FFCP PHASE1:Hg19::chr17:39928501..39928513,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:39928501..39928513,-
|short_description=p10@JUP
|description=CAGE_peak_10_at_JUP_5end
|association_with_transcript=7bp_to_ENST00000420370_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3728 | |EntrezGene=3728 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6207 | |HGNC=6207 | ||
|TSSclassifier=strong | |||
|UniProt=C9J826 | |UniProt=C9J826 | ||
|association_with_transcript=7bp_to_ENST00000420370_5end | |||
|cluster_id=chr17:39928501..39928513,- | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_10_at_JUP_5end | |||
|id=chr17:39928501..39928513,- | |||
|ontology_enrichment_celltype=CL:0000066!4.10e-24!254;CL:0002076!8.76e-24!43;CL:0000223!5.53e-18!59;CL:0002251!9.10e-13!21;CL:0002368!2.63e-09!13;CL:0002202!3.60e-09!9;CL:0002632!3.60e-09!9;CL:0002159!4.04e-08!13;CL:0000349!4.69e-07!3;CL:0002577!4.69e-07!3;CL:0000076!6.49e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002577;2.72e-18;3!CL:0000349;5.18e-14;19!CL:0000575;1.52e-12;2!CL:0002537;7.27e-11;5!CL:0002252;2.67e-07;1!CL:0002159;7.45e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.56e-18,3;CL:0000349,4.94e-14,19;CL:0000575,7.54e-13,2;CL:0002537,7.29e-11,5;CL:0002252,3.20e-07,1;CL:0000066,3.58e-07,253;CL:0002159,6.09e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.67e-07;1!UBERON:0008425;6.48e-07;1 | |||
|ontology_enrichment_disease=DOID:1749!2.83e-15!14;DOID:305!9.08e-13!106;DOID:299!4.05e-09!25;DOID:5093!2.21e-08!4;DOID:1612!2.21e-08!4;DOID:0050687!3.56e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.88e-13;4!DOID:1612;1.88e-13;4!DOID:3151;2.67e-07;1!DOID:3149;2.67e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.73e-13,4;DOID:1612,1.73e-13,4;DOID:3151,2.52e-07,1;DOID:3149,2.52e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.85e-18!169;UBERON:0000925!4.85e-18!169;UBERON:0006595!4.85e-18!169;UBERON:0001007!1.21e-12!155;UBERON:0001555!1.21e-12!155;UBERON:0007026!1.21e-12!155;UBERON:0000077!1.44e-12!130;UBERON:0005911!4.60e-12!82;UBERON:0000344!6.04e-10!12;UBERON:0005631!1.35e-09!14;UBERON:0000158!1.35e-09!14;UBERON:0004921!2.37e-09!129;UBERON:0004185!2.37e-09!129;UBERON:0001004!6.89e-09!72;UBERON:0002294!3.39e-08!7;UBERON:0001173!3.39e-08!7;UBERON:0004912!3.39e-08!7;UBERON:0003729!3.49e-08!5;UBERON:0001987!3.62e-08!4;UBERON:0004340!3.62e-08!4;UBERON:0005153!4.52e-08!37;UBERON:0000065!1.20e-07!53;UBERON:0000072!1.29e-07!46;UBERON:0000161!2.01e-07!35;UBERON:0004807!2.43e-07!28;UBERON:0000974!4.22e-07!10;UBERON:0005178!4.85e-07!34;UBERON:0002224!4.85e-07!34;UBERON:0001041!5.15e-07!98;UBERON:0003343!5.32e-07!4;UBERON:0004785!5.32e-07!4;UBERON:0007196!5.74e-07!14;UBERON:0001558!5.74e-07!14;UBERON:0000915!9.24e-07!52;UBERON:0005181!9.61e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;7.42e-14;4!UBERON:0000305;3.37e-13;7!UBERON:0000478;6.54e-11;24!UBERON:0005631;2.80e-09;10!UBERON:0000158;2.80e-09;10!UBERON:0001043;6.65e-09;3!UBERON:0001723;9.25e-09;3!UBERON:0001033;9.25e-09;3!UBERON:0002372;6.48e-07;1!UBERON:0005795;6.48e-07;1!UBERON:0000997;6.48e-07;1!UBERON:0005056;6.48e-07;1!UBERON:0001961;6.48e-07;1!UBERON:0001744;6.48e-07;1!UBERON:0004176;6.48e-07;1!UBERON:0001042;6.48e-07;1!UBERON:0001735;6.48e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.38e-19,14;UBERON:0000158,2.38e-19,14;UBERON:0001987,4.91e-14,4;UBERON:0004340,4.91e-14,4;UBERON:0000305,4.23e-13,7;UBERON:0004871,1.75e-11,8;UBERON:0000478,6.30e-11,24;UBERON:0001043,6.16e-09,3;UBERON:0009143,6.16e-09,3;UBERON:0001723,9.09e-09,3;UBERON:0001033,9.09e-09,3;UBERON:0010056,9.09e-09,3;UBERON:0003124,3.23e-08,7;UBERON:0000997,5.78e-07,1;UBERON:0005056,5.78e-07,1;UBERON:0004923,6.92e-07,66;UBERON:0000964,7.75e-07,4;UBERON:0010409,7.75e-07,4;UBERON:0004348,7.75e-07,4;UBERON:0005427,7.75e-07,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,0,1.09220686065086,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