FFCP PHASE1:Hg19::chr18:3449618..3449634,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7050 | |EntrezGene=7050 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11776 | |HGNC=11776 | ||
|TSSclassifier=strong | |||
|UniProt=A6NE42 | |UniProt=A6NE42 | ||
|association_with_transcript=12bp_to_ENST00000405385_5end | |association_with_transcript=12bp_to_ENST00000405385_5end | ||
|cluster_id=chr18:3449618..3449634,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_13_at_TGIF1_5end | |description=CAGE_peak_13_at_TGIF1_5end | ||
|id=chr18:3449618..3449634,+ | |id=chr18:3449618..3449634,+ | ||
|ontology_enrichment_celltype=CL:0000860!3.42e-28!45;CL:0002057!8.84e-28!42;CL:0002194!6.86e-26!63;CL:0000576!6.86e-26!63;CL:0000040!6.86e-26!63;CL:0000559!6.86e-26!63;CL:0000766!1.34e-25!76;CL:0000557!3.38e-25!71;CL:0002009!4.16e-25!65;CL:0000839!6.91e-25!70;CL:0000763!3.52e-19!112;CL:0000049!3.52e-19!112;CL:0000063!9.53e-16!578;CL:0000012!9.34e-14!682;CL:0000548!1.30e-12!679;CL:0000004!1.30e-12!679;CL:0000255!1.30e-12!679;CL:0000134!1.61e-12!358;CL:0002320!1.61e-11!365;CL:0000219!2.62e-11!390;CL:0000738!3.46e-11!140;CL:0002087!4.81e-11!119;CL:0000003!5.92e-11!722;CL:0000034!2.68e-10!444;CL:0002031!3.61e-10!124;CL:0000723!6.91e-10!436;CL:0002032!1.20e-09!165;CL:0000837!1.20e-09!165;CL:0000037!1.28e-09!172;CL:0000566!1.28e-09!172;CL:0000048!1.47e-09!430;CL:0000144!4.49e-09!625;CL:0000988!9.73e-09!182 | |ontology_enrichment_celltype=CL:0000860!3.42e-28!45;CL:0002057!8.84e-28!42;CL:0002194!6.86e-26!63;CL:0000576!6.86e-26!63;CL:0000040!6.86e-26!63;CL:0000559!6.86e-26!63;CL:0000766!1.34e-25!76;CL:0000557!3.38e-25!71;CL:0002009!4.16e-25!65;CL:0000839!6.91e-25!70;CL:0000763!3.52e-19!112;CL:0000049!3.52e-19!112;CL:0000063!9.53e-16!578;CL:0000012!9.34e-14!682;CL:0000548!1.30e-12!679;CL:0000004!1.30e-12!679;CL:0000255!1.30e-12!679;CL:0000134!1.61e-12!358;CL:0002320!1.61e-11!365;CL:0000219!2.62e-11!390;CL:0000738!3.46e-11!140;CL:0002087!4.81e-11!119;CL:0000003!5.92e-11!722;CL:0000034!2.68e-10!444;CL:0002031!3.61e-10!124;CL:0000723!6.91e-10!436;CL:0002032!1.20e-09!165;CL:0000837!1.20e-09!165;CL:0000037!1.28e-09!172;CL:0000566!1.28e-09!172;CL:0000048!1.47e-09!430;CL:0000144!4.49e-09!625;CL:0000988!9.73e-09!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.26e-51;33!CL:0002057;3.26e-51;33!CL:0000473;1.76e-38;39!CL:0000234;1.76e-38;39!CL:0000576;5.91e-35;48!CL:0000766;9.37e-24;69!CL:0000763;8.06e-13;100!CL:0002393;4.25e-10;6!CL:0002397;4.25e-10;6!CL:0002087;1.30e-09;104!CL:0000738;3.75e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.53e-66,42;CL:0002057,3.53e-66,42;CL:0000473,4.21e-62,48;CL:0000234,4.21e-62,48;CL:0000766,1.10e-52,72;CL:0002194,3.04e-51,59;CL:0000576,3.04e-51,59;CL:0000040,3.04e-51,59;CL:0000559,3.04e-51,59;CL:0002009,4.20e-49,61;CL:0000557,1.60e-47,67;CL:0000839,2.48e-46,66;CL:0000763,9.88e-36,108;CL:0000049,9.88e-36,108;CL:0000738,2.53e-27,136;CL:0002087,1.20e-26,115;CL:0002031,1.58e-23,120;CL:0000037,7.78e-23,168;CL:0002032,2.07e-22,161;CL:0000837,2.07e-22,161;CL:0000988,8.55e-21,177;CL:0000134,8.29e-14,354;CL:0002320,3.99e-13,361;CL:0000219,5.08e-13,386;CL:0000034,1.62e-12,441;CL:0000723,5.23e-12,433;CL:0000048,6.82e-12,427;CL:0002393,2.76e-11,9;CL:0002397,2.76e-11,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.96e-48;42!CL:0000049;7.28e-12;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.97e-21!80;UBERON:0001474!2.38e-19!86;UBERON:0002390!2.29e-17!102;UBERON:0003061!2.29e-17!102;UBERON:0004765!2.48e-17!101;UBERON:0001434!2.48e-17!101;UBERON:0002193!7.80e-15!112;UBERON:0002405!1.38e-11!115;UBERON:0002384!7.44e-11!375;UBERON:0002204!7.09e-09!167;UBERON:0003081!1.05e-07!216 | |ontology_enrichment_uberon=UBERON:0002371!3.97e-21!80;UBERON:0001474!2.38e-19!86;UBERON:0002390!2.29e-17!102;UBERON:0003061!2.29e-17!102;UBERON:0004765!2.48e-17!101;UBERON:0001434!2.48e-17!101;UBERON:0002193!7.80e-15!112;UBERON:0002405!1.38e-11!115;UBERON:0002384!7.44e-11!375;UBERON:0002204!7.09e-09!167;UBERON:0003081!1.05e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.63e-40,76;UBERON:0001474,8.83e-38,82;UBERON:0004765,4.12e-33,90;UBERON:0002390,1.52e-32,98;UBERON:0003061,1.52e-32,98;UBERON:0002405,3.54e-30,93;UBERON:0001434,1.22e-29,100;UBERON:0002193,3.99e-28,108;UBERON:0002204,1.10e-18,167;UBERON:0003081,1.17e-16,203;UBERON:0002384,3.35e-12,371;UBERON:0000926,1.15e-11,315;UBERON:0004120,1.15e-11,315;UBERON:0006603,1.15e-11,315 | |||
