,10.973239620925,16.251178391321,11.8592673911841,5.18521685109907,6.74170453335254,9.18251677112708,4.49300637906531,6.39337125799041,7.58657990429447,11.9678194572979,11.9342930149154,9.57690487474327,6.24123747160254,3.11411124497787,9.2962006144995,13.5585558789252,7.8187984093842,7.26479403160043,4.05105399586321,7.59509729858123,17.7454440502031,17.0083439972035,21.5948404873627,13.5917643687259,13.3657434628941,13.6616748692518,19.9508920618874,20.6873344287054,19.1797361452866,1.75996244461323,1.09227722252426,2.66852776159066,0.426730222566507,0.400395987036012,0,1.32208974556972,1.90810750907073,0.569212969109448,1.17447437874188,0,0,0,0.526768169550154,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.383959833463255,0,1.18388626022008,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,5.04269440666194,2.18577172975525,2.59549109949101,20.1219384065904,20.5473090013135,18.74707243316,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.788280363383256,0,0,0.183201743930407,0,0,3.05265836499774,0.496971951695318,0,0.132409180813219,0,1.41867352879343,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0.286804595389004,0.121973706129595,0.132529768321485,0.348581828608555,0.207322110030741,0,0.72995471815166,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,0.738155454624648,0,0,0,1.26755034821831,4.91413608338813,6.49868897349544,0,0.491953754172454,0,0.768251997860379,2.24803506515239,0.301586917234893,0.462942225792648,0,0,0,0,0,0,0,0,0.790204397959275,0,89.1305562036378,29.9525459378224,58.4120467794702,0.93733833986777,0.16798212819886,0.425325291727159,0,0,0,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0,0.43596006883328,0.07333828582095,0,0,0.845302752556,0.26593811658487,1.04007436911366,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0.099972991182057,38.919609805181,80.3611346291402,37.9501091069457,0,0,0,0,0,0.179060963239896,0,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,1.17261385734044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,5.37596867919507,6.25571182373989,4.26910231213777,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0.177561725313127,0,0.519254429183621,0,0.241718899183244,0,1.47329582297434,0.459257792658427,0.728364672026868,0.917870904715969,1.80479845162965,2.0794141018192,3.13739907670742,1.46139224653261,1.05551628892876,0,0.170093705276516,0.215915916102139,0,1.89662506280697,1.50506932156456,3.05851527654046,1.66215201785745,0.895499018888713,0,0,0,0,0.650756789328606,6.80070676874967,0,0,1.14853107599234,7.15066270640173,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.826424576804891,0.192190067365106,0.127612712494584,2.4277867405332,0,0,0,0,0.532306030317022,0,0,0,0.372158369359667,0.632758849437452,0,0.767693373934002,0,0,0,0.719489830333259,0.274537029736055,0.589062011728432,0,0,0,2.92580243453754,0,0,0.9554993798559,0.141405431953713,0,0,0,0,0,0,0,1.239293992399,0,0.143411352204052,0,0,0.354761064070598,0.211107635297664,0,0,0,0.288666338176536,0.670302275535787,0,6.96664125748166,0,0,2.21715076768338,0.459446800413919,1.52234282769651,3.0585488285695,2.84823593587081,2.1440859791201,3.29089818468955,1.29694662238543,3.7802200606668,0,0.747768497892312,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,2.98092366383228,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,7.61842532213849,0.242721043499027,0,1.13654458722565,0.47748896947538,0.890894042497916,0,1.9882952955326,4.07941307590487,0,0,0,6.97367958878744,5.8019622261541,0,0.102268682502155,0.123084805461069,0,0.449341755736634,0,0,2.56472854656027,9.57932369387759,0,0.969332746095218,0.834912883456661,1.99613798001194,0,0.0874599999961957,12.3249927823915,0.227586896570999,0,1.65471377237555,0,0,0.173624994933292,0.885741385813839,2.65312164975897,1.52581736317083,1.10579259931225,1.77328571372128,1.53569778007781,0,0.278847488557207,3.23191085715948,0,21.2118792037015,1.25660702173681,7.06207917493052,0.957003479195758,0.457987967009312,1.5991043280559,0,0,0.166211681900156,0,0,0,0,0,0.421996129056054,1.30586246527318,0.848118428603645,0,3.98104772431402,4.95362361218699,4.888241159469,0,0,0,3.10045211711114,7.2231988256891,1.17132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| ||
|short_description=p1@ADAP2 | |||
}} | }} |
Latest revision as of 10:37, 19 September 2015
Short description: | p1@ADAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADAP2_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | 201bp_to_NM_018404, uc002hfx.2, uc002hfy.2, uc010csk.2, uc010csl.2_5end |
EntrezGene: | ADAP2 |
HGNC: | 16487 |
UniProt: | Q9NPF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.27e-44 | 48 |
phagocyte | 4.27e-44 | 48 |
macrophage dendritic cell progenitor | 6.48e-44 | 61 |
monopoietic cell | 5.80e-43 | 59 |
monocyte | 5.80e-43 | 59 |
monoblast | 5.80e-43 | 59 |
promonocyte | 5.80e-43 | 59 |
granulocyte monocyte progenitor cell | 8.49e-38 | 67 |
classical monocyte | 1.41e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.41e-37 | 42 |
myeloid lineage restricted progenitor cell | 6.73e-36 | 66 |
myeloid leukocyte | 1.90e-35 | 72 |
myeloid cell | 1.41e-21 | 108 |
common myeloid progenitor | 1.41e-21 | 108 |
nongranular leukocyte | 3.69e-19 | 115 |
leukocyte | 6.66e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 2.45e-16 | 120 |
hematopoietic stem cell | 2.67e-11 | 168 |
hematopoietic oligopotent progenitor cell | 5.89e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.89e-11 | 161 |
hematopoietic cell | 1.95e-10 | 177 |
intermediate monocyte | 2.68e-10 | 9 |
CD14-positive, CD16-positive monocyte | 2.68e-10 | 9 |
macrophage | 7.62e-08 | 6 |
conventional dendritic cell | 7.88e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.12e-36 | 114 |
hematopoietic system | 3.76e-36 | 98 |
blood island | 3.76e-36 | 98 |
hemolymphoid system | 1.17e-32 | 108 |
bone marrow | 3.77e-32 | 76 |
immune system | 5.02e-29 | 93 |
bone element | 4.60e-28 | 82 |
skeletal element | 1.59e-23 | 90 |
skeletal system | 1.03e-19 | 100 |
lateral plate mesoderm | 2.87e-12 | 203 |
developing anatomical structure | 1.27e-11 | 581 |
embryo | 1.31e-11 | 592 |
germ layer | 1.20e-08 | 560 |
germ layer / neural crest | 1.20e-08 | 560 |
embryonic tissue | 1.20e-08 | 560 |
presumptive structure | 1.20e-08 | 560 |
germ layer / neural crest derived structure | 1.20e-08 | 560 |
epiblast (generic) | 1.20e-08 | 560 |
embryonic structure | 1.28e-08 | 564 |
neural tube | 4.15e-08 | 56 |
neural rod | 4.15e-08 | 56 |
future spinal cord | 4.15e-08 | 56 |
neural keel | 4.15e-08 | 56 |
musculoskeletal system | 4.10e-07 | 167 |
regional part of nervous system | 5.65e-07 | 53 |
regional part of brain | 5.65e-07 | 53 |