0,0.919421224478927,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,2.5500670180478,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,2.18047026071267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0.573609190778008,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,1.22988438543114,0,2.41450627898976,2.24803506515239,0.603173834469785,0.185176890317059,0,0,0,0,0,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0,0,0.283550194484773,0.0895585227028483,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42502057157008,3.32870879020994,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0.802025881213139,0.368323955743585,0,0,0,0,0.385076685522074,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,1.08890984861323,0.282431402330337,0,1.68471475667626,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,5.01495229248653,0,1.90995587790152,1.18785872333055,2.15012491469462,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0.179736702294654,0.716084698702437,0,0,0,0,0,0,0,2.08342208868187,1.57427999993152,0,0.910347586283997,0.762760950878299,0.945550727071745,0,0,0,0,0,0,0,0,0,0,5.71637351542273,0.230850775511391,0,0,0.179515288819544,0.651884231532048,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.565412285735763,0,0.995261931078505,0,0,0,0,0,0,0,0,0,1.36965233252463,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0.694238953340524,1.37189356380129,0.609414446062818,0.34945333648406,0,0,0,0,2.61870344518732,0,0,0,0,0,0.586654148204409,0.160317640503067,0.640358984218058,0,1.29681375438695,0,0,0,0,0.471388069233591,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32140586367385,0,2.34804281319486,0.157611414598396,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.839277046316667,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,2.24142474360707,0.733714394086716,0.115525666150338,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0,0.840816489941367,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0.196300467230486,12.4356283481915,0,0,0,0.971421986118279,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71421575442263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534434810531121,0,0,0,0,0,0,0.639701945702943,0,0.193766729508018,0.0620747142958579,0,0.0636471582781649,0,3.48346796635138,1.36893320434112,1.01028079521881,0.286888821570705,0,0.162806537221949,0,0,0,0,0,1.22068853494722,0,0,0 | ||
|short_description=p10@JUP | |||
}} | }} |
Latest revision as of 07:09, 20 September 2015
Short description: | p10@JUP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_JUP_5end |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | 7bp_to_ENST00000420370_5end |
EntrezGene: | JUP |
HGNC: | 6207 |
UniProt: | C9J826 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.56e-18 | 3 |
extraembryonic cell | 4.94e-14 | 19 |
corneal epithelial cell | 7.54e-13 | 2 |
amnion mesenchymal stem cell | 7.29e-11 | 5 |
epithelial cell of esophagus | 3.20e-07 | 1 |
epithelial cell | 3.58e-07 | 253 |
general ecto-epithelial cell | 6.09e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.38e-19 | 14 |
membranous layer | 2.38e-19 | 14 |
placenta | 4.91e-14 | 4 |
allantois | 4.91e-14 | 4 |
amnion | 4.23e-13 | 7 |
somatic layer of lateral plate mesoderm | 1.75e-11 | 8 |
extraembryonic structure | 6.30e-11 | 24 |
esophagus | 6.16e-09 | 3 |
esophageal region | 6.16e-09 | 3 |
tongue | 9.09e-09 | 3 |
gustatory system | 9.09e-09 | 3 |
future tongue | 9.09e-09 | 3 |
chorion | 3.23e-08 | 7 |
mammalian vulva | 5.78e-07 | 1 |
external female genitalia | 5.78e-07 | 1 |
organ component layer | 6.92e-07 | 66 |
cornea | 7.75e-07 | 4 |
eye surface | 7.75e-07 | 4 |
optic eminence | 7.75e-07 | 4 |
corneal primordium | 7.75e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.73e-13 | 4 |
breast cancer | 1.73e-13 | 4 |
skin squamous cell carcinoma | 2.52e-07 | 1 |
keratoacanthoma | 2.52e-07 | 1 |