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|phase1_expression=1.63510541343501,0.428201047781966,2.53717927372748,2.00146596706261,0,0.872338524100369,2.53299878168311,0,0,0.245733936501509,0,0.218441372130172,0,0.37129905888014,0,1.34465029290355,1.20538905604795,0.730310090387373,0,0.123121058076788,0.408001382488506,0,0,0,0.125542639594803,0.0764134057479513,0,0,2.75354993794233,1.53531759238885,2.47705797305722,0,0.30120591877825,0.369754010166788,0.0774672005803016,0,0.293600439334847,3.32397245119126,3.40925560699241,1.51907609501096,0.895661896959697,0.32389366601898,0.77272670290256,11.6318591023652,15.87078963493,9.70336244751265,16.0376035464922,15.2132118568076,25.0862160425034,18.9876978932619,19.9805351092698,18.6820961611982,18.2715210790408,23.8829332926016,14.8969135253776,16.7535682192918,18.0118059038178,15.0564734578207,21.1197885735923,21.8231738411744,19.8194508997703,8.90598510504134,10.5715738539465,12.7867425159808,17.412554317715,20.9932533135722,16.1933784738849,18.8436498942557,18.251902144707,23.0220175387424,12.1079900526674,18.7821594353658,17.0889689218078,1.26753171787165,1.91343869968539,2.30624510059213,2.69588714751588,1.65194582125657,0.64290234678832,2.85012743741249,0.79566670879636,1.0959849225878,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0,0,0.764546456250458,1.32171328579026,2.24203425192614,0.790152254325231,0.196709770113833,0.393010762749165,0.822405995998037,0,0.32592226663359,1.4203434172042,0,0,0.589211814949674,0,0.270803863765016,0,0,0.328875809207352,0,0,0.14828656316206,0.267540828089713,0,0.226618685395132,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0.651083453856419,0,0.150575119077773,0.383959833463255,0,0,0,1.61285394579786,0.534880391567015,1.30341963494519,0,0,0.12786256184353,0.722878304769133,0.50133791063589,0.724232594804119,1.5905718941022,1.94653948121054,0,0,0.087834785693126,0.130979075497713,0,0.370784442784429,0.649094787309367,1.21890816109487,1.19662164466979,0.238490624305342,0,0,0,0.860234595106124,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0.760272105718513,0.732186172644509,0,0,0,0,0.112611480483322,0,0,0,2.63560834872127,3.87780264148325,0,0.496971951695318,0.379891534993739,0.794455084879313,0.860509862246441,0.354668382198357,0,0,0.98667019366864,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0.70296429550139,0.936480230490962,0.570471821544449,0.448346041655403,0.23486899728753,0.485618833104395,0.280901613404497,0.408308342509787,0.122834317311768,0.619954687054593,1.18800285728205,0.741800787835671,0,0.718618141816238,0.168336113954066,0,0.277064115484183,0.877955241761676,0.612975591598039,0.751190294532984,0.226864366320042,0.717558542755448,0.213557388818567,0.211931901159562,1.50045548042201,0.412210116953756,0.515281080091258,0.558350568994769,0.506328996723799,0.0974370051611986,0.504867548488229,0.920498986422993,0.484938170456436,0.710019185033229,0.302256294682921,0.339121184620975,0.193260853163297,0.272746120590835,0,0.121973706129595,0.265059536642971,0,0.518305275076852,0,0.36497735907583,0,0,1.38134921352481,0,0.721879481669586,0.236613600079688,1.01150814046861,0.723033089650446,0.55146986366197,1.30727666455444,1.18635309555548,0.674156540800822,0.196221465125346,0.769494313892781,0,2.80483547606892,0,0,0,0,0.590789906681