FFCP PHASE1:Hg19::chr17:46022728..46022773,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:46022728..46022773,+
|short_description=p@chr17:46022728..46022773,+
|description=CAGE_peak_at_chr17:46022728..46022773,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:46022728..46022773,+ | |||
|coexpression_cluster_id=C314 | |||
|description=CAGE_peak_at_chr17:46022728..46022773,+ | |||
|id=chr17:46022728..46022773,+ | |||
|ontology_enrichment_celltype=CL:0002194!3.18e-21!63;CL:0000576!3.18e-21!63;CL:0000040!3.18e-21!63;CL:0000559!3.18e-21!63;CL:0000839!3.56e-20!70;CL:0002009!4.72e-20!65;CL:0000557!1.21e-19!71;CL:0000766!5.74e-18!76;CL:0000763!1.59e-13!112;CL:0000049!1.59e-13!112;CL:0002087!7.57e-13!119;CL:0002031!9.61e-13!124;CL:0002057!1.72e-12!42;CL:0000860!1.07e-11!45;CL:0000738!3.20e-11!140;CL:0000037!5.73e-11!172;CL:0000566!5.73e-11!172;CL:0002032!2.60e-10!165;CL:0000837!2.60e-10!165;CL:0000988!3.30e-10!182 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.47e-20;6!CL:0002619;1.37e-10;3!CL:0000473;3.03e-08;39!CL:0000234;3.03e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.52e-20,6;CL:0002194,5.19e-20,59;CL:0000576,5.19e-20,59;CL:0000040,5.19e-20,59;CL:0000559,5.19e-20,59;CL:0002009,3.56e-19,61;CL:0000839,2.64e-17,66;CL:0000557,5.78e-17,67;CL:0000766,2.10e-15,72;CL:0000763,4.25e-14,108;CL:0000049,4.25e-14,108;CL:0002087,1.18e-11,115;CL:0002031,6.64e-11,120;CL:0000037,8.66e-11,168;CL:0002032,1.14e-10,161;CL:0000837,1.14e-10,161;CL:0002619,1.26e-10,3;CL:0000988,7.51e-10,177;CL:0000738,8.67e-10,136;CL:0000473,1.23e-09,48;CL:0000234,1.23e-09,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.13e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.91e-18!80;UBERON:0002390!2.52e-17!102;UBERON:0003061!2.52e-17!102;UBERON:0001474!9.39e-16!86;UBERON:0002193!9.40e-15!112;UBERON:0004765!2.08e-14!101;UBERON:0001434!2.08e-14!101;UBERON:0007023!2.08e-14!115;UBERON:0001049!7.73e-13!57;UBERON:0005068!7.73e-13!57;UBERON:0006241!7.73e-13!57;UBERON:0007135!7.73e-13!57;UBERON:0002405!1.54e-12!115;UBERON:0002204!1.83e-11!167;UBERON:0001017!6.15e-10!82;UBERON:0002780!6.96e-10!41;UBERON:0001890!6.96e-10!41;UBERON:0006240!6.96e-10!41;UBERON:0005743!1.45e-09!86;UBERON:0003080!1.89e-09!42;UBERON:0002616!3.33e-09!59;UBERON:0001893!3.70e-09!34;UBERON:0002020!7.09e-09!34;UBERON:0003528!7.09e-09!34;UBERON:0000955!1.11e-08!69;UBERON:0006238!1.11e-08!69;UBERON:0002791!1.54e-08!33;UBERON:0003075!1.62e-08!86;UBERON:0007284!1.62e-08!86;UBERON:0001869!7.36e-08!32;UBERON:0002346!1.32e-07!90;UBERON:0000073!1.75e-07!94;UBERON:0001016!1.75e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;7.98e-07;2!UBERON:0010225;7.98e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.86e-16,76;UBERON:0001474,2.98e-14,82;UBERON:0002405,3.56e-13,93;UBERON:0004765,1.76e-12,90;UBERON:0002390,3.36e-12,98;UBERON:0003061,3.36e-12,98;UBERON:0001434,1.13e-10,100;UBERON:0002193,1.57e-10,108;UBERON:0001897,6.50e-07,2;UBERON:0010225,6.50e-07,2 | |||
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| ||
|short_description=p@chr17:46022728..46022773,+ | |||
}} | }} |
Latest revision as of 17:58, 25 July 2015
Short description: | p@chr17:46022728..46022773, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:46022728..46022773, + |
Coexpression cluster: | C314_Macrophage_Dendritic_Monocytederived_CD14_Esophageal_Mast_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.52e-20 | 6 |
monopoietic cell | 5.19e-20 | 59 |
monocyte | 5.19e-20 | 59 |
monoblast | 5.19e-20 | 59 |
promonocyte | 5.19e-20 | 59 |
macrophage dendritic cell progenitor | 3.56e-19 | 61 |
myeloid lineage restricted progenitor cell | 2.64e-17 | 66 |
granulocyte monocyte progenitor cell | 5.78e-17 | 67 |
myeloid leukocyte | 2.10e-15 | 72 |
myeloid cell | 4.25e-14 | 108 |
common myeloid progenitor | 4.25e-14 | 108 |
nongranular leukocyte | 1.18e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 6.64e-11 | 120 |
hematopoietic stem cell | 8.66e-11 | 168 |
hematopoietic oligopotent progenitor cell | 1.14e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-10 | 161 |
adult endothelial progenitor cell | 1.26e-10 | 3 |
hematopoietic cell | 7.51e-10 | 177 |
leukocyte | 8.67e-10 | 136 |
defensive cell | 1.23e-09 | 48 |
phagocyte | 1.23e-09 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.86e-16 | 76 |
bone element | 2.98e-14 | 82 |
immune system | 3.56e-13 | 93 |
skeletal element | 1.76e-12 | 90 |
hematopoietic system | 3.36e-12 | 98 |
blood island | 3.36e-12 | 98 |
skeletal system | 1.13e-10 | 100 |
hemolymphoid system | 1.57e-10 | 108 |
dorsal plus ventral thalamus | 6.50e-07 | 2 |
thalamic complex | 6.50e-07 | 2 |