FFCP PHASE1:Hg19::chr10:11218151..11218170,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:11218151..11218170,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:11218151..11218170,+ | |description=CAGE_peak_at_chr10:11218151..11218170,+ | ||
|id=chr10:11218151..11218170,+ | |id=chr10:11218151..11218170,+ | ||
|ontology_enrichment_celltype=CL:0000557!8.40e-67!71;CL:0000766!1.19e-66!76;CL:0000839!1.71e-65!70;CL:0000763!8.47e-61!112;CL:0000049!8.47e-61!112;CL:0002009!6.15e-60!65;CL:0002194!7.87e-60!63;CL:0000576!7.87e-60!63;CL:0000040!7.87e-60!63;CL:0000559!7.87e-60!63;CL:0000738!4.85e-58!140;CL:0002057!3.36e-57!42;CL:0000037!3.59e-55!172;CL:0000566!3.59e-55!172;CL:0002032!1.06e-53!165;CL:0000837!1.06e-53!165;CL:0000860!1.75e-52!45;CL:0002031!1.91e-51!124;CL:0000988!8.63e-51!182;CL:0002087!3.08e-48!119;CL:0002393!8.47e-16!9;CL:0002397!8.47e-16!9;CL:0000134!3.42e-14!358;CL:0002320!1.70e-13!365;CL:0000219!4.57e-11!390;CL:0002274!1.53e-09!5;CL:0000457!1.53e-09!5;CL:0002191!1.53e-09!5;CL:0000097!1.53e-09!5;CL:0000831!1.53e-09!5;CL:0002028!1.53e-09!5;CL:0000034!8.45e-09!444;CL:0000048!3.02e-08!430;CL:0000723!7.42e-08!436 | |ontology_enrichment_celltype=CL:0000557!8.40e-67!71;CL:0000766!1.19e-66!76;CL:0000839!1.71e-65!70;CL:0000763!8.47e-61!112;CL:0000049!8.47e-61!112;CL:0002009!6.15e-60!65;CL:0002194!7.87e-60!63;CL:0000576!7.87e-60!63;CL:0000040!7.87e-60!63;CL:0000559!7.87e-60!63;CL:0000738!4.85e-58!140;CL:0002057!3.36e-57!42;CL:0000037!3.59e-55!172;CL:0000566!3.59e-55!172;CL:0002032!1.06e-53!165;CL:0000837!1.06e-53!165;CL:0000860!1.75e-52!45;CL:0002031!1.91e-51!124;CL:0000988!8.63e-51!182;CL:0002087!3.08e-48!119;CL:0002393!8.47e-16!9;CL:0002397!8.47e-16!9;CL:0000134!3.42e-14!358;CL:0002320!1.70e-13!365;CL:0000219!4.57e-11!390;CL:0002274!1.53e-09!5;CL:0000457!1.53e-09!5;CL:0002191!1.53e-09!5;CL:0000097!1.53e-09!5;CL:0000831!1.53e-09!5;CL:0002028!1.53e-09!5;CL:0000034!8.45e-09!444;CL:0000048!3.02e-08!430;CL:0000723!7.42e-08!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.78e-54;33!CL:0002057;2.78e-54;33!CL:0000473;8.39e-39;39!CL:0000234;8.39e-39;39!CL:0000576;7.96e-38;48!CL:0000766;2.00e-24;69!CL:0002393;2.94e-20;6!CL:0002397;2.94e-20;6!CL:0000763;6.07e-11;100!CL:0002087;6.46e-10;104!CL:0000738;1.61e-07;136!CL:0000097;6.18e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.87e-70,42;CL:0002057,3.87e-70,42;CL:0000473,1.98e-67,48;CL:0000234,1.98e-67,48;CL:0000839,4.07e-57,66;CL:0000557,3.18e-56,67;CL:0002194,2.99e-53,59;CL:0000576,2.99e-53,59;CL:0000040,2.99e-53,59;CL:0000559,2.99e-53,59;CL:0000766,4.01e-52,72;CL:0002009,2.03e-51,61;CL:0000763,1.10e-33,108;CL:0000049,1.10e-33,108;CL:0002031,6.64e-33,120;CL:0000738,1.30e-28,136;CL:0002087,1.39e-28,115;CL:0002032,1.34e-23,161;CL:0000837,1.34e-23,161;CL:0000037,1.84e-22,168;CL:0000988,3.98e-21,177;CL:0002393,1.05e-13,9;CL:0002397,1.05e-13,9;CL:0000134,1.46e-08,354;CL:0002320,2.59e-08,361;CL:0000219,1.93e-07,386;CL:0000097,6.37e-07,5;CL:0002028,6.37e-07,5;CL:0000034,7.48e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.16e-47;42!CL:0000049;5.06e-12;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.66e-57!80;UBERON:0001474!4.52e-52!86;UBERON:0002390!1.41e-51!102;UBERON:0003061!1.41e-51!102;UBERON:0002193!8.95e-49!112;UBERON:0002405!5.18e-42!115;UBERON:0004765!1.01e-41!101;UBERON:0001434!1.01e-41!101;UBERON:0002204!1.55e-18!167;UBERON:0003081!3.29e-16!216;UBERON:0002384!1.50e-12!375 | |ontology_enrichment_uberon=UBERON:0002371!2.66e-57!80;UBERON:0001474!4.52e-52!86;UBERON:0002390!1.41e-51!102;UBERON:0003061!1.41e-51!102;UBERON:0002193!8.95e-49!112;UBERON:0002405!5.18e-42!115;UBERON:0004765!1.01e-41!101;UBERON:0001434!1.01e-41!101;UBERON:0002204!1.55e-18!167;UBERON:0003081!3.29e-16!216;UBERON:0002384!1.50e-12!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.17e-49,76;UBERON:0001474,2.11e-45,82;UBERON:0004765,4.37e-41,90;UBERON:0002405,1.18e-39,93;UBERON:0002390,1.83e-37,98;UBERON:0003061,1.83e-37,98;UBERON:0001434,1.19e-36,100;UBERON:0002193,1.10e-33,108;UBERON:0002204,1.63e-20,167;UBERON:0003081,3.33e-16,203;UBERON:0000926,4.90e-09,315;UBERON:0004120,4.90e-09,315;UBERON:0006603,4.90e-09,315;UBERON:0002384,5.62e-08,371 | |||
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|short_description=p@chr10:11218151..11218170,+ | |short_description=p@chr10:11218151..11218170,+ | ||
}} | }} |
Latest revision as of 10:22, 23 July 2015
Short description: | p@chr10:11218151..11218170, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:11218151..11218170, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.87e-70 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.87e-70 | 42 |
defensive cell | 1.98e-67 | 48 |
phagocyte | 1.98e-67 | 48 |
myeloid lineage restricted progenitor cell | 4.07e-57 | 66 |
granulocyte monocyte progenitor cell | 3.18e-56 | 67 |
monopoietic cell | 2.99e-53 | 59 |
monocyte | 2.99e-53 | 59 |
monoblast | 2.99e-53 | 59 |
promonocyte | 2.99e-53 | 59 |
myeloid leukocyte | 4.01e-52 | 72 |
macrophage dendritic cell progenitor | 2.03e-51 | 61 |
myeloid cell | 1.10e-33 | 108 |
common myeloid progenitor | 1.10e-33 | 108 |
hematopoietic lineage restricted progenitor cell | 6.64e-33 | 120 |
leukocyte | 1.30e-28 | 136 |
nongranular leukocyte | 1.39e-28 | 115 |
hematopoietic oligopotent progenitor cell | 1.34e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.34e-23 | 161 |
hematopoietic stem cell | 1.84e-22 | 168 |
hematopoietic cell | 3.98e-21 | 177 |
intermediate monocyte | 1.05e-13 | 9 |
CD14-positive, CD16-positive monocyte | 1.05e-13 | 9 |
mesenchymal cell | 1.46e-08 | 354 |
connective tissue cell | 2.59e-08 | 361 |
motile cell | 1.93e-07 | 386 |
mast cell | 6.37e-07 | 5 |
basophil mast progenitor cell | 6.37e-07 | 5 |
stem cell | 7.48e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.17e-49 | 76 |
bone element | 2.11e-45 | 82 |
skeletal element | 4.37e-41 | 90 |
immune system | 1.18e-39 | 93 |
hematopoietic system | 1.83e-37 | 98 |
blood island | 1.83e-37 | 98 |
skeletal system | 1.19e-36 | 100 |
hemolymphoid system | 1.10e-33 | 108 |
musculoskeletal system | 1.63e-20 | 167 |
lateral plate mesoderm | 3.33e-16 | 203 |
mesoderm | 4.90e-09 | 315 |
mesoderm-derived structure | 4.90e-09 | 315 |
presumptive mesoderm | 4.90e-09 | 315 |
connective tissue | 5.62e-08 | 371 |