404,0,0,0,0.439001141634502,2.24803506515239,0.201057944823262,0.555530670951178,1.3032332212413,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0.570762456703795,0.790204397959275,1.71697232418975,1.47730203652438,0.936017060556951,0.743155811443641,0,0.16798212819886,0.425325291727159,0.0895585227028483,0.290633938513962,0.383382679165211,0.985326475791887,0,0.621984346622316,1.15295962733569,0.12624243342638,0.63497894292169,0,1.17217447210047,1.71072446022705,1.54241239054985,0.600686115687835,0.857479297891735,0.336393253036082,0.43596006883328,0.22001485746285,1.03417372606222,0,0,0.26593811658487,0,0,0,0.266422179016099,0.285955987316295,1.62786481617433,0,0,0,0,0.301439377059586,0.871533458600294,0.199945982364114,0,0.502257091432126,2.10833939483032,0,0,0,0.579125226670317,0.61642896765115,0.179060963239896,0,0.985153801009636,1.07813787429759,1.28343036279748,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0,0.630809660135739,0.702848489956279,0.300946099727719,0,0,0,0.368738337083406,0.0868836144680828,0.195801157462741,0,0.82707210449155,1.72571360654893,1.81436848265855,0.606255142892519,0,0,0.248107807818777,0.920771839728375,0.561320188866147,1.53766979106841,0,0.965123526861645,1.48418066444991,0.308419387605311,0.177561725313127,0.164254312027618,0,0.348631135379878,0,0.40101294060657,1.93370076765382,0.803701137152247,0.910455840033585,0.262248829918848,0.902399225814824,0.539107359730903,1.56869953835371,0,0.633309773357254,0,0.170093705276516,0.431831832204279,0,0,0.501689773854853,0.509752546090077,1.66215201785745,0.223874754722178,0.219259876645935,0.261435451024901,0.256450125116389,0.984043937099117,0.325378394664303,0.10304101164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| ||
|short_description=p13@TGIF1 | |short_description=p13@TGIF1 | ||
}} | }} |
Latest revision as of 10:13, 19 September 2015
Short description: | p13@TGIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TGIF1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 12bp_to_ENST00000405385_5end |
EntrezGene: | TGIF1 |
HGNC: | 11776 |
UniProt: | A6NE42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.53e-66 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.53e-66 | 42 |
defensive cell | 4.21e-62 | 48 |
phagocyte | 4.21e-62 | 48 |
myeloid leukocyte | 1.10e-52 | 72 |
monopoietic cell | 3.04e-51 | 59 |
monocyte | 3.04e-51 | 59 |
monoblast | 3.04e-51 | 59 |
promonocyte | 3.04e-51 | 59 |
macrophage dendritic cell progenitor | 4.20e-49 | 61 |
granulocyte monocyte progenitor cell | 1.60e-47 | 67 |
myeloid lineage restricted progenitor cell | 2.48e-46 | 66 |
myeloid cell | 9.88e-36 | 108 |
common myeloid progenitor | 9.88e-36 | 108 |
leukocyte | 2.53e-27 | 136 |
nongranular leukocyte | 1.20e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 1.58e-23 | 120 |
hematopoietic stem cell | 7.78e-23 | 168 |
hematopoietic oligopotent progenitor cell | 2.07e-22 | 161 |
hematopoietic multipotent progenitor cell | 2.07e-22 | 161 |
hematopoietic cell | 8.55e-21 | 177 |
mesenchymal cell | 8.29e-14 | 354 |
connective tissue cell | 3.99e-13 | 361 |
motile cell | 5.08e-13 | 386 |
stem cell | 1.62e-12 | 441 |
somatic stem cell | 5.23e-12 | 433 |
multi fate stem cell | 6.82e-12 | 427 |
intermediate monocyte | 2.76e-11 | 9 |
CD14-positive, CD16-positive monocyte | 2.76e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.63e-40 | 76 |
bone element | 8.83e-38 | 82 |
skeletal element | 4.12e-33 | 90 |
hematopoietic system | 1.52e-32 | 98 |
blood island | 1.52e-32 | 98 |
immune system | 3.54e-30 | 93 |
skeletal system | 1.22e-29 | 100 |
hemolymphoid system | 3.99e-28 | 108 |
musculoskeletal system | 1.10e-18 | 167 |
lateral plate mesoderm | 1.17e-16 | 203 |
connective tissue | 3.35e-12 | 371 |
mesoderm | 1.15e-11 | 315 |
mesoderm-derived structure | 1.15e-11 | 315 |
presumptive mesoderm | 1.15e-11 | 315 |