FFCP PHASE1:Hg19::chr2:85890508..85890534,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6439 | |EntrezGene=6439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10801 | |HGNC=10801 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=66bp_to_ENST00000494165_5end | |association_with_transcript=66bp_to_ENST00000494165_5end | ||
|cluster_id=chr2:85890508..85890534,- | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_10_at_SFTPB_5end | |description=CAGE_peak_10_at_SFTPB_5end | ||
|id=chr2:85890508..85890534,- | |id=chr2:85890508..85890534,- | ||
|ontology_enrichment_celltype=CL:0002195!1.57e-09!2;CL:0002571!1.57e-09!2 | |ontology_enrichment_celltype=CL:0002195!1.57e-09!2;CL:0002571!1.57e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002188;3.35e-09;5!CL:1000746;6.21e-07;7!CL:1000612;6.21e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,3.49e-09,5;CL:1000746,6.39e-07,7;CL:1000612,6.39e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.69e-13;29!UBERON:0001041;9.49e-13;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002171!2.66e-18!1;UBERON:0006518!2.66e-18!1;UBERON:0008949!2.66e-18!1;UBERON:0000101!2.66e-18!1;UBERON:0002167!2.66e-18!1;UBERON:0002048!1.71e-12!22;UBERON:0000117!1.71e-12!22;UBERON:0000171!1.71e-12!22;UBERON:0000170!1.71e-12!22;UBERON:0005597!1.71e-12!22;UBERON:0000118!1.71e-12!22;UBERON:0005178!3.48e-08!34;UBERON:0002224!3.48e-08!34;UBERON:0005181!5.87e-08!35;UBERON:0005153!1.54e-07!37;UBERON:0008947!2.39e-07!38;UBERON:0003258!2.39e-07!38;UBERON:0005911!4.28e-07!82 | |ontology_enrichment_uberon=UBERON:0002171!2.66e-18!1;UBERON:0006518!2.66e-18!1;UBERON:0008949!2.66e-18!1;UBERON:0000101!2.66e-18!1;UBERON:0002167!2.66e-18!1;UBERON:0002048!1.71e-12!22;UBERON:0000117!1.71e-12!22;UBERON:0000171!1.71e-12!22;UBERON:0000170!1.71e-12!22;UBERON:0005597!1.71e-12!22;UBERON:0000118!1.71e-12!22;UBERON:0005178!3.48e-08!34;UBERON:0002224!3.48e-08!34;UBERON:0005181!5.87e-08!35;UBERON:0005153!1.54e-07!37;UBERON:0008947!2.39e-07!38;UBERON:0003258!2.39e-07!38;UBERON:0005911!4.28e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;6.62e-41;1!UBERON:0006518;6.62e-41;1!UBERON:0008949;6.62e-41;1!UBERON:0000101;6.62e-41;1!UBERON:0002167;6.62e-41;1!UBERON:0002048;4.60e-17;22!UBERON:0000117;4.60e-17;22!UBERON:0000171;4.60e-17;22!UBERON:0000170;4.60e-17;22!UBERON:0001052;3.60e-11;4!UBERON:0005178;3.58e-10;34!UBERON:0002224;3.58e-10;34!UBERON:0004907;3.35e-09;5!UBERON:0000065;3.06e-08;44!UBERON:0005181;4.10e-08;35!UBERON:0000074;6.21e-07;7!UBERON:0001229;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,6.62e-41,1;UBERON:0006518,6.62e-41,1;UBERON:0008949,6.62e-41,1;UBERON:0000101,6.62e-41,1;UBERON:0002167,6.62e-41,1;UBERON:0002048,4.60e-17,22;UBERON:0000117,4.60e-17,22;UBERON:0000171,4.60e-17,22;UBERON:0000170,4.60e-17,22;UBERON:0005597,4.60e-17,22;UBERON:0000118,4.60e-17,22;UBERON:0005178,2.39e-11,34;UBERON:0002224,2.39e-11,34;UBERON:0001052,3.42e-11,4;UBERON:0005181,4.78e-11,35;UBERON:0005153,1.71e-10,37;UBERON:0008947,3.08e-10,38;UBERON:0003258,3.08e-10,38;UBERON:0004907,3.22e-09,5;UBERON:0005157,2.00e-08,47;UBERON:0000915,1.10e-07,52;UBERON:0000065,1.99e-07,54;UBERON:0005177,6.20e-07,101;UBERON:0010532,6.39e-07,7;UBERON:0000074,6.39e-07,7;UBERON:0001229,6.39e-07,7;UBERON:0001230,6.39e-07,7;UBERON:0003220,6.39e-07,7;UBERON:0005749,6.39e-07,7;UBERON:0004199,6.39e-07,7;UBERON:0004209,6.39e-07,7;UBERON:0004198,6.39e-07,7 | |||
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|short_description=p10@SFTPB | |short_description=p10@SFTPB | ||
}} | }} |
Latest revision as of 17:11, 18 September 2015
Short description: | p10@SFTPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SFTPB_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | 66bp_to_ENST00000494165_5end |
EntrezGene: | SFTPB |
HGNC: | 10801 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 3.49e-09 | 5 |
glomerular cell | 6.39e-07 | 7 |
kidney corpuscule cell | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 6.62e-41 | 1 |
right lung lobe | 6.62e-41 | 1 |
lower lobe of lung | 6.62e-41 | 1 |
lobe of lung | 6.62e-41 | 1 |
right lung | 6.62e-41 | 1 |
lung | 4.60e-17 | 22 |
respiratory tube | 4.60e-17 | 22 |
respiration organ | 4.60e-17 | 22 |
pair of lungs | 4.60e-17 | 22 |
lung primordium | 4.60e-17 | 22 |
lung bud | 4.60e-17 | 22 |
thoracic cavity element | 2.39e-11 | 34 |
thoracic cavity | 2.39e-11 | 34 |
rectum | 3.42e-11 | 4 |
thoracic segment organ | 4.78e-11 | 35 |
epithelial bud | 1.71e-10 | 37 |
respiratory primordium | 3.08e-10 | 38 |
endoderm of foregut | 3.08e-10 | 38 |
lower digestive tract | 3.22e-09 | 5 |
epithelial fold | 2.00e-08 | 47 |
thoracic segment of trunk | 1.10e-07 | 52 |
respiratory tract | 1.99e-07 | 54 |
trunk region element | 6.20e-07 | 101 |
primitive nephron | 6.39e-07 | 7 |
renal glomerulus | 6.39e-07 | 7 |
renal corpuscle | 6.39e-07 | 7 |
glomerular capsule | 6.39e-07 | 7 |
metanephric mesenchyme | 6.39e-07 | 7 |
glomerular tuft | 6.39e-07 | 7 |
S-shaped body | 6.39e-07 | 7 |
renal vesicle | 6.39e-07 | 7 |
comma-shaped body | 6.39e-07 | 7 |